C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00082N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1508 VISTA 9606 7:135472160-136074488
GeneTranscriptPositionBiotype
ENSG00000105887 (MTPN)
myotrophin 		ENST00000393085 (MTPN-001) 135926761-135977316 protein_coding
ENST00000435723 (MTPN-002) 135929459-135977353 protein_coding
ENSG00000155561 (NUP205)
nucleoporin 205kDa 		ENST00000285968 (NUP205-001) 135557919-135648757 protein_coding
ENST00000461255 (NUP205-008) 135635315-135648757 retained_intron
ENST00000462316 (NUP205-011) 135597239-135601450 retained_intron
ENST00000463247 (NUP205-012) 135606871-135616701 nonsense_mediated_decay
ENST00000472132 (NUP205-015) 135606149-135615997 protein_coding
ENST00000477620 (NUP205-007) 135619814-135648724 nonsense_mediated_decay
ENST00000489493 (NUP205-010) 135557932-135573777 processed_transcript
ENST00000490439 (NUP205-013) 135644899-135648725 nonsense_mediated_decay
ENST00000491089 (NUP205-014) 135646025-135648749 retained_intron
ENST00000607647 (NUP205-016) 135597740-135648757 retained_intron
ENSG00000164707 (SLC13A4)
solute carrier family 13 (sodium/sulfate symporter), member 4 		ENST00000354042 (SLC13A4-001) 135681237-135728186 protein_coding
ENST00000378428 (SLC13A4-007) 135708141-135729226 protein_coding
ENST00000422620 (SLC13A4-008) 135721393-135729258 protein_coding
ENST00000471405 (SLC13A4-002) 135681241-135728204 retained_intron
ENST00000478310 (SLC13A4-003) 135707437-135728174 retained_intron
ENST00000480376 (SLC13A4-004) 135699364-135705807 retained_intron
ENST00000491630 (SLC13A4-006) 135681237-135685685 processed_transcript
ENSG00000189320 (FAM180A)
family with sequence similarity 180, member A 		ENST00000338588 (FAM180A-201) 135729599-135748846 protein_coding
ENST00000415751 (FAM180A-003) 135733556-135748712 protein_coding
ENST00000435869 (FAM180A-002) 135728348-135748813 processed_transcript
ENST00000444083 (FAM180A-001) 135729607-135748619 nonsense_mediated_decay
ENSG00000199700 (RNU6-223P)
RNA, U6 small nuclear 223, pseudogene 		ENST00000362830 (RNU6-223P-201) 135960703-135960809 snRNA
ENSG00000212303 (RNU6-1154P)
RNA, U6 small nuclear 1154, pseudogene 		ENST00000391001 (RNU6-1154P-201) 135665599-135665702 snRNA
ENSG00000223718 (AC093107.7)
 ENST00000422772 (AC093107.7-001) 135660039-135660647 processed_pseudogene
ENSG00000224746 (AC015987.1)
 ENST00000419211 (AC015987.1-001) 135926455-135932881 antisense
ENSG00000230649 (AC024084.1)
 ENST00000440744 (AC024084.1-001) 136025761-136084668 lincRNA
ENSG00000243317 (C7orf73)
chromosome 7 open reading frame 73 		ENST00000422968 (C7orf73-002) 135662564-135693418 processed_transcript
ENST00000507606 (C7orf73-001) 135662521-135676412 protein_coding
ENST00000509448 (C7orf73-004) 135662496-135691873 nonsense_mediated_decay
ENST00000515197 (C7orf73-003) 135662514-135673288 retained_intron
ENSG00000271414 (RP11-751K21.1)
 ENST00000603668 (RP11-751K21.1-001) 135650972-135651416 processed_pseudogene
ENSG00000274268 (AC024084.2)
 ENST00000612799 (AC024084.2-201) 136052813-136052917 miRNA
CIL_00082N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1508 VISTA 10090 6:35053329-35655339
GeneTranscriptPositionBiotype
ENSMUSG00000029840 (Mtpn)
myotrophin 		ENSMUST00000031866 (Mtpn-001) 35508906-35539888 protein_coding
ENSMUSG00000029843 (Slc13a4)
solute carrier family 13 (sodium/sulfate symporters), member 4 		ENSMUST00000031868 (Slc13a4-001) 35267957-35308131 protein_coding
ENSMUST00000122829 (Slc13a4-002) 35286503-35308129 retained_intron
ENSMUST00000155366 (Slc13a4-003) 35280320-35288174 retained_intron
ENSMUSG00000038759 (Nup205)
