C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000834_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs382 VISTA 9606 19:29775043-30376109
GeneTranscriptPositionBiotype
ENSG00000105173 (CCNE1)
cyclin E1 		ENST00000262643 (CCNE1-001) 29811898-29824308 protein_coding
ENST00000357943 (CCNE1-201) 29812654-29824308 protein_coding
ENST00000444983 (CCNE1-002) 29812654-29824212 protein_coding
ENST00000574121 (CCNE1-003) 29821732-29824280 retained_intron
ENST00000575243 (CCNE1-004) 29812004-29821768 protein_coding
ENST00000576532 (CCNE1-005) 29817203-29824010 protein_coding
ENST00000586912 (CCNE1-006) 29812725-29813331 retained_intron
ENSG00000105176 (URI1)
URI1, prefoldin-like chaperone 		ENST00000360605 (URI1-003) 29923644-30015695 protein_coding
ENST00000392271 (URI1-001) 29942251-30016608 protein_coding
ENST00000570564 (URI1-005) 29923657-29986377 protein_coding
ENST00000570704 (URI1-007) 29983233-30007579 processed_transcript
ENST00000573052 (URI1-010) 30012423-30015026 protein_coding
ENST00000574110 (URI1-002) 29942261-30015704 nonsense_mediated_decay
ENST00000574176 (URI1-008) 30004295-30009019 processed_transcript
ENST00000574233 (URI1-012) 29923691-30005436 protein_coding
ENST00000574666 (URI1-006) 29942311-30005706 nonsense_mediated_decay
ENST00000574766 (URI1-004) 29923712-29937997 processed_transcript
ENST00000575242 (URI1-009) 30009080-30012899 protein_coding
ENST00000576442 (URI1-011) 29971093-30007547 protein_coding
ENST00000585655 (URI1-014) 29923734-29925897 protein_coding
ENSG00000198597 (ZNF536)
zinc finger protein 536 		ENST00000355537 (ZNF536-004) 30372412-30558059 protein_coding
ENST00000585628 (ZNF536-003) 30228514-30548468 protein_coding
ENST00000590564 (ZNF536-001) 30228290-30300669 processed_transcript
ENST00000591488 (ZNF536-002) 30228554-30443978 protein_coding
ENST00000592773 (ZNF536-005) 30549346-30713538 protein_coding
ENSG00000242100 (RPL9P32)
ribosomal protein L9 pseudogene 32 		ENST00000464118 (RPL9P32-001) 29956369-29956988 processed_pseudogene
ENSG00000266910 (CTC-448F2.6)
 ENST00000587506 (CTC-448F2.6-001) 30037423-30038156 processed_pseudogene
ENSG00000267006 (CTC-448F2.4)
 ENST00000588402 (CTC-448F2.4-001) 30028741-30029916 lincRNA
ENSG00000267258 (CTC-448F2.3)
 ENST00000585753 (CTC-448F2.3-001) 29921182-29921653 processed_pseudogene
ENSG00000267692 (TAF9P3)
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa pseudogene 3 		ENST00000585464 (TAF9P3-001) 30037285-30037411 processed_pseudogene
ENSG00000278895 (CTC-448F2.7)
 ENST00000624591 (CTC-448F2.7-001) 29915862-29917830 TEC
CIL_000834_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs382 VISTA 10090 7:37604895-38205961
GeneTranscriptPositionBiotype
ENSMUSG00000002068 (Ccne1)
cyclin E1 		ENSMUST00000108023 (Ccne1-001) 38097984-38107534 protein_coding
ENSMUST00000124979 (Ccne1-002) 38106279-38107502 retained_intron
ENSMUST00000128785 (Ccne1-004) 38098668-38099501 retained_intron
