C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00088P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs824 VISTA 9606 18:74555716-75157326
GeneTranscriptPositionBiotype
ENSG00000150656 (CNDP1)
carnosine dipeptidase 1 (metallopeptidase M20 family) 		ENST00000358821 (CNDP1-001) 74534440-74585025 protein_coding
ENST00000578498 (CNDP1-010) 74574764-74576577 processed_transcript
ENST00000582365 (CNDP1-004) 74534602-74587212 protein_coding
ENST00000582461 (CNDP1-011) 74576280-74585011 retained_intron
ENST00000584004 (CNDP1-006) 74567154-74585025 retained_intron
ENST00000584316 (CNDP1-009) 74560963-74576735 nonsense_mediated_decay
ENST00000585136 (CNDP1-008) 74534503-74567321 processed_transcript
ENSG00000215421 (ZNF407)
zinc finger protein 407 		ENST00000299687 (ZNF407-001) 74631020-75065669 protein_coding
ENST00000309902 (ZNF407-201) 74630963-74804624 protein_coding
ENST00000577538 (ZNF407-006) 74631020-74921058 protein_coding
ENST00000579200 (ZNF407-003) 75061282-75065671 retained_intron
ENST00000581829 (ZNF407-005) 74877205-74898443 protein_coding
ENST00000582214 (ZNF407-007) 75060155-75063485 processed_transcript
ENST00000582337 (ZNF407-002) 74597870-74804627 protein_coding
ENST00000584235 (ZNF407-004) 74877198-74905938 protein_coding
ENSG00000264247 (LINC00909)
long intergenic non-protein coding RNA 909 		ENST00000577806 (LINC00909-004) 74593201-74597569 lincRNA
ENST00000580048 (LINC00909-001) 74591774-74597824 lincRNA
ENST00000581192 (LINC00909-002) 74593696-74598508 lincRNA
ENST00000585279 (LINC00909-003) 74593149-74597800 lincRNA
ENSG00000273669 (RP11-405M12.4)
 ENST00000613588 (RP11-405M12.4-001) 75073543-75074205 lincRNA
ENSG00000278607 (RP11-405M12.3)
 ENST00000618730 (RP11-405M12.3-001) 75070197-75071091 lincRNA
ENSG00000278911 (RP11-405M12.2)
 ENST00000624305 (RP11-405M12.2-001) 75103587-75106260 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_00088P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs824 VISTA 10090 18:84072054-84673645
GeneTranscriptPositionBiotype
ENSMUSG00000024644 (Cndp2)
CNDP dipeptidase 2 (metallopeptidase M20 family) 		ENSMUST00000025546 (Cndp2-201) 84667470-84685633 protein_coding
ENSMUST00000168419 (Cndp2-202) 84667470-84681996 protein_coding
ENSMUSG00000046982 (Tshz1)
teashirt zinc finger family member 1 		ENSMUST00000060303 (Tshz1-001) 84011627-84086404 protein_coding
ENSMUST00000175783 (Tshz1-002) 84012082-84086390 processed_transcript
ENSMUSG00000049090 (Zadh2)
zinc binding alcohol dehydrogenase, domain containing 2 		ENSMUST00000060223 (Zadh2-201) 84088158-84097514 protein_coding
ENSMUSG00000056162 (Cndp1)
carnosine dipeptidase 1 (metallopeptidase M20 family) 		ENSMUST00000070139 (Cndp1-001) 84610509-84650084 protein_coding
ENSMUST00000130579 (Cndp1-003) 84630859-84649946 retained_intron
