C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00088V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm43 VISTA 9606 7:78307657-78911855
GeneTranscriptPositionBiotype
ENSG00000226230 (AC007237.2)
 ENST00000442074 (AC007237.2-001) 78486530-78487028 processed_pseudogene
ENSG00000231322 (RPL13AP17)
ribosomal protein L13a pseudogene 17 		ENST00000414782 (RPL13AP17-004) 78347214-78350556 retained_intron
ENST00000421208 (RPL13AP17-001) 78358292-78358872 transcribed_processed_pseudogene
ENST00000428436 (RPL13AP17-003) 78347236-78350529 retained_intron
ENST00000450028 (RPL13AP17-002) 78347142-78359458 processed_transcript
ENSG00000235751 (MAGI2-IT1)
MAGI2 intronic transcript 1 (non-protein coding) 		ENST00000440555 (MAGI2-IT1-001) 78901275-79000298 sense_intronic
CIL_00088V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm43 VISTA 10090 5:19779132-20382788
GeneTranscriptPositionBiotype
ENSMUSG00000077171 (Gm25761)
predicted gene, 25761 		ENSMUST00000103983 (Gm25761-201) 20114320-20114447 snoRNA
ENSMUSG00000087768 (Gm22755)
predicted gene, 22755 		ENSMUST00000157143 (Gm22755-201) 20264341-20264440 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryTestisCIL_00088V_0001ENSG00000226230ENST00000442074ENSG00000231322ENST00000414782ENST00000421208ENST00000428436ENST00000450028ENSG00000235751ENST00000440555CIL_00088V_0002ENSMUSG00000077171ENSMUST00000103983ENSMUSG00000087768ENSMUST00000157143
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryTestisCIL_00088V_0001ENSG00000226230ENST00000442074ENSG00000231322ENST00000414782ENST00000421208ENST00000428436ENST00000450028ENSG00000235751ENST00000440555CIL_00088V_0002ENSMUSG00000077171ENSMUST00000103983ENSMUSG00000087768ENSMUST00000157143
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENSG00000226230 ENST00000442074 N/A N/A 0.259±0.00 0.629±0.50 N/A 0.187±0.00 0.446±0.00 0.601±0.00 N/A N/A N/A
ENSG00000231322 ENST00000414782 N/A N/A N/A 0.088±0.00 N/A 0.384±0.00 0.088±0.00 N/A N/A 0.327±0.00 N/A
ENST00000421208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00
ENST00000428436 N/A N/A N/A 0.458±0.00 N/A N/A N/A 0.554±0.00 N/A N/A N/A
ENST00000450028 N/A N/A 0.223±0.00 0.022±0.00 0.082±0.00 0.033±0.00 N/A 0.094±0.00 0.218±0.11 0.143±0.00 0.014±0.00
ENSG00000235751 ENST00000440555 0.018±0.00 0.035±0.00 N/A 0.070±0.00 0.065±0.00 N/A N/A 0.132±0.00 N/A N/A 0.191±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENSMUSG00000077171 ENSMUST00000103983 N/A N/A N/A 5.216±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087768 ENSMUST00000157143 N/A N/A N/A 26.385±0.00 N/A N/A N/A N/A N/A N/A N/A

Loading