C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008CJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1811 VISTA 9606 21:37555304-38156921
GeneTranscriptPositionBiotype
ENSG00000157542 (KCNJ6)
potassium inwardly-rectifying channel, subfamily J, member 6 		ENST00000609713 (KCNJ6-001) 37607376-37916446 protein_coding
ENSG00000184029 (DSCR4)
Down syndrome critical region gene 4 		ENST00000328264 (DSCR4-001) 38054011-38121360 protein_coding
ENST00000398948 (DSCR4-002) 37951425-38121339 protein_coding
ENST00000482032 (DSCR4-003) 38093244-38121331 nonsense_mediated_decay
ENSG00000223608 (DSCR4-IT1)
DSCR4 intronic transcript 1 (non-protein coding) 		ENST00000417138 (DSCR4-IT1-001) 38006544-38010618 sense_intronic
ENSG00000233213 (KCNJ6-AS1)
KCNJ6 antisense RNA 1 		ENST00000435001 (KCNJ6-AS1-001) 37717102-37719569 sense_intronic
CIL_0008CJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1811 VISTA 10090 16:94656955-95258478
GeneTranscriptPositionBiotype
ENSMUSG00000022897 (Dyrk1a)
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a 		ENSMUST00000023614 (Dyrk1a-201) 94570907-94695517 protein_coding
ENSMUST00000119878 (Dyrk1a-001) 94570010-94695067 protein_coding
ENSMUST00000122284 (Dyrk1a-002) 94570479-94692201 protein_coding
ENSMUST00000134383 (Dyrk1a-005) 94668896-94679521 retained_intron
ENSMUST00000139250 (Dyrk1a-003) 94570864-94665947 protein_coding
ENSMUST00000155791 (Dyrk1a-004) 94570907-94668831 protein_coding
ENSMUSG00000043301 (Kcnj6)
potassium inwardly-rectifying channel, subfamily J, member 6 		ENSMUST00000095873 (Kcnj6-201) 94749266-94997696 protein_coding
ENSMUST00000099508 (Kcnj6-202) 94761080-94997696 protein_coding
ENSMUST00000165538 (Kcnj6-203) 94822532-94856690 protein_coding
ENSMUSG00000062609 (Kcnj15)
potassium inwardly-rectifying channel, subfamily J, member 15 		ENSMUST00000037154 (Kcnj15-004) 95257558-95300211 protein_coding
ENSMUST00000113854 (Kcnj15-005) 95257558-95299623 protein_coding
ENSMUST00000113855 (Kcnj15-006) 95257558-95300211 protein_coding
ENSMUST00000113856 (Kcnj15-201) 95257651-95300260 protein_coding
ENSMUST00000113858 (Kcnj15-003) 95258252-95300211 protein_coding
ENSMUST00000113859 (Kcnj15-007) 95258036-95300211 protein_coding
ENSMUST00000113861 (Kcnj15-002) 95257558-95298507 protein_coding
ENSMUST00000113862 (Kcnj15-001) 95257558-95300211 protein_coding
ENSMUST00000125847 (Kcnj15-009) 95257659-95295704 protein_coding
ENSMUST00000134166 (Kcnj15-008) 95257659-95296039 protein_coding
ENSMUST00000138329 (Kcnj15-012) 95279193-95291897 protein_coding
ENSMUST00000140222 (Kcnj15-010) 95257683-95295681 protein_coding
ENSMUST00000152516 (Kcnj15-011) 95258191-95291834 processed_transcript
ENSMUSG00000097551 (Gm7976)
predicted gene 7976 		ENSMUST00000181507 (Gm7976-201) 95016370-95067017 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CJ_0001ENSG00000157542ENST00000609713ENSG00000184029ENST00000328264ENST00000398948ENST00000482032ENSG00000223608ENST00000417138ENSG00000233213ENST00000435001CIL_0008CJ_0002ENSMUSG00000022897ENSMUST00000023614ENSMUST00000119878ENSMUST00000122284ENSMUST00000134383ENSMUST00000139250ENSMUST00000155791ENSMUSG00000043301ENSMUST00000095873ENSMUST00000099508ENSMUST00000165538ENSMUSG00000062609ENSMUST00000037154ENSMUST00000113854ENSMUST00000113855ENSMUST00000113856ENSMUST00000113858ENSMUST00000113859ENSMUST00000113861ENSMUST00000113862ENSMUST00000125847ENSMUST00000134166ENSMUST00000138329ENSMUST00000140222ENSMUST00000152516ENSMUSG00000097551ENSMUST00000181507
