C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008BI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs253 VISTA 9606 3:114414337-115016568
GeneTranscriptPositionBiotype
ENSG00000240002 (YBX1P3)
Y box binding protein 1 pseudogene 3 		ENST00000468366 (YBX1P3-001) 114930541-114931449 processed_pseudogene
ENSG00000242290 (RP11-197K3.1)
 ENST00000465249 (RP11-197K3.1-001) 114453593-114520132 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008BI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs253 VISTA 10090 16:42976774-43578937
GeneTranscriptPositionBiotype
ENSMUSG00000082570 (Gm15711)
predicted gene 15711 		ENSMUST00000118889 (Gm15711-001) 43312594-43313128 processed_pseudogene
ENSMUSG00000083827 (Gm15712)
predicted gene 15712 		ENSMUST00000120369 (Gm15712-001) 43184573-43185728 processed_pseudogene
ENSMUSG00000085499 (Gm15713)
predicted gene 15713 		ENSMUST00000155900 (Gm15713-001) 43410518-43420196 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008BI_0001ENSG00000240002ENST00000468366ENSG00000242290ENST00000465249CIL_0008BI_0002ENSMUSG00000082570ENSMUST00000118889ENSMUSG00000083827ENSMUST00000120369ENSMUSG00000085499ENSMUST00000155900
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008BI_0001ENSG00000240002ENST00000468366ENSG00000242290ENST00000465249CIL_0008BI_0002ENSMUSG00000082570ENSMUST00000118889ENSMUSG00000083827ENSMUST00000120369ENSMUSG00000085499ENSMUST00000155900
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000240002 ENST00000468366 N/A 0.090±0.00 0.426±0.00 0.039±0.00 0.137±0.08 N/A 0.106±0.00 N/A 0.708±0.00 0.662±0.00 N/A 0.043±0.00 N/A N/A
ENSG00000242290 ENST00000465249 N/A 0.016±0.00 N/A 0.046±0.00 0.059±0.00 N/A 0.045±0.00 0.344±0.00 N/A N/A N/A N/A N/A 0.098±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000082570 ENSMUST00000118889 0.419±0.27 0.550±0.24 0.168±0.11 0.272±0.01 0.331±0.08 0.336±0.13 0.498±0.08 0.704±0.10 0.298±0.27 0.747±0.26 N/A 0.861±0.52 0.071±0.02 0.264±0.00
ENSMUSG00000083827 ENSMUST00000120369 0.069±0.03 N/A 0.290±0.10 0.093±0.01 0.172±0.04 0.101±0.00 0.061±0.00 0.058±0.02 0.046±0.04 0.131±0.05 N/A 0.466±0.32 0.034±0.02 0.039±0.02
ENSMUSG00000085499 ENSMUST00000155900 0.072±0.05 0.064±0.01 N/A 0.012±0.00 N/A N/A 0.065±0.03 0.112±0.07 0.046±0.05 0.073±0.03 0.015±0.00 0.107±0.08 0.047±0.00 0.021±0.00

Loading