ENSMUST00000130329 (Ccne1-003) 38100658-38106908 protein_coding
ENSMUST00000137097 (Ccne1-005) 38098811-38099369 processed_transcript
ENSMUSG00000030421 (Uri1)
URI1, prefoldin-like chaperone 		ENSMUST00000085513 (Uri1-001) 37960002-38019542 protein_coding
ENSMUSG00000043456 (Zfp536)
zinc finger protein 536 		ENSMUST00000056338 (Zfp536-001) 37479109-37769962 protein_coding
ENSMUST00000175941 (Zfp536-003) 37479104-37769624 protein_coding
ENSMUST00000176114 (Zfp536-004) 37479122-37770980 protein_coding
ENSMUST00000176129 (Zfp536-002) 37472135-37479986 protein_coding
ENSMUST00000176137 (Zfp536-006) 37710068-37773577 processed_transcript
ENSMUST00000176205 (Zfp536-005) 37479177-37772875 protein_coding
ENSMUST00000176297 (Zfp536-007) 37716318-37773562 retained_intron
ENSMUST00000176534 (Zfp536-008) 37569629-37773641 protein_coding
ENSMUST00000176680 (Zfp536-009) 37569499-37770782 protein_coding
ENSMUSG00000054676 (1600014C10Rik)
RIKEN cDNA 1600014C10 gene 		ENSMUST00000067854 (1600014C10Rik-201) 38183787-38197563 protein_coding
ENSMUST00000165308 (1600014C10Rik-202) 38183217-38197563 protein_coding
ENSMUST00000177983 (1600014C10Rik-007) 38183848-38188956 protein_coding
ENSMUST00000178207 (1600014C10Rik-001) 38183217-38197568 processed_transcript
ENSMUST00000178876 (1600014C10Rik-003) 38183653-38197568 processed_transcript
ENSMUST00000178890 (1600014C10Rik-004) 38183240-38183899 processed_transcript
ENSMUST00000179503 (1600014C10Rik-006) 38186289-38195266 processed_transcript
ENSMUST00000179525 (1600014C10Rik-002) 38183261-38196592 processed_transcript
ENSMUST00000179992 (1600014C10Rik-005) 38183898-38194972 processed_transcript
ENSMUSG00000093540 (4930505M18Rik)
RIKEN cDNA 4930505M18 gene 		ENSMUST00000175854 (4930505M18Rik-001) 37669799-37672228 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000834_0001ENSG00000105173ENST00000262643ENST00000357943ENST00000444983ENST00000574121ENST00000575243ENST00000576532ENSG00000105176ENST00000360605ENST00000392271ENST00000574110ENST00000575242ENSG00000198597ENST00000355537ENST00000585628ENST00000591488ENST00000592773ENSG00000242100ENST00000464118ENSG00000266910ENST00000587506ENSG00000267006ENST00000588402ENSG00000267258ENST00000585753ENSG00000267692ENST00000585464ENSG00000278895ENST00000624591CIL_000834_0002ENSMUSG00000002068ENSMUST00000108023ENSMUST00000124979ENSMUST00000128785ENSMUST00000130329ENSMUST00000137097ENSMUSG00000030421ENSMUST00000085513ENSMUSG00000043456ENSMUST00000056338ENSMUST00000175941ENSMUST00000176114ENSMUST00000176129ENSMUST00000176205ENSMUST00000176534ENSMUSG00000054676ENSMUST00000067854ENSMUST00000165308ENSMUST00000177983ENSMUST00000178876ENSMUST00000179503ENSMUST00000179525ENSMUST00000179992ENSMUSG00000093540ENSMUST00000175854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105173 ENST00000262643 0.274±0.00 N/A N/A 0.364±0.26 0.147±0.01 0.299±0.00 0.467±0.00 N/A N/A 0.314±0.00 N/A 8.821±6.43 26.825±6.00 2.629±1.17