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CJ_0001ENSG00000157542ENST00000609713ENSG00000184029ENST00000328264ENST00000398948ENSG00000223608ENST00000417138ENSG00000233213ENST00000435001CIL_0008CJ_0002ENSMUSG00000022897ENSMUST00000023614ENSMUST00000119878ENSMUST00000122284ENSMUST00000155791ENSMUSG00000043301ENSMUST00000095873ENSMUST00000099508ENSMUST00000165538ENSMUSG00000062609ENSMUST00000037154ENSMUST00000113854ENSMUST00000113855ENSMUST00000113856ENSMUST00000113858ENSMUST00000113859ENSMUST00000113861ENSMUST00000113862ENSMUST00000125847ENSMUST00000134166ENSMUSG00000097551ENSMUST00000181507
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157542 ENST00000609713 0.026±0.00 0.077±0.00 N/A 1.330±0.10 0.048±0.01 0.062±0.04 0.019±0.01 0.031±0.01 0.014±0.00 0.039±0.01 0.017±0.02 0.008±0.01 0.015±0.01 0.083±0.02
ENSG00000184029 ENST00000328264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.300±0.15 0.147±0.00
ENST00000398948 0.153±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.205±0.00
ENST00000482032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223608 ENST00000417138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.433±0.00 0.332±0.25
ENSG00000233213 ENST00000435001 N/A 0.248±0.00 N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A 0.125±0.00 N/A 0.075±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022897 ENSMUST00000023614 N/A 3.125±0.26 N/A N/A 4.915±1.19 4.145±0.00 N/A N/A 1.116±0.23 3.661±0.00 N/A 4.479±2.09 N/A N/A
ENSMUST00000119878 6.800±2.14 2.162±0.24 3.795±0.48 11.637±0.35 5.235±1.27 5.238±1.72 6.729±0.32 4.923±0.67 3.771±2.23 7.683±0.97 4.438±0.66 6.817±2.31 8.900±2.04 2.921±0.89
ENSMUST00000122284 8.269±0.89 11.996±1.53 N/A 8.757±1.11 14.205±1.62 11.330±2.12 6.216±0.33 7.096±1.93 4.272±1.27 11.095±2.78 N/A 14.054±4.81 11.193±1.78 3.886±0.97
ENSMUST00000134383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.915±0.00
ENSMUSG00000043301 ENSMUST00000095873 N/A 0.060±0.02 N/A N/A N/A 0.049±0.01 N/A 0.018±0.00 N/A N/A 0.027±0.00 N/A N/A N/A
ENSMUST00000099508 N/A N/A N/A 1.368±0.00 N/A N/A 0.009±0.00 N/A 0.002±0.00 0.016±0.00 0.026±0.00 N/A 0.003±0.00 N/A
ENSMUST00000165538 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A 0.015±0.00 N/A N/A N/A
ENSMUSG00000062609 ENSMUST00000037154 0.107±0.00 N/A N/A N/A 0.389±0.00 0.035±0.01 0.074±0.00 23.819±3.23 N/A 5.281±1.45 N/A N/A 0.311±0.00 0.024±0.00
ENSMUST00000113854 0.620±0.39 0.165±0.03 0.476±0.00 0.031±0.01 0.203±0.11 0.071±0.04 0.194±0.08 37.130±7.45 0.032±0.01 8.262±1.64 0.056±0.02 0.251±0.10 0.235±0.18 0.128±0.07
ENSMUST00000113855 N/A N/A N/A N/A 0.097±0.00 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113856 N/A N/A N/A N/A 0.079±0.00 N/A N/A 17.293±1.33 0.078±0.00 N/A N/A N/A 0.316±0.05 N/A
ENSMUST00000113858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00
ENSMUST00000113859 0.333±0.16 0.275±0.02 1.151±0.31 N/A 0.117±0.03 N/A 0.239±0.09 34.776±3.93 0.066±0.02 3.739±0.60 0.041±0.00 0.187±0.09 0.339±0.37 0.016±0.01
ENSMUST00000113861 0.139±0.00 N/A N/A 0.012±0.00 N/A 0.027±0.00 N/A N/A 0.026±0.00 N/A 0.020±0.01 N/A 0.020±0.00 0.064±0.00
ENSMUST00000113862 N/A 0.026±0.00 N/A 0.007±0.00 N/A 0.061±0.00 N/A N/A 0.025±0.00 N/A N/A 0.118±0.02 N/A 0.056±0.00
ENSMUST00000125847 N/A N/A N/A N/A N/A 0.387±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134166 N/A 0.397±0.12 N/A N/A 0.555±0.17 0.050±0.00 N/A N/A N/A N/A 0.179±0.00 0.775±0.00 N/A N/A
ENSMUST00000138329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097551 ENSMUST00000181507 0.142±0.06 0.133±0.01 1.410±0.81 4.226±2.14 0.317±0.09 0.104±0.01 0.207±0.11 0.163±0.06 0.328±0.16 0.376±0.21 0.052±0.04 1.198±0.87 1.095±0.11 4.815±2.44

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