C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000885_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs942 VISTA 9606 6:49858801-50460250
GeneTranscriptPositionBiotype
ENSG00000124812 (CRISP1)
cysteine-rich secretory protein 1 		ENST00000329411 (CRISP1-201) 49834271-49857403 protein_coding
ENST00000335847 (CRISP1-001) 49834257-49866528 protein_coding
ENST00000505118 (CRISP1-002) 49834860-49877096 protein_coding
ENST00000507853 (CRISP1-003) 49834257-49866499 protein_coding
ENSG00000177684 (DEFB114)
defensin, beta 114 		ENST00000322066 (DEFB114-001) 49960249-49964105 protein_coding
ENSG00000203970 (DEFB110)
defensin, beta 110 locus 		ENST00000371148 (DEFB110-002) 50018843-50021981 protein_coding
ENST00000393660 (DEFB110-001) 50009138-50021935 protein_coding
ENSG00000214642 (DEFB113)
defensin, beta 113 		ENST00000398718 (DEFB113-001) 49968677-49969625 protein_coding
ENSG00000226733 (RP11-397G17.1)
 ENST00000415106 (RP11-397G17.1-001) 50093711-50099282 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000885_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs942 VISTA 10090 1:18088788-18690258
GeneTranscriptPositionBiotype
ENSMUSG00000025774 (Crisp4)
cysteine-rich secretory protein 4 		ENSMUST00000026876 (Crisp4-001) 18115191-18145902 protein_coding
ENSMUST00000115340 (Crisp4-201) 18115204-18137051 protein_coding
ENSMUST00000115344 (Crisp4-002) 18115600-18145902 protein_coding
ENSMUST00000130669 (Crisp4-003) 18115191-18145896 retained_intron
ENSMUSG00000067773 (Defb41)
defensin beta 41 		ENSMUST00000088463 (Defb41-002) 18250980-18265138 protein_coding
ENSMUST00000097817 (Defb41-001) 18260524-18265080 protein_coding
ENSMUSG00000073735 (Defb18)
defensin beta 18 		ENSMUST00000097818 (Defb18-001) 18236473-18237443 protein_coding
ENSMUSG00000101685 (RP24-108N24.2)
predicted gene, 17837 		ENSMUST00000186435 (RP24-108N24.2-001) 18262395-18263379 processed_pseudogene
ENSMUSG00000101738 (RP24-108N24.1)
predicted gene 29006 		ENSMUST00000187966 (RP24-108N24.1-001) 18307824-18313906 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000885_0001ENSG00000124812ENST00000329411ENST00000335847ENST00000505118ENST00000507853ENSG00000177684ENST00000322066ENSG00000203970ENST00000371148ENST00000393660ENSG00000214642ENST00000398718ENSG00000226733ENST00000415106CIL_000885_0002ENSMUSG00000025774ENSMUST00000026876ENSMUST00000115340ENSMUST00000115344ENSMUST00000130669ENSMUSG00000067773ENSMUST00000088463ENSMUST00000097817ENSMUSG00000073735ENSMUST00000097818ENSMUSG00000101685ENSMUST00000186435ENSMUSG00000101738ENSMUST00000187966
Region; Gene Transcript'; AdiposeAdrenalBladderBrainKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000885_0001ENSG00000124812ENST00000329411ENST00000335847ENST00000505118ENST00000507853ENSG00000177684ENST00000322066ENSG00000203970ENST00000371148ENSG00000214642ENST00000398718ENSG00000226733ENST00000415106CIL_000885_0002ENSMUSG00000025774ENSMUST00000026876ENSMUST00000115340ENSMUST00000115344ENSMUSG00000067773ENSMUST00000088463ENSMUST00000097817ENSMUSG00000073735ENSMUST00000097818ENSMUSG00000101685ENSMUST00000186435ENSMUSG00000101738ENSMUST00000187966
Gene Transcript Adipose Adrenal Bladder Brain Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124812 ENST00000329411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.320±0.00
ENST00000335847 N/A N/A N/A N/A N/A 0.612±0.00 N/A N/A N/A N/A N/A
ENST00000505118 0.099±0.00 0.060±0.00 N/A 0.016±0.00 N/A 0.520±0.00 N/A N/A N/A N/A 0.679±0.00
ENST00000507853 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177684 ENST00000322066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.170±1.06
ENSG00000203970 ENST00000371148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.626±0.00
ENST00000393660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214642 ENST00000398718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.158±0.00
ENSG00000226733 ENST00000415106 N/A N/A 7.829±0.00 N/A 3.646±2.30 0.426±0.00 0.012±0.00 N/A 0.040±0.00 N/A 0.564±0.00
Gene Transcript Adipose Adrenal Bladder Brain Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025774 ENSMUST00000026876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00
ENSMUST00000115340 0.037±0.00 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A
ENSMUST00000115344 0.082±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000067773 ENSMUST00000088463 0.189±0.00 N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A 0.145±0.00 0.410±0.24
ENSMUST00000097817 N/A N/A N/A N/A N/A N/A N/A 0.509±0.00 N/A N/A N/A
ENSMUSG00000073735 ENSMUST00000097818 1.128±0.54 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 1.230±0.00
ENSMUSG00000101685 ENSMUST00000186435 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A
ENSMUSG00000101738 ENSMUST00000187966 N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A 0.069±0.00

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