C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008BL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs254 VISTA 9606 3:114555898-115157164
GeneTranscriptPositionBiotype
ENSG00000181722 (ZBTB20)
zinc finger and BTB domain containing 20 		ENST00000357258 (ZBTB20-005) 114338670-115147271 protein_coding
ENST00000393785 (ZBTB20-201) 114338107-114624945 protein_coding
ENST00000462705 (ZBTB20-006) 114338094-115071375 protein_coding
ENST00000463497 (ZBTB20-009) 114658341-114713997 processed_transcript
ENST00000463890 (ZBTB20-013) 114380882-115100295 processed_transcript
ENST00000464560 (ZBTB20-002) 114338684-114758940 protein_coding
ENST00000468769 (ZBTB20-011) 114791685-114801177 processed_transcript
ENST00000470186 (ZBTB20-012) 114974392-115144909 processed_transcript
ENST00000470311 (ZBTB20-019) 114351686-114454683 protein_coding
ENST00000470556 (ZBTB20-007) 114419054-114599303 processed_transcript
ENST00000471418 (ZBTB20-004) 114338652-114759271 protein_coding
ENST00000474710 (ZBTB20-003) 114338653-114383641 protein_coding
ENST00000479879 (ZBTB20-017) 114339304-114900342 processed_transcript
ENST00000480832 (ZBTB20-014) 114388066-114861793 processed_transcript
ENST00000481632 (ZBTB20-001) 114338652-114624206 protein_coding
ENST00000482689 (ZBTB20-018) 114380358-114454817 protein_coding
ENST00000486152 (ZBTB20-016) 114387275-114500391 processed_transcript
ENST00000488663 (ZBTB20-010) 114687226-115147265 processed_transcript
ENST00000491500 (ZBTB20-015) 114388066-114900622 processed_transcript
ENST00000492665 (ZBTB20-008) 114389046-115100292 processed_transcript
ENSG00000240002 (YBX1P3)
Y box binding protein 1 pseudogene 3 		ENST00000468366 (YBX1P3-001) 114930541-114931449 processed_pseudogene
ENSG00000242767 (ZBTB20-AS4)
ZBTB20 antisense RNA 4 		ENST00000472323 (ZBTB20-AS4-001) 115100423-115103061 lincRNA
ENSG00000279380 (AC069063.2)
HCG2022850 {ECO:0000313|EMBL:EAW79597.1}; PRO2591 {ECO:0000313|EMBL:AAF69640.1} 		ENST00000623916 (AC069063.2-201) 115120172-115121489 protein_coding

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0008BL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs254 VISTA 10090 16:42821972-43423556
GeneTranscriptPositionBiotype
ENSMUSG00000075070 (4932412D23Rik)
RIKEN cDNA 4932412D23 gene 		ENSMUST00000099759 (4932412D23Rik-001) 42796388-42875762 processed_transcript
ENSMUST00000130331 (4932412D23Rik-002) 42796901-42875746 processed_transcript
ENSMUST00000142270 (4932412D23Rik-003) 42725702-42875587 processed_transcript
ENSMUST00000147181 (4932412D23Rik-004) 42796749-42875740 processed_transcript
ENSMUSG00000081824 (BC002163)
cDNA sequence BC002163 		ENSMUST00000121906 (BC002163-001) 42955631-42955949 processed_pseudogene
ENSMUSG00000082570 (Gm15711)
predicted gene 15711 		ENSMUST00000118889 (Gm15711-001) 43312594-43313128 processed_pseudogene
ENSMUSG00000083827 (Gm15712)
predicted gene 15712 		ENSMUST00000120369 (Gm15712-001) 43184573-43185728 processed_pseudogene
ENSMUSG00000085499 (Gm15713)
predicted gene 15713 		ENSMUST00000155900 (Gm15713-001) 43410518-43420196 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008BL_0001ENSG00000181722ENST00000357258ENST00000393785ENST00000462705ENST00000463497ENST00000463890ENST00000464560ENST00000468769ENST00000470186ENST00000470311ENST00000470556ENST00000471418ENST00000474710ENST00000479879ENST00000480832ENST00000481632ENST00000482689ENST00000486152ENST00000488663ENST00000491500ENST00000492665ENSG00000240002ENST00000468366ENSG00000242767ENST00000472323ENSG00000279380ENST00000623916CIL_0008BL_0002ENSMUSG00000075070ENSMUST00000099759ENSMUST00000130331ENSMUST00000142270ENSMUST00000147181ENSMUSG00000081824ENSMUST00000121906ENSMUSG00000082570ENSMUST00000118889ENSMUSG00000083827ENSMUST00000120369ENSMUSG00000085499ENSMUST00000155900