ENSMUST00000145981 (Cndp1-002) 84628691-84650046 retained_intron
ENSMUSG00000092056 (Gm7289)
predicted gene 7289 		ENSMUST00000168993 (Gm7289-001) 84658932-84659844 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088P_0001ENSG00000150656ENST00000358821ENST00000578498ENST00000582365ENST00000582461ENST00000584004ENST00000584316ENST00000585136ENSG00000215421ENST00000299687ENST00000309902ENST00000577538ENST00000579200ENST00000581829ENST00000582214ENST00000582337ENST00000584235ENSG00000264247ENST00000577806ENST00000580048ENST00000581192ENST00000585279ENSG00000273669ENST00000613588ENSG00000278607ENST00000618730ENSG00000278911ENST00000624305CIL_00088P_0002ENSMUSG00000024644ENSMUST00000025546ENSMUST00000168419ENSMUSG00000046982ENSMUST00000060303ENSMUST00000175783ENSMUSG00000049090ENSMUST00000060223ENSMUSG00000056162ENSMUST00000070139ENSMUST00000130579ENSMUST00000145981ENSMUSG00000092056ENSMUST00000168993
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088P_0001ENSG00000150656ENST00000358821ENST00000578498ENST00000582365ENST00000582461ENST00000584004ENST00000584316ENSG00000215421ENST00000299687ENST00000309902ENST00000577538ENST00000582337ENSG00000264247ENST00000577806ENST00000580048ENST00000581192ENST00000585279ENSG00000273669ENST00000613588ENSG00000278607ENST00000618730ENSG00000278911ENST00000624305CIL_00088P_0002ENSMUSG00000024644ENSMUST00000025546ENSMUST00000168419ENSMUSG00000046982ENSMUST00000060303ENSMUST00000175783ENSMUSG00000049090ENSMUST00000060223ENSMUSG00000056162ENSMUST00000070139ENSMUST00000130579ENSMUST00000145981ENSMUSG00000092056ENSMUST00000168993
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150656 ENST00000358821 N/A N/A N/A 35.263±23.01 N/A N/A N/A 6.063±5.72 3.631±0.00 N/A N/A N/A N/A 0.200±0.00
ENST00000578498 0.174±0.00 N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A 0.127±0.00 0.210±0.00 N/A N/A N/A
ENST00000582365 0.004±0.00 0.100±0.00 N/A 8.455±5.17 0.081±0.00 N/A 0.018±0.00 0.076±0.00 0.060±0.00 N/A 0.016±0.00 0.025±0.01 0.019±0.00 0.169±0.13
ENST00000582461 0.006±0.00 N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A 0.033±0.00 N/A 0.015±0.01 N/A 0.094±0.00
ENST00000584004 N/A N/A N/A N/A N/A N/A N/A 3.143±2.87 3.200±0.00 N/A 0.031±0.00 0.020±0.00 N/A 0.098±0.00
ENST00000584316 N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.548±0.00
ENST00000585136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215421 ENST00000299687 0.639±0.00 N/A 0.432±0.00 1.321±0.42 0.464±0.05 0.793±0.35 0.521±0.18 0.864±0.00 0.449±0.00 0.719±0.26 1.334±0.00 0.610±0.19 0.386±0.19 1.476±0.78
ENST00000309902 N/A N/A N/A 0.340±0.00 0.714±0.00 0.938±0.00 N/A N/A 1.776±0.00 N/A N/A 1.325±0.00 N/A N/A
ENST00000577538 N/A N/A N/A N/A N/A 3.242±0.00 0.600±0.00 N/A 1.326±0.00 N/A N/A 0.714±0.00 N/A N/A
