C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008MZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1606 VISTA 9606 9:106119053-106722291
GeneTranscriptPositionBiotype
ENSG00000200131 (RN7SKP77)
RNA, 7SK small nuclear pseudogene 77
ENST00000363261 (RN7SKP77-201) 106679977-106680329 misc_RNA
ENSG00000229297 (RP11-540H22.2)
ENST00000430534 (RP11-540H22.2-001) 106584142-106591952 lincRNA
ENSG00000234229 (LINC01505)
long intergenic non-protein coding RNA 1505
ENST00000411451 (LINC01505-001) 106664754-106702662 lincRNA
ENST00000444985 (LINC01505-002) 106616058-106679798 lincRNA
ENSG00000234323 (RP11-308N19.1)
ENST00000425709 (RP11-308N19.1-001) 106450816-106604795 lincRNA
ENST00000435485 (RP11-308N19.1-002) 106278392-106604795 lincRNA
ENSG00000237062 (RP11-308N19.3)
ENST00000446206 (RP11-308N19.3-001) 106615078-106615806 lincRNA
CIL_0008MZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1606 VISTA 10090 4:54169466-54772653
GeneTranscriptPositionBiotype
ENSMUSG00000081428 (Tpt1-ps2)
tumor protein, translationally-controlled, pseudogene 2
ENSMUST00000120548 (Tpt1-ps2-001) 54564623-54565143 processed_pseudogene
ENSMUSG00000083624 (Gm12469)
predicted gene 12469
ENSMUST00000117623 (Gm12469-001) 54235670-54235876 processed_pseudogene
ENSMUSG00000083868 (Gm12477)
predicted gene 12477
ENSMUST00000121221 (Gm12477-001) 54669622-54670192 processed_pseudogene
ENSMUSG00000086371 (Gm12478)
predicted gene 12478
ENSMUST00000127709 (Gm12478-001) 54646542-54689451 lincRNA
ENSMUSG00000087077 (Gm12480)
predicted gene 12480
ENSMUST00000129576 (Gm12480-001) 54651903-54656077 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MZ_0001ENSG00000200131ENST00000363261ENSG00000229297ENST00000430534ENSG00000234229ENST00000411451ENST00000444985ENSG00000234323ENST00000425709ENST00000435485ENSG00000237062ENST00000446206CIL_0008MZ_0002ENSMUSG00000081428ENSMUST00000120548ENSMUSG00000083624ENSMUST00000117623ENSMUSG00000083868ENSMUST00000121221ENSMUSG00000086371ENSMUST00000127709ENSMUSG00000087077ENSMUST00000129576
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MZ_0001ENSG00000200131ENST00000363261ENSG00000229297ENST00000430534ENSG00000234229ENST00000411451ENST00000444985ENSG00000234323ENST00000425709ENST00000435485ENSG00000237062ENST00000446206CIL_0008MZ_0002ENSMUSG00000081428ENSMUST00000120548ENSMUSG00000083624ENSMUST00000117623ENSMUSG00000083868ENSMUST00000121221ENSMUSG00000086371ENSMUST00000127709ENSMUSG00000087077ENSMUST00000129576
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000200131 ENST00000363261 N/A N/A N/A N/A N/A N/A 0.741±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000229297 ENST00000430534 N/A N/A N/A N/A N/A N/A 0.079±0.05 N/A N/A N/A N/A N/A N/A N/A
ENSG00000234229 ENST00000411451 N/A 0.028±0.00 N/A 0.122±0.00 0.114±0.00 0.158±0.00 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000444985 N/A N/A N/A N/A N/A 0.010±0.00 0.037±0.00 N/A N/A N/A 0.326±0.00 N/A N/A 0.574±0.30
ENSG00000234323 ENST00000425709 N/A N/A N/A 0.097±0.00 N/A N/A 0.608±0.09 N/A N/A N/A N/A 0.036±0.00 0.015±0.00 0.014±0.00
ENST00000435485 0.036±0.00 0.047±0.00 N/A 0.088±0.00 0.039±0.00 0.152±0.00 0.212±0.07 0.040±0.00 0.030±0.02 0.045±0.00 N/A N/A 0.021±0.00 0.080±0.00
ENSG00000237062 ENST00000446206 N/A N/A N/A N/A N/A N/A 0.080±0.04 N/A N/A N/A N/A N/A N/A 0.305±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000081428 ENSMUST00000120548 N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A 0.149±0.00 N/A N/A N/A 0.112±0.00
ENSMUSG00000083624 ENSMUST00000117623 N/A N/A N/A N/A N/A N/A N/A N/A 0.576±0.40 N/A N/A 1.699±0.33 1.267±0.00 N/A
ENSMUSG00000083868 ENSMUST00000121221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00
ENSMUSG00000086371 ENSMUST00000127709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.596±0.20
ENSMUSG00000087077 ENSMUST00000129576 0.119±0.02 1.091±0.40 0.158±0.03 0.615±0.30 0.420±0.21 0.307±0.10 0.117±0.00 0.196±0.12 0.143±0.12 0.521±0.07 0.048±0.00 0.467±0.37 0.209±0.13 3.771±1.68

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