C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008LY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs184 VISTA 9606 15:96548408-97149771
GeneTranscriptPositionBiotype
ENSG00000185594 (SPATA8)
spermatogenesis associated 8 		ENST00000328504 (SPATA8-001) 96783389-96785615 protein_coding
ENST00000558553 (SPATA8-004) 96783474-96785178 protein_coding
ENST00000560327 (SPATA8-002) 96783487-96785608 retained_intron
ENST00000561002 (SPATA8-003) 96783449-96785075 retained_intron
ENSG00000214424 (FAM149B1P1)
family with sequence similarity 149, member B1 pseudogene 1 		ENST00000533428 (FAM149B1P1-001) 96756987-96758596 processed_pseudogene
ENSG00000215948 (AC055873.1)
 ENST00000401129 (AC055873.1-201) 97091262-97091352 miRNA
ENSG00000223120 (RN7SKP181)
RNA, 7SK small nuclear pseudogene 181 		ENST00000411188 (RN7SKP181-201) 96842069-96842384 misc_RNA
ENSG00000259282 (SPATA8-AS1)
SPATA8 antisense RNA 1 (head to head) 		ENST00000558722 (SPATA8-AS1-001) 96772007-96783312 antisense
ENST00000560888 (SPATA8-AS1-002) 96772005-96781654 antisense
ENSG00000259340 (CTD-2027G2.1)
 ENST00000559699 (CTD-2027G2.1-001) 96551381-96551517 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008LY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs184 VISTA 10090 7:69544767-70146094
GeneTranscriptPositionBiotype
ENSMUSG00000098246 (Gm7627)
predicted gene 7627 		ENSMUST00000183205 (Gm7627-001) 69605842-69606840 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaTestisCIL_0008LY_0001ENSG00000185594ENST00000328504ENST00000558553ENST00000560327ENST00000561002ENSG00000214424ENST00000533428ENSG00000215948ENST00000401129ENSG00000223120ENST00000411188ENSG00000259282ENST00000558722ENST00000560888ENSG00000259340ENST00000559699CIL_0008LY_0002ENSMUSG00000098246ENSMUST00000183205
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaTestisCIL_0008LY_0001ENSG00000185594ENST00000328504ENST00000558553ENST00000560327ENSG00000214424ENST00000533428ENSG00000215948ENST00000401129ENSG00000223120ENST00000411188ENSG00000259282ENST00000558722ENSG00000259340ENST00000559699CIL_0008LY_0002ENSMUSG00000098246ENSMUST00000183205
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENSG00000185594 ENST00000328504 N/A N/A N/A N/A N/A N/A 0.051±0.00 0.064±0.00 0.057±0.00 101.168±33.38
ENST00000558553 0.198±0.00 0.367±0.00 N/A 0.685±0.00 N/A N/A N/A N/A N/A 33.110±0.00
ENST00000560327 N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A
ENST00000561002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214424 ENST00000533428 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 0.330±0.25
ENSG00000215948 ENST00000401129 N/A 0.218±0.00 0.423±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000223120 ENST00000411188 0.248±0.00 0.051±0.00 0.162±0.00 0.051±0.00 0.286±0.00 0.225±0.10 N/A N/A N/A 0.185±0.00
ENSG00000259282 ENST00000558722 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.163±0.00
ENST00000560888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259340 ENST00000559699 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.00
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENSMUSG00000098246 ENSMUST00000183205 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.434±0.72

Loading