C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008EL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm557 VISTA 9606 18:47706836-48309090
GeneTranscriptPositionBiotype
ENSG00000175387 (SMAD2)
SMAD family member 2 		ENST00000262160 (SMAD2-001) 47808957-47930559 protein_coding
ENST00000356825 (SMAD2-201) 47833096-47931146 protein_coding
ENST00000402690 (SMAD2-002) 47831551-47931141 protein_coding
ENST00000585978 (SMAD2-009) 47870475-47923642 protein_coding
ENST00000586040 (SMAD2-004) 47841225-47896811 protein_coding
ENST00000586487 (SMAD2-010) 47869422-47895725 processed_transcript
ENST00000586514 (SMAD2-005) 47868327-47930837 protein_coding
ENST00000587269 (SMAD2-008) 47868326-47930599 protein_coding
ENST00000587353 (SMAD2-011) 47868263-47886923 processed_transcript
ENST00000587421 (SMAD2-007) 47869352-47930362 protein_coding
ENST00000589877 (SMAD2-006) 47870473-47930855 protein_coding
ENST00000591214 (SMAD2-003) 47844912-47930842 protein_coding
ENSG00000184828 (ZBTB7C)
zinc finger and BTB domain containing 7C 		ENST00000535628 (ZBTB7C-028) 48026673-48137361 protein_coding
ENST00000585404 (ZBTB7C-019) 48041033-48338391 protein_coding
ENST00000586047 (ZBTB7C-024) 48041052-48203601 protein_coding
ENST00000586438 (ZBTB7C-026) 48026673-48165566 protein_coding
ENST00000586525 (ZBTB7C-008) 48041033-48409292 protein_coding
ENST00000586743 (ZBTB7C-021) 48041033-48338391 protein_coding
ENST00000587107 (ZBTB7C-006) 48041033-48409292 protein_coding
ENST00000588028 (ZBTB7C-018) 48041063-48375564 protein_coding
ENST00000588053 (ZBTB7C-014) 48041052-48375586 protein_coding
ENST00000588149 (ZBTB7C-002) 48041052-48410752 protein_coding
ENST00000588566 (ZBTB7C-012) 48041063-48375564 protein_coding
ENST00000588970 (ZBTB7C-007) 48041033-48409292 protein_coding
ENST00000588982 (ZBTB7C-025) 48026673-48165566 protein_coding
ENST00000589077 (ZBTB7C-022) 48041033-48338391 protein_coding
ENST00000589170 (ZBTB7C-017) 48041063-48375564 protein_coding
ENST00000589194 (ZBTB7C-003) 48041033-48409292 protein_coding
ENST00000589619 (ZBTB7C-020) 48041033-48338391 protein_coding
ENST00000590178 (ZBTB7C-010) 48041052-48375625 protein_coding
ENST00000590374 (ZBTB7C-016) 48041063-48375564 protein_coding
ENST00000590437 (ZBTB7C-027) 48040908-48165331 protein_coding
ENST00000590800 (ZBTB7C-001) 48026673-48409422 protein_coding
ENST00000590855 (ZBTB7C-005) 48041033-48409292 protein_coding
ENST00000591279 (ZBTB7C-004) 48041033-48409292 protein_coding
ENST00000591405 (ZBTB7C-011) 48041052-48375608 protein_coding
ENST00000591526 (ZBTB7C-015) 48041063-48375564 protein_coding
ENST00000592387 (ZBTB7C-009) 48041033-48409292 protein_coding
ENST00000592656 (ZBTB7C-023) 48041033-48338391 protein_coding
ENST00000593159 (ZBTB7C-013) 48041063-48375564 protein_coding
ENSG00000206944 (RNU6-708P)
RNA, U6 small nuclear 708, pseudogene 		ENST00000384217 (RNU6-708P-201) 48169784-48169890 snRNA
ENSG00000267541 (RP11-380M21.2)
 ENST00000591258 (RP11-380M21.2-001) 47853233-47853457 processed_pseudogene
ENSG00000269365 (RP11-380M21.4)
 ENST00000599498 (RP11-380M21.4-001) 47878295-47882444 antisense
ENSG00000278891 (RP11-246E12.2)
