C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008A0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2052 VISTA 9606 1:229844601-230448319
GeneTranscriptPositionBiotype
ENSG00000143641 (GALNT2)
polypeptide N-acetylgalactosaminyltransferase 2 		ENST00000366672 (GALNT2-001) 230067209-230282124 protein_coding
ENST00000485438 (GALNT2-002) 230255358-230282120 processed_transcript
ENST00000488903 (GALNT2-005) 230067259-230092033 processed_transcript
ENST00000492568 (GALNT2-003) 230261951-230264972 processed_transcript
ENST00000494106 (GALNT2-004) 230057990-230243427 processed_transcript
ENSG00000177614 (PGBD5)
piggyBac transposable element derived 5 		ENST00000391860 (PGBD5-001) 230314482-230425729 protein_coding
ENST00000525115 (PGBD5-002) 230323248-230377645 protein_coding
ENST00000530424 (PGBD5-003) 230323542-230336295 processed_transcript
ENSG00000224407 (RP5-956O18.3)
 ENST00000414640 (RP5-956O18.3-001) 230280312-230281893 antisense
ENSG00000227006 (RP5-956O18.2)
 ENST00000440729 (RP5-956O18.2-001) 230258694-230268483 antisense
ENSG00000227043 (RP11-286M16.1)
 ENST00000435973 (RP11-286M16.1-001) 229875550-229885752 lincRNA
ENSG00000228058 (RP11-552D4.1)
 ENST00000445339 (RP11-552D4.1-001) 230002730-230007162 lincRNA
CIL_0008A0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2052 VISTA 10090 8:123980149-124582109
GeneTranscriptPositionBiotype
ENSMUSG00000031979 (Cog2)
component of oligomeric golgi complex 2 		ENSMUST00000034460 (Cog2-001) 124520767-124552008 protein_coding
ENSMUST00000108803 (Cog2-003) 124520805-124545774 retained_intron
ENSMUST00000129977 (Cog2-002) 124535209-124544393 retained_intron
ENSMUST00000176159 (Cog2-004) 124520804-124529931 nonsense_mediated_decay
ENSMUST00000176279 (Cog2-005) 124520819-124529903 nonsense_mediated_decay
ENSMUSG00000031980 (Agt)
angiotensinogen (serpin peptidase inhibitor, clade A, member 8) 		ENSMUST00000063278 (Agt-201) 124556534-124569706 protein_coding
ENSMUSG00000031981 (Capn9)
calpain 9 		ENSMUST00000093033 (Capn9-001) 124576111-124618731 protein_coding
ENSMUST00000133086 (Capn9-002) 124576113-124591725 protein_coding
ENSMUST00000133583 (Capn9-003) 124613440-124614626 processed_transcript
ENSMUSG00000050751 (Pgbd5)
piggyBac transposable element derived 5 		ENSMUST00000052580 (Pgbd5-201) 124369049-124433936 protein_coding
ENSMUST00000128312 (Pgbd5-004) 124371869-124375546 processed_transcript
ENSMUST00000136892 (Pgbd5-002) 124370023-124393216 protein_coding
ENSMUST00000140012 (Pgbd5-001) 124369053-124434338 protein_coding
ENSMUST00000140126 (Pgbd5-005) 124371885-124375111 retained_intron
ENSMUST00000172566 (Pgbd5-003) 124369049-124439658 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008A0_0001ENSG00000143641ENST00000366672ENST00000485438ENST00000488903ENST00000492568ENST00000494106ENSG00000177614ENST00000391860ENST00000525115ENST00000530424ENSG00000224407ENST00000414640ENSG00000227006ENST00000440729ENSG00000227043ENST00000435973ENSG00000228058ENST00000445339CIL_0008A0_0002ENSMUSG00000031979ENSMUST00000034460ENSMUST00000108803ENSMUST00000129977ENSMUST00000176159ENSMUST00000176279ENSMUSG00000031980ENSMUST00000063278ENSMUSG00000031981ENSMUST00000093033ENSMUST00000133086ENSMUST00000133583ENSMUSG00000050751ENSMUST00000052580ENSMUST00000128312ENSMUST00000136892ENSMUST00000140012ENSMUST00000140126ENSMUST00000172566
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008A0_0001ENSG00000143641ENST00000366672ENST00000485438ENSG00000177614ENST00000391860ENST00000525115ENST00000530424ENSG00000224407ENST00000414640ENSG00000227006ENST00000440729ENSG00000227043ENST00000435973ENSG00000228058ENST00000445339CIL_0008A0_0002ENSMUSG00000031979ENSMUST00000034460ENSMUST00000108803ENSMUST00000129977ENSMUST00000176159ENSMUSG00000031980ENSMUST00000063278ENSMUSG00000031981ENSMUST00000093033ENSMUST00000133086ENSMUST00000133583ENSMUSG00000050751ENSMUST00000052580ENSMUST00000136892ENSMUST00000140012ENSMUST00000140126ENSMUST00000172566