nucleoporin 205 		ENSMUST00000043815 (Nup205-201) 35177430-35247449 protein_coding
ENSMUST00000170234 (Nup205-202) 35177629-35247590 protein_coding
ENSMUSG00000038784 (Cnot4)
CCR4-NOT transcription complex, subunit 4 		ENSMUST00000044163 (Cnot4-201) 35042709-35133737 protein_coding
ENSMUST00000114989 (Cnot4-202) 35022066-35133737 protein_coding
ENSMUST00000114993 (Cnot4-203) 35022066-35133737 protein_coding
ENSMUSG00000047420 (Fam180a)
family with sequence similarity 180, member A 		ENSMUST00000051176 (Fam180a-201) 35312746-35326141 protein_coding
ENSMUSG00000073155 (1810058I24Rik)
RIKEN cDNA 1810058I24 gene 		ENSMUST00000130875 (1810058I24Rik-003) 35252716-35261637 lincRNA
ENSMUST00000136110 (1810058I24Rik-002) 35252732-35262022 lincRNA
ENSMUST00000152147 (1810058I24Rik-001) 35252654-35263496 lincRNA
ENSMUSG00000087808 (Gm23435)
predicted gene, 23435 		ENSMUST00000157183 (Gm23435-201) 35243595-35243750 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00082N_0001ENSG00000105887ENST00000393085ENST00000435723ENSG00000155561ENST00000285968ENST00000461255ENST00000472132ENST00000477620ENST00000607647ENSG00000164707ENST00000354042ENST00000471405ENSG00000189320ENST00000338588ENST00000415751ENST00000435869ENST00000444083ENSG00000199700ENST00000362830ENSG00000212303ENST00000391001ENSG00000223718ENST00000422772ENSG00000224746ENST00000419211ENSG00000230649ENST00000440744ENSG00000243317ENST00000422968ENST00000507606ENSG00000271414ENST00000603668ENSG00000274268ENST00000612799CIL_00082N_0002ENSMUSG00000029840ENSMUST00000031866ENSMUSG00000029843ENSMUST00000031868ENSMUST00000122829ENSMUST00000155366ENSMUSG00000038759ENSMUST00000043815ENSMUST00000170234ENSMUSG00000038784ENSMUST00000044163ENSMUST00000114989ENSMUST00000114993ENSMUSG00000047420ENSMUST00000051176ENSMUSG00000073155ENSMUST00000130875ENSMUST00000136110ENSMUST00000152147ENSMUSG00000087808ENSMUST00000157183
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105887 ENST00000393085 35.966±0.00 20.054±0.00 5.864±0.00 41.790±8.36 20.426±6.09 20.190±9.37 12.406±8.06 15.979±8.03 11.386±1.53 27.637±11.92 9.461±5.46 17.035±4.89 20.255±4.48 26.541±7.50
ENST00000435723 N/A N/A 3.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155561 ENST00000285968 3.532±0.00 2.925±0.00 0.572±0.00 1.108±0.22 1.583±0.00 2.664±0.07 0.903±0.05 2.321±0.67 1.232±0.67 2.133±0.65 1.395±0.83 5.278±1.83 3.539±0.08 3.100±0.74
ENST00000461255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.841±0.00 3.582±0.00 3.854±0.06 N/A
ENST00000462316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472132 N/A N/A 4.832±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477620 2.644±0.00 6.613±0.00 N/A 2.442±0.00 3.186±0.00 2.708±0.00 1.323±0.00 5.162±0.00 1.955±0.00 3.513±0.00 1.732±0.00 3.882±0.00 N/A 6.587±0.00
ENST00000489493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607647 N/A N/A 0.406±0.00 N/A 1.157±0.00 1.241±0.00 N/A N/A N/A 1.340±0.00 N/A N/A N/A N/A
ENSG00000164707 ENST00000354042 N/A N/A N/A 3.929±2.41 N/A N/A N/A N/A N/A N/A N/A N/A 45.335±35.58 4.063±0.00
ENST00000378428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471405 N/A N/A N/A N/A 0.163±0.00 0.228±0.00 N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A
ENST00000478310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189320 ENST00000338588 N/A N/A N/A N/A 0.790±0.38 0.458±0.00 3.012±2.59 N/A 2.210±0.00 1.764±0.00 N/A 0.550±0.17 0.276±0.00 0.102±0.00
ENST00000415751 N/A 0.362±0.00 0.751±0.00 0.056±0.00 0.447±0.00 N/A N/A 1.262±0.00 2.061±0.00 0.756±0.33 0.959±0.00 0.714±0.00 0.086±0.02 N/A
ENST00000435869 N/A N/A 0.212±0.00 N/A N/A 0.637±0.00 N/A N/A 1.004±0.00 N/A N/A N/A 0.075±0.00 0.066±0.00
