C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008LY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs184 VISTA 9606 15:96548408-97149771
GeneTranscriptPositionBiotype
ENSG00000185594 (SPATA8)
spermatogenesis associated 8 		ENST00000328504 (SPATA8-001) 96783389-96785615 protein_coding
ENST00000558553 (SPATA8-004) 96783474-96785178 protein_coding
ENST00000560327 (SPATA8-002) 96783487-96785608 retained_intron
ENST00000561002 (SPATA8-003) 96783449-96785075 retained_intron
ENSG00000214424 (FAM149B1P1)
family with sequence similarity 149, member B1 pseudogene 1 		ENST00000533428 (FAM149B1P1-001) 96756987-96758596 processed_pseudogene
ENSG00000215948 (AC055873.1)
 ENST00000401129 (AC055873.1-201) 97091262-97091352 miRNA
ENSG00000223120 (RN7SKP181)
RNA, 7SK small nuclear pseudogene 181 		ENST00000411188 (RN7SKP181-201) 96842069-96842384 misc_RNA
ENSG00000259282 (SPATA8-AS1)
SPATA8 antisense RNA 1 (head to head) 		ENST00000558722 (SPATA8-AS1-001) 96772007-96783312 antisense
ENST00000560888 (SPATA8-AS1-002) 96772005-96781654 antisense
ENSG00000259340 (CTD-2027G2.1)
 ENST00000559699 (CTD-2027G2.1-001) 96551381-96551517 processed_pseudogene
CIL_0008LY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs184 VISTA 10090 7:69544767-70146094
GeneTranscriptPositionBiotype
ENSMUSG00000098246 (Gm7627)
predicted gene 7627 		ENSMUST00000183205 (Gm7627-001) 69605842-69606840 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaTestisCIL_0008LY_0001ENSG00000185594ENST00000328504ENST00000558553ENST00000560327ENST00000561002ENSG00000214424ENST00000533428ENSG00000215948ENST00000401129ENSG00000223120ENST00000411188ENSG00000259282ENST00000558722ENST00000560888ENSG00000259340ENST00000559699CIL_0008LY_0002ENSMUSG00000098246ENSMUST00000183205
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaTestisCIL_0008LY_0001ENSG00000185594ENST00000328504ENST00000558553ENST00000560327ENSG00000214424ENST00000533428ENSG00000215948ENST00000401129ENSG00000223120ENST00000411188ENSG00000259282ENST00000558722ENSG00000259340ENST00000559699CIL_0008LY_0002ENSMUSG00000098246ENSMUST00000183205
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENSG00000185594 ENST00000328504 N/A N/A N/A N/A N/A N/A 0.051±0.00 0.064±0.00 0.057±0.00 101.168±33.38
ENST00000558553 0.198±0.00 0.367±0.00 N/A 0.685±0.00 N/A N/A N/A N/A N/A 33.110±0.00
ENST00000560327 N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A
ENST00000561002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214424 ENST00000533428 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 0.330±0.25
ENSG00000215948 ENST00000401129 N/A 0.218±0.00 0.423±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000223120 ENST00000411188 0.248±0.00 0.051±0.00 0.162±0.00 0.051±0.00 0.286±0.00 0.225±0.10 N/A N/A N/A 0.185±0.00
ENSG00000259282 ENST00000558722 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.163±0.00
ENST00000560888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259340 ENST00000559699 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.00
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENSMUSG00000098246 ENSMUST00000183205 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.434±0.72

Loading