ENST00000357943 0.284±0.00 N/A N/A N/A N/A 0.768±0.00 N/A N/A N/A N/A N/A 7.905±8.18 4.133±0.00 1.455±0.00
ENST00000444983 0.239±0.00 0.283±0.00 N/A 0.508±0.03 0.334±0.07 N/A 0.440±0.17 0.452±0.00 0.039±0.00 N/A 0.592±0.00 23.142±7.70 24.217±0.00 2.735±0.91
ENST00000574121 N/A 0.561±0.00 N/A N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A 24.814±0.00 N/A 2.904±0.00
ENST00000575243 N/A N/A N/A 0.728±0.00 0.482±0.19 N/A 0.656±0.00 0.241±0.00 0.137±0.09 0.137±0.00 N/A 10.124±0.00 N/A N/A
ENST00000576532 N/A N/A N/A N/A N/A 0.396±0.00 0.084±0.00 N/A 0.114±0.00 0.183±0.00 0.089±0.00 N/A N/A 1.578±0.00
ENST00000586912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000105176 ENST00000360605 N/A 6.347±0.00 2.661±0.00 5.326±0.56 6.327±0.15 4.775±0.00 3.562±0.26 5.774±0.78 7.267±0.00 2.865±0.00 8.338±3.93 23.861±13.23 6.636±5.30 24.103±8.44
ENST00000392271 N/A N/A N/A 1.399±0.00 2.161±0.00 N/A N/A N/A N/A 0.921±0.00 N/A 3.821±1.72 1.144±0.15 N/A
ENST00000570564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574110 15.731±0.00 15.882±0.00 1.774±0.00 6.934±2.76 9.640±7.74 11.518±6.19 6.033±4.28 8.234±5.22 6.480±2.02 6.761±5.73 14.179±0.00 24.573±13.83 7.095±2.71 19.064±4.48
ENST00000574176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575242 N/A N/A 1.643±0.00 N/A 5.385±0.00 3.809±0.00 2.092±0.00 N/A 4.224±0.00 4.637±0.00 N/A N/A N/A N/A
ENST00000576442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198597 ENST00000355537 N/A 0.123±0.00 N/A 5.506±4.18 N/A 0.835±0.00 0.178±0.05 0.039±0.00 N/A 0.012±0.00 0.025±0.00 0.026±0.02 N/A 0.724±0.12
ENST00000585628 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 0.192±0.00 N/A N/A N/A
ENST00000590564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591488 N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A
ENST00000592773 N/A 0.091±0.00 N/A 2.281±1.08 0.026±0.00 0.368±0.17 N/A 0.013±0.00 0.094±0.09 0.037±0.02 N/A 0.021±0.01 0.011±0.00 0.632±0.21
ENSG00000242100 ENST00000464118 N/A 0.383±0.00 N/A 0.043±0.00 0.272±0.00 0.868±0.00 0.019±0.00 0.106±0.00 N/A 0.040±0.02 0.111±0.00 0.411±0.36 N/A 0.057±0.00
ENSG00000266910 ENST00000587506 0.871±0.00 1.571±0.00 0.280±0.00 0.917±0.00 1.224±0.18 0.431±0.40 0.064±0.00 0.326±0.02 0.352±0.34 0.269±0.00 0.275±0.00 2.009±1.22 0.154±0.13 0.213±0.02
ENSG00000267006 ENST00000588402 0.014±0.00 0.070±0.00 N/A 0.074±0.02 0.006±0.00 0.199±0.00 0.014±0.01 0.071±0.00 0.035±0.00 N/A 0.050±0.00 0.029±0.01 N/A 0.023±0.01
ENSG00000267258 ENST00000585753 0.031±0.00 0.097±0.00 N/A 0.102±0.00 0.033±0.00 0.030±0.00 0.029±0.00 0.162±0.00 N/A 0.062±0.00 0.028±0.00 0.064±0.00 N/A 0.120±0.06
ENSG00000267692 ENST00000585464 1.371±0.00 2.217±0.00 N/A 0.326±0.00 2.538±0.00 N/A N/A N/A N/A N/A N/A 2.994±1.02 N/A 1.120±0.00
ENSG00000278895 ENST00000624591 0.186±0.00 0.807±0.00 0.346±0.00 0.368±0.02 0.653±0.40 0.307±0.24 0.260±0.02 0.215±0.14 0.439±0.35 0.348±0.17 0.080±0.06 0.497±0.23 0.146±0.06 0.628±0.47
