C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008D6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1709 VISTA 9606 8:129331844-129935071
GeneTranscriptPositionBiotype
ENSG00000147697 (GSDMC)
gasdermin C 		ENST00000276708 (GSDMC-001) 129748196-129786888 protein_coding
ENST00000521365 (GSDMC-003) 129751708-129752757 retained_intron
ENST00000522273 (GSDMC-002) 129748196-129752886 retained_intron
ENST00000619643 (GSDMC-201) 129748197-129777587 protein_coding
ENSG00000153310 (FAM49B)
family with sequence similarity 49, member B 		ENST00000401979 (FAM49B-005) 129841470-130016451 protein_coding
ENST00000517654 (FAM49B-009) 129841484-130016451 protein_coding
ENST00000517672 (FAM49B-026) 129871381-129970972 protein_coding
ENST00000517801 (FAM49B-027) 129850554-129862326 retained_intron
ENST00000518167 (FAM49B-015) 129871375-130016463 protein_coding
ENST00000518283 (FAM49B-016) 129862234-130016637 protein_coding
ENST00000518285 (FAM49B-014) 129970676-130016556 processed_transcript
ENST00000518344 (FAM49B-021) 129902961-129939771 retained_intron
ENST00000518879 (FAM49B-012) 129855611-130016665 processed_transcript
ENST00000519020 (FAM49B-024) 129862326-130016558 protein_coding
ENST00000519070 (FAM49B-022) 129871427-129939806 protein_coding
ENST00000519110 (FAM49B-008) 129841470-130016672 protein_coding
ENST00000519142 (FAM49B-018) 129855583-129970990 protein_coding
ENST00000519540 (FAM49B-004) 129841497-129939872 protein_coding
ENST00000519824 (FAM49B-001) 129839593-129939832 protein_coding
ENST00000520204 (FAM49B-025) 129862229-129939763 protein_coding
ENST00000520254 (FAM49B-023) 129862294-129939818 protein_coding
ENST00000520887 (FAM49B-028) 129842080-129847317 retained_intron
ENST00000521223 (FAM49B-020) 129855698-130016453 processed_transcript
ENST00000522250 (FAM49B-010) 129841484-129939694 protein_coding
ENST00000522361 (FAM49B-017) 129871433-130016451 protein_coding
ENST00000522702 (FAM49B-019) 129855688-130016637 processed_transcript
ENST00000522746 (FAM49B-002) 129841470-129939754 protein_coding
ENST00000522941 (FAM49B-003) 129841503-129939746 protein_coding
ENST00000523288 (FAM49B-007) 129841470-130016697 retained_intron
ENST00000523509 (FAM49B-006) 129841470-130016405 protein_coding
ENST00000523514 (FAM49B-013) 129970509-130016652 retained_intron
ENST00000523993 (FAM49B-011) 129862250-130017129 protein_coding
ENST00000615041 (FAM49B-201) 129846825-129871436 protein_coding
ENSG00000200075 (SNORA25)
Small nucleolar RNA SNORA25 		ENST00000363205 (SNORA25.1-203) 129868590-129868716 snoRNA
ENSG00000224110 (MTRF1LP2)
mitochondrial translational release factor 1-like pseudogene 2 		ENST00000506027 (MTRF1LP2-001) 129728744-129730445 processed_pseudogene
ENSG00000243402 (RP11-473O4.1)
 ENST00000490340 (RP11-473O4.1-001) 129864478-129865052 processed_pseudogene
ENSG00000254223 (RP11-419K12.1)
 ENST00000522667 (RP11-419K12.1-001) 129679135-129683679 lincRNA
ENSG00000254263 (RP11-473O4.4)
 ENST00000521014 (RP11-473O4.4-001) 129890465-129901758 lincRNA
ENSG00000264680 (AC016178.1)
 ENST00000582899 (AC016178.1-201) 129497348-129497428 miRNA
ENSG00000265687 (AC016178.2)
 ENST00000580804 (AC016178.2-201) 129496970-129497050 miRNA
ENSG00000266387 (AC016178.3)
 ENST00000582296 (AC016178.3-201) 129497587-129497667 miRNA
CIL_0008D6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1709 VISTA 10090 15:63374092-63976818
GeneTranscriptPositionBiotype
ENSMUSG00000022378 (Fam49b)
family with sequence similarity 49, member B 		ENSMUST00000063838 (Fam49b-201) 63929097-64060448 protein_coding
ENSMUST00000164532 (Fam49b-202) 63930944-63997969 protein_coding
ENSMUSG00000055748 (Gsdmc4)
gasdermin C4 		ENSMUST00000063530 (Gsdmc4-201) 63891265-63902936 protein_coding
ENSMUST00000188108 (Gsdmc4-001) 63891264-63912297 protein_coding