 ENST00000623698 (RP11-246E12.2-001) 48147634-48150864 TEC
ENSG00000279366 (RP11-380M21.3)
 ENST00000625002 (RP11-380M21.3-001) 47912207-47912504 TEC
ENSG00000279707 (RP11-380M21.1)
 ENST00000624377 (RP11-380M21.1-001) 47866839-47867367 TEC
ENSG00000280197 (C18orf12)
chromosome 18 open reading frame 12 		ENST00000623329 (C18orf12-001) 48252301-48252837 TEC
CIL_0008EL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm557 VISTA 10090 18:75860386-76461964
GeneTranscriptPositionBiotype
ENSMUSG00000024563 (Smad2)
SMAD family member 2 		ENSMUST00000025453 (Smad2-002) 76261121-76305294 protein_coding
ENSMUST00000091831 (Smad2-003) 76241701-76304730 protein_coding
ENSMUST00000113930 (Smad2-004) 76262492-76302642 protein_coding
ENSMUST00000165084 (Smad2-007) 76262492-76299837 protein_coding
ENSMUST00000168423 (Smad2-001) 76241580-76305731 protein_coding
ENSMUST00000171256 (Smad2-005) 76242046-76298450 protein_coding
ENSMUST00000172198 (Smad2-006) 76242174-76299893 protein_coding
ENSMUSG00000044646 (Zbtb7c)
zinc finger and BTB domain containing 7C 		ENSMUST00000058997 (Zbtb7c-201) 75820178-76148561 protein_coding
ENSMUST00000167921 (Zbtb7c-202) 76059458-76146443 protein_coding
ENSMUSG00000098276 (Mir6358)
microRNA 6358 		ENSMUST00000184549 (Mir6358-201) 76170552-76170652 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008EL_0001ENSG00000175387ENST00000262160ENST00000356825ENST00000402690ENST00000586040ENST00000586514ENST00000591214ENSG00000184828ENST00000535628ENST00000586438ENST00000588149ENST00000590178ENST00000590800ENSG00000206944ENST00000384217ENSG00000267541ENST00000591258ENSG00000269365ENST00000599498ENSG00000278891ENST00000623698ENSG00000279366ENST00000625002ENSG00000279707ENST00000624377ENSG00000280197ENST00000623329CIL_0008EL_0002ENSMUSG00000024563ENSMUST00000025453ENSMUST00000091831ENSMUST00000113930ENSMUST00000168423ENSMUST00000171256ENSMUSG00000044646ENSMUST00000058997ENSMUST00000167921ENSMUSG00000098276ENSMUST00000184549
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175387 ENST00000262160 0.538±0.00 0.833±0.00 0.669±0.00 0.586±0.13 0.770±0.04 0.616±0.23 0.272±0.01 0.356±0.04 0.401±0.27 0.642±0.29 0.126±0.00 0.610±0.22 0.246±0.07 0.712±0.11
ENST00000356825 5.310±0.00 1.713±0.00 2.442±0.00 1.656±0.06 2.856±0.69 2.436±0.55 1.367±0.00 1.650±0.96 1.328±0.67 1.993±0.37 1.320±0.53 3.194±1.04 1.573±0.22 2.582±0.84
ENST00000402690 N/A N/A N/A N/A 0.996±0.00 1.576±0.00 0.820±0.00 0.468±0.00 1.301±0.00 2.846±0.00 N/A N/A N/A N/A
ENST00000585978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586040 19.784±0.00 8.224±0.00 N/A 7.175±1.37 10.963±5.00 13.581±7.82 6.061±0.96 5.672±3.45 5.851±3.27 9.697±0.00 7.426±4.90 9.347±4.79 10.039±1.60 15.862±6.37
ENST00000586487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586514 N/A N/A N/A 7.424±0.00 10.539±0.00 N/A 5.284±0.00 5.058±0.00 14.115±0.00 15.294±0.00 N/A N/A N/A N/A
ENST00000587269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591214 N/A N/A N/A N/A N/A N/A N/A 2.635±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000184828 ENST00000535628 N/A N/A 0.078±0.00 0.332±0.00 0.934±0.40 1.413±0.44 N/A 0.106±0.00 0.275±0.00 N/A 0.534±0.00 3.271±4.04 2.964±0.00 N/A