ENST00000579200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582337 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.620±0.00 N/A N/A N/A N/A
ENST00000584235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264247 ENST00000577806 N/A 2.246±0.00 N/A 1.405±0.00 N/A 0.851±0.00 N/A 0.559±0.00 N/A N/A N/A 1.579±0.28 0.606±0.14 0.609±0.00
ENST00000580048 0.578±0.00 1.319±0.00 0.409±0.00 1.101±0.62 0.715±0.19 0.457±0.01 0.802±0.11 1.076±0.69 0.471±0.04 0.270±0.01 0.747±0.00 1.422±0.74 0.763±0.21 0.993±0.01
ENST00000581192 N/A N/A 1.436±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585279 N/A N/A N/A 1.431±0.00 N/A N/A 0.906±0.43 1.597±0.13 0.700±0.00 0.469±0.13 N/A 0.823±0.00 0.620±0.00 N/A
ENSG00000273669 ENST00000613588 0.529±0.00 1.791±0.00 N/A 0.855±0.00 0.131±0.00 0.497±0.00 0.057±0.00 0.248±0.00 0.321±0.00 0.419±0.00 N/A 0.178±0.08 0.447±0.13 0.486±0.00
ENSG00000278607 ENST00000618730 N/A N/A N/A N/A 0.038±0.00 N/A 0.105±0.00 1.686±0.00 0.034±0.00 0.073±0.00 N/A 0.357±0.00 0.401±0.00 0.102±0.00
ENSG00000278911 ENST00000624305 0.037±0.00 0.099±0.00 0.160±0.00 0.273±0.05 0.038±0.00 0.110±0.00 0.058±0.00 0.119±0.00 0.011±0.00 0.097±0.00 0.027±0.00 0.012±0.00 0.022±0.00 0.035±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024644 ENSMUST00000025546 10.708±3.63 6.153±1.57 20.113±3.45 16.037±1.55 7.115±4.34 9.741±3.14 6.027±2.10 54.374±14.09 11.744±3.67 13.343±1.19 6.449±1.33 30.447±9.06 29.517±9.54 10.102±4.09
ENSMUST00000168419 33.288±14.93 2.082±0.58 9.241±0.51 N/A 12.952±4.31 10.079±3.97 1.187±0.18 24.969±5.79 4.671±1.54 13.820±0.46 1.717±0.68 17.807±6.84 51.526±55.27 N/A
ENSMUSG00000046982 ENSMUST00000060303 2.878±1.38 2.657±0.51 4.169±0.15 3.269±0.52 1.048±0.40 2.965±0.65 1.483±0.34 2.131±0.28 0.722±0.31 2.156±0.27 1.629±0.51 6.443±4.09 1.242±0.62 0.585±0.11
ENSMUST00000175783 6.580±3.70 10.426±1.64 4.801±2.26 4.265±2.47 4.307±1.61 12.647±1.48 4.066±0.64 4.900±2.46 1.589±0.85 5.871±0.23 0.576±0.24 22.650±8.83 1.234±0.71 0.835±0.31
ENSMUSG00000049090 ENSMUST00000060223 24.513±5.53 43.363±3.86 18.854±2.99 3.964±0.47 22.292±2.24 19.062±0.99 17.420±1.24 16.636±1.19 17.139±11.84 14.456±0.50 13.277±0.84 31.709±4.02 3.282±1.77 2.976±1.44
ENSMUSG00000056162 ENSMUST00000070139 0.196±0.14 N/A 0.011±0.01 0.023±0.02 0.043±0.02 0.027±0.00 N/A 4.537±0.61 0.007±0.01 N/A 0.016±0.00 0.551±0.42 0.197±0.11 0.017±0.01
ENSMUST00000130579 0.101±0.06 0.048±0.02 N/A 0.029±0.00 0.012±0.00 N/A N/A N/A 0.055±0.04 0.041±0.00 0.011±0.00 0.158±0.08 0.009±0.00 0.020±0.01
ENSMUST00000145981 1.029±0.18 N/A 0.012±0.00 0.021±0.00 0.105±0.08 0.060±0.00 N/A 4.632±0.19 0.037±0.00 N/A N/A 1.443±0.61 0.101±0.07 N/A
ENSMUSG00000092056 ENSMUST00000168993 N/A N/A 0.049±0.01 0.035±0.00 N/A N/A N/A 0.200±0.00 0.064±0.04 N/A N/A 0.275±0.26 0.148±0.15 0.098±0.00

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