ENSMUSG00000055827 (Gsdmc3)
gasdermin C3 		ENSMUST00000089894 (Gsdmc3-201) 63858271-63869297 protein_coding
ENSMUST00000185526 (Gsdmc3-002) 63857724-63877720 protein_coding
ENSMUST00000190682 (Gsdmc3-001) 63857727-63878558 protein_coding
ENSMUSG00000056293 (Gsdmc2)
gasdermin C2 		ENSMUST00000089900 (Gsdmc2-201) 63824346-63835949 protein_coding
ENSMUST00000188404 (Gsdmc2-001) 63824346-63845177 protein_coding
ENSMUST00000188691 (Gsdmc2-002) 63824482-63845162 protein_coding
ENSMUSG00000062543 (Gsdmcl1)
gasdermin C-like 1 		ENSMUST00000071847 (Gsdmcl1-002) 63847309-63850942 processed_transcript
ENSMUST00000190937 (Gsdmcl1-001) 63848662-63855155 transcribed_unprocessed_pseudogene
ENSMUSG00000079025 (Gsdmc)
gasdermin C 		ENSMUST00000110125 (Gsdmc-001) 63775968-63808759 protein_coding
ENSMUST00000173503 (Gsdmc-002) 63778677-63804410 protein_coding
ENSMUSG00000095812 (Gm5473)
predicted pseudogene 5473 		ENSMUST00000179326 (Gm5473-201) 63631697-63632338 processed_pseudogene
ENSMUSG00000099435 (RP24-254D18.3)
RIKEN cDNA 1700065I16 gene 		ENSMUST00000185277 (RP24-254D18.3-001) 63818210-63821393 transcribed_unprocessed_pseudogene
ENSMUST00000185477 (RP24-254D18.3-002) 63817188-63819540 processed_transcript
ENSMUST00000191090 (RP24-254D18.3-003) 63817202-63819420 processed_transcript
ENSMUSG00000100127 (Gsdmcl-ps)
gasdermin C-like, pseudogene 		ENSMUST00000185574 (Gsdmcl-ps-002) 63914461-63925455 processed_transcript
ENSMUST00000188344 (Gsdmcl-ps-004) 63922277-63923197 retained_intron
ENSMUST00000188367 (Gsdmcl-ps-001) 63915780-63925666 unitary_pseudogene
ENSMUST00000191285 (Gsdmcl-ps-003) 63914448-63917063 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147697 ENST00000276708 0.029±0.00 0.035±0.00 N/A 0.088±0.00 0.112±0.01 0.023±0.00 N/A 0.020±0.00 0.007±0.00 0.085±0.04 N/A 0.411±0.35 0.026±0.00 0.062±0.00
ENST00000521365 N/A N/A N/A 0.187±0.00 0.272±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522273 N/A N/A N/A 0.075±0.04 0.089±0.00 N/A 0.945±0.19 N/A 0.003±0.00 N/A 2.607±2.36 N/A 0.043±0.01 N/A
ENST00000619643 N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A N/A 0.492±0.13 N/A N/A
ENSG00000153310 ENST00000401979 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.603±0.00 N/A N/A N/A N/A
ENST00000517654 5.553±0.00 3.957±0.00 N/A N/A 5.709±0.00 1.971±0.00 2.538±0.00 3.280±0.00 2.369±0.00 7.964±0.00 N/A 8.800±5.54 8.820±3.18 N/A
ENST00000517672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517801 N/A N/A N/A N/A N/A N/A 1.396±0.00 1.744±0.00 N/A N/A N/A 15.820±0.00 N/A N/A
ENST00000518167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519020 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.265±0.00 N/A N/A N/A N/A
ENST00000519070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519110 N/A N/A N/A N/A 2.563±0.00 N/A N/A N/A N/A N/A N/A 3.018±0.00 N/A N/A
ENST00000519142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519540 2.411±0.00 N/A N/A N/A 3.957±1.67 2.243±0.00 2.449±0.00 0.777±0.00 1.241±0.00 N/A 1.504±0.00 9.158±6.93 7.017±0.84 9.491±3.44
ENST00000519824 N/A 1.772±0.00 N/A 13.114±8.12 2.487±0.00 0.604±0.00 1.669±0.00 N/A 0.763±0.37 N/A 1.116±0.00 4.068±2.89 2.082±0.00 1.980±0.48
ENST00000520204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522250 2.094±0.00 9.095±0.00 N/A N/A 4.204±0.00 1.906±0.00 N/A 7.544±0.00 3.116±0.00 4.981±0.00 N/A 4.514±0.00 6.574±0.49 4.370±0.00
ENST00000522361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.348±0.00 4.805±0.00 6.460±0.00
ENST00000523288 N/A N/A 1.229±0.00 N/A N/A N/A N/A N/A N/A 2.098±0.71 N/A 2.415±0.00 N/A N/A
ENST00000523509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.015±0.00 N/A N/A N/A
ENST00000523514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615041 N/A N/A 1.711±0.00 N/A N/A 5.080±0.00 N/A 1.986±0.00 3.793±0.00 N/A N/A N/A N/A N/A
