C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008IC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs12 VISTA 9606 16:78176711-78778047
GeneTranscriptPositionBiotype
ENSG00000260014 (LSM3P5)
LSM3 pseudogene 5
ENST00000566307 (LSM3P5-001) 78355529-78355834 processed_pseudogene
ENSG00000260733 (RP11-264L1.4)
ENST00000563408 (RP11-264L1.4-001) 78495926-78506568 antisense
ENSG00000260969 (RP11-190D6.2)
ENST00000567099 (RP11-190D6.2-001) 78237362-78241218 antisense
ENSG00000261837 (RP11-264L1.3)
ENST00000568764 (RP11-264L1.3-001) 78534374-78535648 sense_intronic
ENSG00000279129 (RP11-264L1.2)
ENST00000624947 (RP11-264L1.2-001) 78550739-78553296 TEC
ENST00000625162 (RP11-264L1.2-201) 78550739-78553290 TEC
ENSG00000279887 (RP11-264L1.1)
ENST00000623121 (RP11-264L1.1-001) 78525189-78526535 TEC
CIL_0008IC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs12 VISTA 10090 8:114444435-115045938
GeneTranscriptPositionBiotype
ENSMUSG00000089723 (Gm16117)
predicted gene 16117
ENSMUST00000160544 (Gm16117-001) 114639546-114642114 antisense
ENSMUSG00000089797 (Gm16118)
predicted gene 16118
ENSMUST00000161914 (Gm16118-001) 114698439-114708006 antisense
ENSMUSG00000090217 (Gm16116)
predicted gene 16116
ENSMUST00000159472 (Gm16116-001) 114591303-114594900 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008IC_0001ENSG00000260014ENST00000566307ENSG00000260733ENST00000563408ENSG00000260969ENST00000567099ENSG00000261837ENST00000568764ENSG00000279129ENST00000624947ENST00000625162ENSG00000279887ENST00000623121CIL_0008IC_0002ENSMUSG00000089723ENSMUST00000160544ENSMUSG00000089797ENSMUST00000161914ENSMUSG00000090217ENSMUST00000159472
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008IC_0001ENSG00000260014ENST00000566307ENSG00000260733ENST00000563408ENSG00000260969ENST00000567099ENSG00000261837ENST00000568764ENSG00000279129ENST00000624947ENST00000625162ENSG00000279887ENST00000623121CIL_0008IC_0002ENSMUSG00000089723ENSMUST00000160544ENSMUSG00000089797ENSMUST00000161914ENSMUSG00000090217ENSMUST00000159472
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000260014 ENST00000566307 N/A N/A 0.313±0.00 N/A 0.194±0.03 N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 0.452±0.00
ENSG00000260733 ENST00000563408 N/A 0.123±0.00 N/A N/A 0.103±0.00 N/A N/A 0.291±0.13 0.706±0.00 N/A N/A N/A N/A 0.047±0.00
ENSG00000260969 ENST00000567099 N/A N/A 0.189±0.00 N/A N/A N/A N/A 0.073±0.00 0.032±0.00 N/A N/A 1.823±0.00 N/A 1.908±0.00
ENSG00000261837 ENST00000568764 0.056±0.00 0.345±0.00 N/A 0.120±0.00 0.350±0.27 0.393±0.00 0.103±0.00 N/A N/A 0.791±0.00 N/A N/A N/A 0.083±0.00
ENSG00000279129 ENST00000624947 N/A N/A 0.469±0.00 N/A 0.276±0.01 0.326±0.00 0.061±0.00 0.182±0.00 0.210±0.00 0.122±0.00 0.025±0.00 0.064±0.04 0.064±0.00 0.102±0.00
ENST00000625162 0.081±0.00 0.282±0.00 0.470±0.00 0.176±0.00 0.265±0.00 0.326±0.00 0.066±0.00 0.158±0.02 0.125±0.08 0.098±0.02 0.051±0.00 0.085±0.05 0.065±0.00 0.135±0.01
ENSG00000279887 ENST00000623121 0.102±0.00 0.647±0.00 0.842±0.00 0.131±0.03 0.259±0.10 0.198±0.07 0.037±0.02 0.038±0.00 0.171±0.13 0.369±0.24 0.009±0.00 0.088±0.04 N/A 0.105±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000089723 ENSMUST00000160544 0.288±0.00 N/A 0.156±0.11 N/A N/A N/A N/A N/A N/A N/A 0.194±0.08 N/A N/A N/A
ENSMUSG00000089797 ENSMUST00000161914 0.634±0.18 0.278±0.11 0.751±0.12 0.094±0.00 1.730±1.09 0.393±0.15 0.057±0.00 0.292±0.15 0.083±0.03 1.099±0.30 3.858±0.88 1.327±0.54 0.067±0.03 0.232±0.15
ENSMUSG00000090217 ENSMUST00000159472 0.231±0.08 0.161±0.00 0.355±0.00 N/A 0.346±0.09 0.192±0.00 0.154±0.06 0.108±0.01 0.451±0.23 0.242±0.08 N/A 0.514±0.27 0.171±0.07 0.165±0.06

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