ENST00000585404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586438 N/A N/A N/A N/A N/A N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000586525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588149 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.939±0.00 N/A N/A N/A N/A
ENST00000588566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590178 N/A N/A N/A N/A N/A N/A N/A N/A 0.773±0.00 N/A N/A N/A N/A N/A
ENST00000590374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590800 1.010±0.00 0.892±0.00 N/A 0.948±0.00 1.058±0.00 0.932±0.09 N/A 0.897±0.00 N/A N/A N/A 2.508±1.93 1.187±0.52 4.383±0.00
ENST00000590855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206944 ENST00000384217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.387±0.00
ENSG00000267541 ENST00000591258 1.456±0.00 1.145±0.00 N/A 3.130±0.00 1.151±0.00 3.146±0.00 9.426±0.00 3.008±0.00 3.869±0.00 0.065±0.00 2.787±0.00 N/A N/A 1.330±0.00
ENSG00000269365 ENST00000599498 0.042±0.00 N/A N/A 0.238±0.00 N/A N/A N/A 0.038±0.00 0.270±0.00 N/A N/A N/A 0.135±0.00 0.216±0.00
ENSG00000278891 ENST00000623698 0.082±0.00 0.243±0.00 0.049±0.00 0.125±0.09 0.081±0.03 0.122±0.00 0.030±0.02 0.053±0.00 0.132±0.10 0.254±0.09 0.013±0.00 0.042±0.02 0.064±0.00 0.143±0.03
ENSG00000279366 ENST00000625002 N/A N/A N/A 0.077±0.00 0.753±0.61 0.382±0.00 1.128±0.00 6.117±0.00 0.519±0.00 N/A N/A 0.543±0.07 N/A N/A
ENSG00000279707 ENST00000624377 N/A N/A N/A 0.128±0.00 N/A 0.347±0.00 0.059±0.00 N/A N/A N/A N/A 0.307±0.25 0.730±0.00 0.360±0.17
ENSG00000280197 ENST00000623329 N/A N/A N/A N/A 1.295±0.00 0.974±0.00 N/A N/A 1.778±0.00 0.590±0.00 N/A N/A N/A 0.134±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024563 ENSMUST00000025453 3.668±1.27 8.007±1.26 N/A 2.376±0.08 5.395±2.47 4.961±1.24 2.050±0.20 3.223±1.43 2.737±0.94 2.782±1.32 N/A 6.271±1.90 6.911±0.50 2.185±0.18
ENSMUST00000091831 4.548±0.00 5.429±1.84 N/A 6.828±4.28 2.160±0.00 3.289±0.63 1.982±1.05 2.359±0.32 1.535±0.58 1.962±0.00 0.786±0.08 11.690±10.26 28.600±12.77 6.037±4.57
ENSMUST00000113930 N/A 7.610±0.00 N/A 6.452±1.58 N/A N/A N/A 2.812±0.75 1.598±0.00 5.772±2.15 N/A 6.173±0.00 9.068±0.00 N/A
ENSMUST00000165084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168423 3.188±0.71 N/A 11.107±5.03 6.747±4.10 4.024±1.81 1.055±0.07 1.492±0.37 1.466±0.38 2.888±1.38 2.279±0.23 1.703±0.56 4.317±3.11 10.246±4.69 1.000±0.39
ENSMUST00000171256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.073±0.00
ENSMUST00000172198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000044646 ENSMUST00000058997 1.224±0.23 1.110±0.29 0.827±0.12 1.366±0.77 0.936±0.43 1.600±0.00 0.367±0.15 0.840±0.18 0.192±0.16 0.511±0.09 0.129±0.07 1.135±0.58 1.323±0.79 0.221±0.09
ENSMUST00000167921 N/A 1.392±0.33 N/A 0.692±0.00 0.566±0.10 3.838±1.63 N/A N/A 0.115±0.04 0.727±0.12 0.218±0.00 3.501±0.94 2.166±1.13 0.452±0.00
ENSMUSG00000098276 ENSMUST00000184549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 181.648±0.00 N/A N/A

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