C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00089G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm87 VISTA 9606 6:104925514-105527976
GeneTranscriptPositionBiotype
ENSG00000085377 (PREP)
prolyl endopeptidase 		ENST00000369110 (PREP-001) 105277565-105403084 protein_coding
ENST00000448705 (PREP-002) 105322255-105323768 protein_coding
ENSG00000112276 (BVES)
blood vessel epicardial substance 		ENST00000314641 (BVES-003) 105096822-105137174 protein_coding
ENST00000336775 (BVES-001) 105100613-105136685 protein_coding
ENST00000446408 (BVES-002) 105100831-105136348 protein_coding
ENSG00000132429 (POPDC3)
popeye domain containing 3 		ENST00000254765 (POPDC3-001) 105158280-105179860 protein_coding
ENST00000429112 (POPDC3-004) 105158581-105160121 protein_coding
ENST00000474760 (POPDC3-002) 105158360-105179995 processed_transcript
ENST00000489134 (POPDC3-003) 105158300-105163765 processed_transcript
ENSG00000187772 (LIN28B)
lin-28 homolog B (C. elegans) 		ENST00000345080 (LIN28B-001) 104957048-105083332 protein_coding
ENSG00000203809 (LINC00577)
long intergenic non-protein coding RNA 577 		ENST00000369123 (LINC00577-001) 104936294-104940527 lincRNA
ENSG00000216639 (RP3-355L5.3)
 ENST00000404904 (RP3-355L5.3-001) 105298149-105298895 processed_pseudogene
ENSG00000219902 (RPL35P3)
ribosomal protein L35 pseudogene 3 		ENST00000403133 (RPL35P3-001) 105302453-105302823 processed_pseudogene
ENSG00000221544 (AL359709.1)
 ENST00000408617 (AL359709.1-201) 105181149-105181232 miRNA
ENSG00000231628 (RP3-355L5.4)
 ENST00000452363 (RP3-355L5.4-001) 105279016-105281755 antisense
ENSG00000272102 (RP3-355L5.5)
 ENST00000606817 (RP3-355L5.5-001) 105273220-105273760 lincRNA
CIL_00089G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm87 VISTA 10090 10:44928613-45531786
GeneTranscriptPositionBiotype
ENSMUSG00000019848 (Popdc3)
popeye domain containing 3 		ENSMUST00000019994 (Popdc3-001) 45289305-45318452 protein_coding
ENSMUST00000161803 (Popdc3-002) 45289402-45318117 protein_coding
ENSMUST00000175658 (Popdc3-003) 45178098-45315114 protein_coding
ENSMUSG00000019849 (Prep)
prolyl endopeptidase 		ENSMUST00000099858 (Prep-201) 45067206-45158997 protein_coding
ENSMUSG00000063804 (Lin28b)
lin-28 homolog B (C. elegans) 		ENSMUST00000079390 (Lin28b-201) 45376620-45470201 protein_coding
ENSMUSG00000071317 (Bves)
blood vessel epicardial substance 		ENSMUST00000095715 (Bves-201) 45335762-45369708 protein_coding
ENSMUSG00000077591 (Gm26016)
predicted gene, 26016 		ENSMUST00000104403 (Gm26016-201) 45268603-45268731 snoRNA
ENSMUSG00000095168 (Gm4795)
predicted pseudogene 4795 		ENSMUST00000095717 (Gm4795-001) 45006110-45007117 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00089G_0001ENSG00000085377ENST00000369110ENST00000448705ENSG00000112276ENST00000314641ENST00000336775ENST00000446408ENSG00000132429ENST00000254765ENST00000429112ENST00000474760ENST00000489134ENSG00000187772ENST00000345080ENSG00000203809ENST00000369123ENSG00000216639ENST00000404904ENSG00000219902ENST00000403133ENSG00000221544ENST00000408617ENSG00000231628ENST00000452363ENSG00000272102ENST00000606817CIL_00089G_0002ENSMUSG00000019848ENSMUST00000019994ENSMUST00000161803ENSMUST00000175658ENSMUSG00000019849ENSMUST00000099858ENSMUSG00000063804ENSMUST00000079390ENSMUSG00000071317ENSMUST00000095715ENSMUSG00000077591ENSMUST00000104403ENSMUSG00000095168ENSMUST00000095717
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00089G_0001ENSG00000085377ENST00000369110ENSG00000112276ENST00000314641ENST00000336775ENST00000446408ENSG00000132429ENST00000254765ENST00000429112ENST00000474760ENST00000489134ENSG00000187772ENST00000345080ENSG00000203809ENST00000369123ENSG00000216639ENST00000404904ENSG00000219902ENST00000403133ENSG00000221544ENST00000408617ENSG00000231628ENST00000452363ENSG00000272102ENST00000606817CIL_00089G_0002ENSMUSG00000019848ENSMUST00000019994ENSMUST00000161803ENSMUST00000175658ENSMUSG00000019849ENSMUST00000099858ENSMUSG00000063804ENSMUST00000079390ENSMUSG00000071317ENSMUST00000095715ENSMUSG00000077591ENSMUST00000104403ENSMUSG00000095168ENSMUST00000095717