ENST00000444083 0.900±0.00 0.131±0.00 N/A 0.057±0.00 0.709±0.00 1.151±0.04 N/A 1.928±0.41 N/A N/A 0.499±0.00 0.168±0.00 0.068±0.00 0.917±0.00
ENSG00000199700 ENST00000362830 N/A 0.378±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212303 ENST00000391001 N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000223718 ENST00000422772 0.074±0.00 0.258±0.00 N/A 0.082±0.00 0.026±0.00 0.120±0.00 0.046±0.00 0.103±0.00 N/A 0.117±0.00 0.197±0.00 0.092±0.06 0.087±0.00 0.328±0.00
ENSG00000224746 ENST00000419211 N/A N/A 1.733±0.00 0.087±0.00 0.050±0.00 0.029±0.00 0.216±0.00 0.086±0.00 N/A N/A 0.462±0.00 0.049±0.00 0.117±0.07 0.239±0.01
ENSG00000230649 ENST00000440744 N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A 0.224±0.01
ENSG00000243317 ENST00000422968 N/A N/A N/A N/A 0.492±0.00 1.078±0.00 N/A 0.872±0.00 N/A 0.786±0.00 N/A N/A N/A N/A
ENST00000507606 7.334±0.00 7.408±0.00 3.911±0.00 5.852±1.28 6.522±3.02 4.058±1.63 5.810±4.39 7.142±3.62 3.955±1.54 4.665±1.48 4.388±2.45 7.179±4.34 13.985±0.05 13.741±1.72
ENST00000509448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271414 ENST00000603668 N/A 0.189±0.00 N/A 0.213±0.00 N/A N/A N/A 0.149±0.00 N/A N/A N/A 0.373±0.00 N/A 0.122±0.04
ENSG00000274268 ENST00000612799 N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029840 ENSMUST00000031866 26.947±5.15 66.725±3.16 13.355±0.37 13.514±0.91 25.783±8.84 30.055±1.74 8.259±0.71 21.334±4.37 20.830±6.13 31.629±3.25 3.676±1.10 28.835±11.11 20.149±11.43 7.062±3.12
ENSMUSG00000029843 ENSMUST00000031868 0.451±0.00 0.544±0.30 N/A 1.203±0.44 0.469±0.13 0.045±0.03 0.136±0.03 0.513±0.17 0.041±0.01 2.150±0.34 0.037±0.02 0.212±0.14 38.152±31.88 0.468±0.18
ENSMUST00000122829 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.02 N/A N/A N/A N/A N/A
ENSMUST00000155366 N/A N/A 0.168±0.00 4.585±0.00 N/A N/A N/A N/A 0.066±0.00 N/A 0.071±0.00 N/A 130.027±75.97 6.248±0.00
ENSMUSG00000038759 ENSMUST00000043815 8.197±3.15 5.781±0.74 3.628±0.27 6.838±3.49 5.925±1.28 4.052±0.52 2.491±0.43 3.543±0.53 4.865±3.44 5.232±0.93 1.314±0.53 11.544±2.50 10.412±6.31 32.179±14.88
ENSMUST00000170234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.213±0.00
ENSMUSG00000038784 ENSMUST00000044163 0.835±0.27 N/A 0.735±0.08 1.154±0.65 0.946±0.07 0.712±0.00 0.509±0.05 0.806±0.01 0.517±0.07 1.119±0.06 0.594±0.22 0.992±0.36 0.561±0.38 N/A
ENSMUST00000114989 0.662±0.14 0.858±0.08 N/A 1.286±0.00 3.006±1.81 N/A 0.731±0.10 1.099±0.16 1.379±0.09 N/A 0.983±0.29 1.716±0.00 0.865±0.34 N/A
ENSMUST00000114993 3.828±0.91 4.010±0.40 2.961±0.00 4.102±1.87 3.631±1.77 4.104±0.56 2.716±0.31 4.434±1.38 3.584±1.07 2.672±0.28 2.230±0.60 4.926±1.63 4.228±1.02 26.901±9.68
ENSMUSG00000047420 ENSMUST00000051176 0.598±0.28 0.563±0.31 0.867±0.22 0.261±0.29 0.994±0.29 0.234±0.11 0.095±0.04 0.256±0.09 0.068±0.04 0.711±0.25 0.195±0.07 2.417±1.88 0.446±0.44 0.146±0.11
ENSMUSG00000073155 ENSMUST00000130875 90.623±22.23 49.978±17.95 45.116±7.48 19.573±9.96 74.640±32.91 40.912±5.69 84.116±24.11 85.431±8.05 69.195±15.60 40.007±8.24 28.140±4.29 61.487±22.06 56.922±26.04 21.571±8.85
ENSMUST00000136110 11.534±0.61 97.629±16.93 N/A N/A 61.404±12.72 11.874±2.82 N/A N/A 11.826±4.89 27.239±5.72 2.158±0.31 33.126±14.25 5.709±1.20 N/A
ENSMUST00000152147 10.908±1.04 5.840±0.30 11.460±0.95 5.267±3.14 8.060±1.78 2.551±0.15 12.790±3.36 10.953±1.33 10.658±3.14 6.942±0.54 3.460±0.27 7.110±1.93 5.305±3.32 3.980±1.79
ENSMUSG00000087808 ENSMUST00000157183 N/A N/A N/A 6.758±0.00 N/A N/A N/A N/A 3.859±0.00 N/A N/A 1.988±0.00 N/A N/A

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