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008BL_0001ENSG00000181722ENST00000357258ENST00000393785ENST00000462705ENST00000463497ENST00000463890ENST00000464560ENST00000471418ENST00000474710ENST00000481632ENST00000488663ENSG00000240002ENST00000468366ENSG00000242767ENST00000472323ENSG00000279380ENST00000623916CIL_0008BL_0002ENSMUSG00000075070ENSMUST00000099759ENSMUST00000142270ENSMUST00000147181ENSMUSG00000081824ENSMUST00000121906ENSMUSG00000082570ENSMUST00000118889ENSMUSG00000083827ENSMUST00000120369ENSMUSG00000085499ENSMUST00000155900
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000181722 ENST00000357258 0.392±0.00 N/A N/A 1.311±0.00 0.715±0.00 0.541±0.00 N/A N/A 0.158±0.00 N/A N/A N/A N/A N/A
ENST00000393785 N/A N/A N/A N/A N/A N/A N/A 0.340±0.00 N/A N/A N/A 0.451±0.35 N/A N/A
ENST00000462705 N/A N/A N/A N/A 0.158±0.00 2.339±0.00 N/A N/A N/A 7.469±0.00 N/A N/A 0.083±0.00 N/A
ENST00000463497 N/A N/A N/A N/A N/A N/A N/A 0.826±0.00 N/A N/A N/A N/A N/A N/A
ENST00000463890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A
ENST00000464560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A
ENST00000468769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471418 N/A N/A 6.845±0.00 N/A N/A 2.508±0.00 N/A 6.744±0.00 N/A N/A 3.418±0.00 N/A N/A N/A
ENST00000474710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.320±0.00 N/A N/A 5.989±0.96
ENST00000479879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481632 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.422±0.00 N/A N/A 0.224±0.17 7.313±0.00
ENST00000482689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488663 N/A N/A N/A N/A 0.196±0.00 N/A N/A 0.311±0.00 N/A N/A N/A 0.173±0.00 0.134±0.00 N/A
ENST00000491500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240002 ENST00000468366 N/A 0.090±0.00 0.426±0.00 0.039±0.00 0.137±0.08 N/A 0.106±0.00 N/A 0.708±0.00 0.662±0.00 N/A 0.043±0.00 N/A N/A
ENSG00000242767 ENST00000472323 0.199±0.00 0.821±0.00 0.191±0.00 0.138±0.10 0.249±0.04 0.314±0.00 0.227±0.07 0.297±0.00 0.093±0.02 0.649±0.47 0.281±0.00 0.204±0.00 N/A 0.480±0.00
ENSG00000279380 ENST00000623916 0.020±0.00 0.220±0.00 0.157±0.00 0.059±0.05 0.373±0.27 0.643±0.60 0.061±0.00 0.100±0.00 0.280±0.21 0.026±0.00 0.019±0.00 0.067±0.04 N/A 0.048±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000075070 ENSMUST00000099759 N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142270 N/A N/A 0.002±0.00 0.015±0.01 0.020±0.00 N/A N/A 0.039±0.02 0.002±0.00 N/A N/A N/A 0.008±0.00 0.333±0.00
ENSMUST00000147181 N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A N/A 4.711±0.00
ENSMUSG00000081824 ENSMUST00000121906 7.168±4.30 0.884±0.55 3.361±0.23 17.361±21.81 6.096±2.49 5.691±1.06 25.615±23.40 26.597±7.16 5.697±3.16 3.035±2.55 0.616±0.21 2.814±1.37 0.295±0.19 12.208±15.89
ENSMUSG00000082570 ENSMUST00000118889 0.419±0.27 0.550±0.24 0.168±0.11 0.272±0.01 0.331±0.08 0.336±0.13 0.498±0.08 0.704±0.10 0.298±0.27 0.747±0.26 N/A 0.861±0.52 0.071±0.02 0.264±0.00
ENSMUSG00000083827 ENSMUST00000120369 0.069±0.03 N/A 0.290±0.10 0.093±0.01 0.172±0.04 0.101±0.00 0.061±0.00 0.058±0.02 0.046±0.04 0.131±0.05 N/A 0.466±0.32 0.034±0.02 0.039±0.02
ENSMUSG00000085499 ENSMUST00000155900 0.072±0.05 0.064±0.01 N/A 0.012±0.00 N/A N/A 0.065±0.03 0.112±0.07 0.046±0.05 0.073±0.03 0.015±0.00 0.107±0.08 0.047±0.00 0.021±0.00

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