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085377 ENST00000369110 8.434±0.00 6.416±0.00 1.661±0.00 7.108±2.04 10.627±0.00 9.900±0.98 4.325±3.39 5.169±3.20 4.626±2.96 4.280±1.66 16.407±7.65 16.572±9.10 14.865±1.58 12.509±0.91
ENST00000448705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000112276 ENST00000314641 1.563±0.00 1.215±0.00 0.106±0.00 0.976±0.82 0.862±0.19 3.730±3.37 10.870±6.86 0.012±0.00 4.122±0.00 N/A 11.384±6.14 0.054±0.00 N/A 2.640±1.16
ENST00000336775 N/A N/A 0.345±0.00 N/A N/A 0.981±0.00 2.948±0.00 N/A N/A 0.574±0.00 6.977±0.00 0.514±0.00 N/A 2.463±0.00
ENST00000446408 N/A N/A N/A 0.441±0.00 1.433±0.00 N/A N/A 0.258±0.00 3.554±0.00 N/A N/A N/A N/A N/A
ENSG00000132429 ENST00000254765 0.056±0.00 0.238±0.00 N/A 1.496±0.00 2.433±0.00 0.183±0.00 7.039±5.28 0.053±0.00 N/A N/A 21.083±12.12 0.066±0.00 0.202±0.03 2.083±0.25
ENST00000429112 0.093±0.00 0.193±0.00 N/A N/A N/A N/A N/A N/A 1.366±0.00 N/A N/A N/A N/A N/A
ENST00000474760 0.032±0.00 N/A N/A 3.495±2.23 2.381±0.00 0.184±0.00 3.184±1.30 0.063±0.00 0.258±0.00 0.237±0.00 24.909±6.03 0.229±0.04 0.437±0.21 1.930±0.57
ENST00000489134 N/A N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A 0.139±0.00 5.454±0.00 N/A N/A N/A
ENSG00000187772 ENST00000345080 N/A N/A N/A 0.107±0.04 N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A 13.058±0.00 1.232±0.06
ENSG00000203809 ENST00000369123 N/A N/A N/A 0.260±0.14 N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A
ENSG00000216639 ENST00000404904 N/A 0.051±0.00 N/A N/A N/A 0.057±0.00 0.071±0.00 0.131±0.00 N/A N/A 0.044±0.00 0.059±0.00 0.067±0.02 0.051±0.00
ENSG00000219902 ENST00000403133 0.253±0.00 0.277±0.00 0.547±0.00 0.432±0.20 0.346±0.12 0.137±0.00 0.063±0.00 0.295±0.00 0.062±0.00 0.069±0.00 0.419±0.00 0.638±0.72 N/A 0.312±0.00
ENSG00000221544 ENST00000408617 N/A 0.218±0.00 N/A N/A 0.383±0.00 N/A N/A 0.820±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000231628 ENST00000452363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.098±0.00 N/A N/A N/A
ENSG00000272102 ENST00000606817 0.223±0.00 0.441±0.00 N/A 0.380±0.33 0.356±0.00 0.239±0.05 0.095±0.00 N/A 0.017±0.00 0.190±0.00 0.162±0.13 0.340±0.08 0.194±0.00 0.301±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019848 ENSMUST00000019994 0.122±0.03 0.105±0.05 2.561±0.10 0.155±0.10 1.740±0.93 N/A 4.231±0.60 0.096±0.02 0.027±0.02 2.933±0.64 10.963±1.25 0.130±0.08 0.665±1.04 0.024±0.01
ENSMUST00000161803 N/A 0.075±0.04 1.222±0.33 0.105±0.02 0.499±0.14 0.071±0.04 1.570±0.44 0.087±0.03 0.015±0.00 0.962±0.35 8.529±1.46 0.131±0.09 0.200±0.26 0.077±0.00
ENSMUST00000175658 N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.122±0.00 N/A N/A N/A 0.173±0.04 N/A 0.030±0.01
ENSMUSG00000019849 ENSMUST00000099858 18.709±7.74 42.081±2.66 19.134±0.24 19.476±9.68 15.692±4.73 21.147±1.00 12.583±1.64 12.843±0.86 15.794±3.11 44.465±4.62 7.401±0.95 27.541±7.30 44.357±17.52 3.522±1.42
ENSMUSG00000063804 ENSMUST00000079390 N/A 0.082±0.00 0.025±0.00 3.690±1.85 N/A 0.028±0.00 0.013±0.00 0.017±0.01 2.115±1.19 N/A 0.007±0.00 0.054±0.06 0.206±0.13 0.916±0.49
ENSMUSG00000071317 ENSMUST00000095715 0.250±0.00 0.074±0.03 13.399±0.89 0.384±0.09 2.174±1.61 2.917±1.22 13.357±1.18 0.155±0.10 0.042±0.02 1.197±0.24 21.610±2.94 4.853±2.69 0.871±1.04 0.262±0.11
ENSMUSG00000077591 ENSMUST00000104403 N/A N/A N/A N/A N/A N/A 818.990±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095168 ENSMUST00000095717 0.029±0.00 0.053±0.00 0.014±0.00 0.003±0.00 0.160±0.00 0.065±0.00 N/A 0.051±0.02 0.118±0.08 0.064±0.03 0.055±0.00 0.128±0.05 0.028±0.01 0.051±0.02

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