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143641 ENST00000366672 19.597±0.00 13.255±0.00 2.059±0.00 5.733±3.72 10.392±5.40 9.461±7.87 4.591±3.13 12.501±3.84 27.984±23.78 8.726±8.08 14.499±9.43 26.455±10.80 31.016±3.44 14.879±4.16
ENST00000485438 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.420±0.00 N/A N/A N/A N/A
ENST00000488903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177614 ENST00000391860 N/A 0.134±0.00 0.049±0.00 5.252±1.82 0.155±0.00 0.075±0.01 0.299±0.21 0.216±0.00 0.427±0.41 0.119±0.00 0.071±0.03 0.162±0.01 0.314±0.03 0.828±0.20
ENST00000525115 N/A N/A 0.605±0.00 N/A 0.344±0.00 0.134±0.08 1.220±1.02 0.638±0.00 1.807±0.00 0.418±0.00 0.277±0.00 0.590±0.35 0.640±0.15 1.808±0.00
ENST00000530424 N/A N/A N/A N/A N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000224407 ENST00000414640 21.079±0.00 17.713±0.00 N/A 6.220±3.72 10.561±5.79 21.257±0.00 7.356±0.00 18.034±0.00 50.542±0.00 17.989±0.00 19.188±0.00 36.656±0.00 27.337±1.54 24.309±0.00
ENSG00000227006 ENST00000440729 0.124±0.00 N/A 0.591±0.00 0.261±0.00 0.298±0.28 0.105±0.02 0.066±0.05 0.347±0.00 0.013±0.00 0.180±0.00 0.131±0.00 0.114±0.01 0.051±0.00 1.270±0.00
ENSG00000227043 ENST00000435973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.586±1.36
ENSG00000228058 ENST00000445339 N/A 0.030±0.00 N/A 0.836±0.07 0.081±0.00 N/A 0.134±0.00 0.457±0.00 0.341±0.00 N/A N/A 0.078±0.01 0.102±0.00 0.191±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031979 ENSMUST00000034460 12.135±0.86 8.158±1.43 10.736±0.89 9.756±2.40 6.189±2.03 15.772±1.82 3.478±0.74 10.219±0.82 6.775±1.81 6.854±1.07 3.672±0.65 11.957±2.92 11.421±1.80 7.278±0.79
ENSMUST00000108803 N/A 1.432±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129977 2.652±0.00 1.386±0.00 N/A N/A N/A 4.267±0.00 0.949±0.00 N/A N/A N/A N/A 2.823±0.00 N/A N/A
ENSMUST00000176159 N/A N/A N/A 40.778±0.00 N/A N/A N/A N/A N/A N/A N/A 54.479±0.00 30.866±1.14 16.705±0.00
ENSMUST00000176279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031980 ENSMUST00000063278 46.499±34.59 8.119±0.97 0.671±0.13 5.352±5.33 10.118±3.16 20.471±2.11 3.196±0.35 38.757±7.55 389.370±269.51 1.977±0.62 3.869±0.87 72.047±18.06 9.960±8.42 64.386±35.51
ENSMUSG00000031981 ENSMUST00000093033 0.119±0.04 0.099±0.07 0.014±0.01 0.017±0.00 0.050±0.01 14.917±3.54 0.032±0.01 0.023±0.01 0.009±0.00 0.100±0.03 0.023±0.00 0.116±0.06 0.040±0.02 0.240±0.13
ENSMUST00000133086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.129±0.00 N/A N/A
ENSMUST00000133583 N/A N/A N/A 0.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.453±0.04 N/A
ENSMUSG00000050751 ENSMUST00000052580 N/A 1.139±0.29 1.303±0.10 8.644±9.02 0.044±0.01 0.904±0.57 N/A 0.176±0.02 0.081±0.01 0.132±0.03 0.063±0.04 6.391±2.65 0.051±0.04 3.098±1.96
ENSMUST00000128312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136892 0.081±0.02 N/A N/A N/A 0.039±0.01 0.610±0.08 0.155±0.02 0.036±0.00 N/A 0.137±0.02 0.061±0.00 N/A N/A 2.567±0.00
ENSMUST00000140012 2.195±1.48 2.991±0.65 2.420±0.05 5.304±1.34 0.030±0.00 0.933±0.15 0.080±0.03 0.123±0.03 0.056±0.02 0.079±0.02 0.138±0.01 10.546±3.66 0.222±0.02 2.512±0.51
ENSMUST00000140126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A
ENSMUST00000172566 N/A N/A N/A N/A N/A 1.206±0.00 N/A N/A N/A N/A N/A N/A 0.065±0.05 N/A

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