C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000855_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1715 VISTA 9606 8:33733685-34335220
GeneTranscriptPositionBiotype
ENSG00000188512 (RP1-273G13.2)
 ENST00000523393 (RP1-273G13.2-001) 33969567-33969879 processed_pseudogene
ENSG00000215264 (RPL10AP3)
ribosomal protein L10a pseudogene 3 		ENST00000462503 (RPL10AP3-001) 34322992-34323642 processed_pseudogene
ENSG00000240738 (RP1-273G13.1)
 ENST00000468681 (RP1-273G13.1-001) 33859480-33860223 processed_pseudogene
ENSG00000253108 (RP1-84O15.2)
 ENST00000522460 (RP1-84O15.2-001) 34228439-34346731 lincRNA
ENSG00000253642 (RP11-317N12.1)
 ENST00000517292 (RP11-317N12.1-004) 33755777-33796436 lincRNA
ENST00000521541 (RP11-317N12.1-002) 34007856-34038923 lincRNA
ENST00000523063 (RP11-317N12.1-003) 33604856-34038485 lincRNA
ENST00000523336 (RP11-317N12.1-001) 34007857-34039008 lincRNA
ENSG00000254033 (RP11-431M3.2)
 ENST00000518178 (RP11-431M3.2-001) 34229294-34248946 lincRNA
ENSG00000254302 (RP11-431M3.1)
 ENST00000518217 (RP11-431M3.1-001) 34174886-34184895 lincRNA

Homo sapiens Ensembl (GRCh38)

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_000855_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1715 VISTA 10090 8:30347939-30949074
GeneTranscriptPositionBiotype
ENSMUSG00000097044 (4933433F19Rik)
RIKEN cDNA 4933433F19 gene 		ENSMUST00000180571 (4933433F19Rik-001) 30568393-30575573 lincRNA

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000855_0001ENSG00000188512ENST00000523393ENSG00000215264ENST00000462503ENSG00000240738ENST00000468681ENSG00000253108ENST00000522460ENSG00000253642ENST00000517292ENST00000521541ENST00000523063ENST00000523336ENSG00000254033ENST00000518178ENSG00000254302ENST00000518217CIL_000855_0002ENSMUSG00000097044ENSMUST00000180571
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000855_0001ENSG00000188512ENST00000523393ENSG00000215264ENST00000462503ENSG00000240738ENST00000468681ENSG00000253108ENST00000522460ENSG00000253642ENST00000517292ENST00000521541ENST00000523063ENST00000523336ENSG00000254033ENST00000518178ENSG00000254302ENST00000518217CIL_000855_0002ENSMUSG00000097044ENSMUST00000180571
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000188512 ENST00000523393 N/A 0.048±0.00 N/A N/A N/A 0.132±0.00 0.141±0.00 N/A 0.046±0.00 0.043±0.00 0.077±0.00 N/A 0.203±0.05
ENSG00000215264 ENST00000462503 N/A 0.158±0.00 N/A N/A 0.050±0.00 N/A N/A N/A N/A 0.068±0.00 N/A N/A 0.024±0.00
ENSG00000240738 ENST00000468681 0.197±0.00 0.106±0.00 0.109±0.00 0.480±0.01 0.080±0.00 0.038±0.00 0.021±0.00 0.056±0.00 0.020±0.00 0.092±0.00 0.082±0.00 N/A 0.168±0.00
ENSG00000253108 ENST00000522460 N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A 0.030±0.00 N/A 0.132±0.00
ENSG00000253642 ENST00000517292 N/A N/A 0.600±0.00 0.583±0.00 N/A 0.305±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000521541 0.252±0.00 0.581±0.00 0.818±0.00 0.390±0.00 N/A N/A 0.075±0.00 0.018±0.00 0.075±0.00 N/A N/A 0.490±0.00 0.992±0.00
ENST00000523063 0.060±0.00 N/A N/A 0.090±0.00 0.223±0.00 N/A 0.029±0.00 N/A N/A 0.260±0.00 0.023±0.00 N/A N/A
ENST00000523336 N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A N/A N/A 0.021±0.00 0.091±0.00 0.398±0.00
ENSG00000254033 ENST00000518178 0.031±0.00 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A 0.257±0.00
ENSG00000254302 ENST00000518217 0.042±0.00 0.065±0.00 N/A 0.021±0.00 0.541±0.52 0.019±0.00 N/A N/A 0.177±0.00 N/A N/A 0.069±0.00 0.604±0.45
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000097044 ENSMUST00000180571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.13

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