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002068 ENSMUST00000108023 3.382±0.34 0.628±0.20 1.421±0.16 5.517±1.84 2.107±0.67 1.706±0.63 0.265±0.13 0.327±0.16 26.171±29.36 0.431±0.09 0.116±0.06 2.352±0.85 18.274±20.26 2.701±0.49
ENSMUST00000124979 N/A 7.113±2.42 N/A N/A 6.271±2.08 2.254±0.97 N/A N/A 0.211±0.09 0.391±0.06 N/A 4.552±1.08 N/A N/A
ENSMUST00000128785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A
ENSMUST00000130329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.04 N/A 1.428±0.00 N/A
ENSMUST00000137097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.07 N/A N/A N/A
ENSMUSG00000030421 ENSMUST00000085513 6.438±2.09 12.684±6.29 11.152±0.99 9.169±1.18 5.383±1.87 5.101±1.52 2.431±0.50 4.861±0.37 4.682±0.50 6.928±1.78 9.919±0.50 12.236±3.07 7.626±2.85 9.276±8.81
ENSMUSG00000043456 ENSMUST00000056338 N/A 0.305±0.09 N/A 2.234±0.51 N/A 0.187±0.02 0.318±0.00 0.079±0.00 N/A 0.051±0.01 N/A N/A N/A N/A
ENSMUST00000175941 N/A 0.293±0.06 N/A N/A 0.103±0.00 0.288±0.05 N/A N/A 0.005±0.00 N/A 0.090±0.00 N/A N/A N/A
ENSMUST00000176114 0.042±0.03 0.330±0.03 N/A N/A 0.108±0.04 0.180±0.00 0.307±0.06 0.017±0.00 0.006±0.00 0.042±0.03 0.042±0.02 0.358±0.17 0.023±0.01 0.300±0.15
ENSMUST00000176129 0.035±0.01 N/A 3.041±1.36 2.958±0.10 0.149±0.05 N/A 0.234±0.02 0.057±0.03 0.018±0.01 0.099±0.04 0.105±0.03 0.251±0.13 0.031±0.02 0.281±0.00
ENSMUST00000176137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176205 N/A N/A N/A 3.325±1.66 N/A 0.573±0.18 N/A N/A N/A 0.056±0.00 0.021±0.00 0.056±0.00 N/A 0.561±0.16
ENSMUST00000176297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176534 N/A N/A N/A N/A 0.275±0.00 N/A N/A N/A 0.014±0.00 N/A 0.141±0.04 N/A N/A N/A
ENSMUST00000176680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054676 ENSMUST00000067854 5.841±0.04 4.142±1.70 8.734±1.70 4.642±2.85 6.420±1.93 2.769±1.06 4.347±0.68 5.805±1.64 4.117±3.63 4.920±0.67 2.112±0.39 5.216±1.95 4.435±0.37 0.663±0.19
ENSMUST00000165308 5.584±0.00 2.327±0.08 N/A N/A N/A N/A N/A N/A 14.045±0.00 N/A N/A 1.343±0.00 N/A N/A
ENSMUST00000177983 N/A N/A N/A N/A N/A 14.935±5.12 N/A N/A 183.097±30.24 N/A N/A N/A N/A N/A
ENSMUST00000178207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178876 N/A N/A N/A N/A 8.183±0.00 1.859±0.52 N/A N/A N/A N/A N/A N/A N/A 0.540±0.00
ENSMUST00000178890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179503 N/A N/A N/A N/A N/A 6.371±2.35 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179525 28.973±15.55 15.289±2.00 18.211±0.15 1.545±0.00 28.983±6.32 3.798±1.60 10.776±1.36 7.950±3.82 40.990±31.34 5.807±0.48 7.212±0.76 7.009±2.78 10.660±2.93 0.923±0.30
ENSMUST00000179992 N/A N/A N/A N/A N/A 4.209±0.00 N/A N/A N/A N/A N/A N/A N/A 6.196±0.53
ENSMUSG00000093540 ENSMUST00000175854 N/A N/A 0.014±0.01 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A 1.789±0.64

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