ENSG00000200075 ENST00000363205 N/A N/A N/A 0.867±0.00 0.283±0.00 N/A N/A N/A N/A 0.685±0.00 N/A N/A N/A N/A
ENSG00000224110 ENST00000506027 0.021±0.00 0.022±0.00 N/A N/A N/A N/A 0.040±0.00 0.098±0.00 0.020±0.00 0.144±0.00 N/A 0.011±0.00 N/A 0.058±0.00
ENSG00000243402 ENST00000490340 N/A 0.026±0.00 0.298±0.00 0.163±0.00 1.193±1.06 0.324±0.00 0.323±0.30 0.137±0.00 0.598±0.00 1.044±1.02 0.022±0.00 0.566±0.69 N/A 0.071±0.00
ENSG00000254223 ENST00000522667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00
ENSG00000254263 ENST00000521014 0.134±0.00 0.556±0.00 2.257±0.00 0.162±0.00 0.230±0.00 N/A 0.126±0.00 0.535±0.04 0.023±0.00 0.113±0.00 0.071±0.00 0.109±0.03 N/A 0.181±0.04
ENSG00000264680 ENST00000582899 N/A N/A N/A N/A N/A N/A N/A 1.062±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000265687 ENST00000580804 N/A N/A N/A 0.987±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266387 ENST00000582296 N/A 1.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022378 ENSMUST00000063838 1.365±0.16 1.826±0.42 1.910±0.00 13.197±4.20 1.742±0.36 1.955±0.60 0.632±0.00 1.064±0.48 0.649±0.43 1.644±0.35 7.348±0.31 3.256±2.53 N/A 1.266±0.16
ENSMUST00000164532 5.266±0.58 2.663±0.38 17.077±0.08 17.208±4.97 9.933±3.15 3.130±0.38 2.921±0.65 3.487±0.66 11.752±10.09 5.700±1.44 2.571±0.00 10.553±4.14 28.792±7.64 7.319±2.87
ENSMUSG00000055748 ENSMUST00000063530 0.018±0.00 0.073±0.01 N/A 0.011±0.00 0.033±0.01 N/A 0.042±0.01 0.082±0.06 0.038±0.04 0.290±0.24 0.023±0.00 0.148±0.11 0.026±0.01 0.546±0.41
ENSMUST00000188108 0.034±0.01 N/A 0.298±0.06 N/A N/A 209.522±23.12 N/A 0.051±0.03 0.285±0.00 0.619±0.14 N/A N/A 0.084±0.00 0.289±0.00
ENSMUSG00000055827 ENSMUST00000089894 N/A N/A N/A N/A 0.058±0.00 25.292±4.66 N/A 0.410±0.12 0.022±0.02 N/A N/A 0.117±0.06 N/A 0.105±0.09
ENSMUST00000185526 0.127±0.05 N/A 78.307±5.41 N/A N/A 17.741±4.26 N/A 0.348±0.17 N/A N/A N/A N/A N/A N/A
ENSMUST00000190682 N/A N/A N/A 0.007±0.00 N/A N/A N/A 0.774±0.13 N/A 0.114±0.02 N/A 0.028±0.00 N/A 0.083±0.05
ENSMUSG00000056293 ENSMUST00000089900 1.791±1.12 N/A 74.666±3.02 0.008±0.00 N/A 25.322±9.32 N/A 0.819±0.53 0.015±0.01 0.205±0.13 N/A 0.130±0.05 0.014±0.02 0.447±0.23
ENSMUST00000188404 N/A N/A 144.141±17.13 N/A N/A 22.667±3.72 N/A 0.681±0.33 N/A N/A N/A N/A N/A N/A
ENSMUST00000188691 0.511±0.00 N/A 37.692±14.57 N/A N/A 17.759±1.04 N/A 0.474±0.12 0.104±0.00 N/A N/A 0.125±0.04 N/A 0.061±0.00
ENSMUSG00000062543 ENSMUST00000071847 0.028±0.00 N/A N/A 0.007±0.00 N/A 0.070±0.02 N/A N/A N/A N/A N/A N/A N/A 2.839±0.14
ENSMUST00000190937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079025 ENSMUST00000110125 0.039±0.03 N/A 0.432±0.14 0.009±0.00 0.017±0.00 0.539±0.27 N/A 0.034±0.02 0.004±0.00 1.338±0.09 N/A 0.035±0.03 0.009±0.00 0.060±0.03
ENSMUST00000173503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A
ENSMUSG00000095812 ENSMUST00000179326 N/A N/A 0.004±0.00 0.024±0.01 N/A N/A N/A 0.065±0.00 0.021±0.00 N/A N/A N/A N/A 0.227±0.08
ENSMUSG00000099435 ENSMUST00000185277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.144±0.00
ENSMUST00000185477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.498±10.02
ENSMUST00000191090 N/A N/A N/A N/A N/A 0.167±0.01 N/A N/A N/A N/A N/A N/A 0.009±0.00 9.601±4.06
ENSMUSG00000100127 ENSMUST00000185574 0.038±0.00 N/A 0.186±0.00 0.007±0.00 0.051±0.01 0.514±0.00 0.015±0.00 0.029±0.02 0.007±0.00 0.015±0.00 N/A 0.042±0.01 N/A 15.695±1.76
ENSMUST00000188344 N/A N/A 0.442±0.00 0.532±0.00 N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A 0.222±0.00 N/A
ENSMUST00000188367 N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191285 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A

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