C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008OV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs802 VISTA 9606 18:47242733-47843421
GeneTranscriptPositionBiotype
ENSG00000175387 (SMAD2)
SMAD family member 2 		ENST00000262160 (SMAD2-001) 47808957-47930559 protein_coding
ENST00000356825 (SMAD2-201) 47833096-47931146 protein_coding
ENST00000402690 (SMAD2-002) 47831551-47931141 protein_coding
ENST00000585978 (SMAD2-009) 47870475-47923642 protein_coding
ENST00000586040 (SMAD2-004) 47841225-47896811 protein_coding
ENST00000586487 (SMAD2-010) 47869422-47895725 processed_transcript
ENST00000586514 (SMAD2-005) 47868327-47930837 protein_coding
ENST00000587269 (SMAD2-008) 47868326-47930599 protein_coding
ENST00000587353 (SMAD2-011) 47868263-47886923 processed_transcript
ENST00000587421 (SMAD2-007) 47869352-47930362 protein_coding
ENST00000589877 (SMAD2-006) 47870473-47930855 protein_coding
ENST00000591214 (SMAD2-003) 47844912-47930842 protein_coding
ENSG00000215474 (SKOR2)
SKI family transcriptional corepressor 2 		ENST00000400404 (SKOR2-001) 47231123-47249183 protein_coding
ENST00000425639 (SKOR2-002) 47219922-47249183 protein_coding
ENST00000620245 (SKOR2-201) 47212089-47249183 protein_coding
ENSG00000267156 (TPMTP1)
thiopurine S-methyltransferase pseudogene 1 		ENST00000592307 (TPMTP1-001) 47630112-47630848 processed_pseudogene
ENSG00000267187 (RP11-767C4.1)
 ENST00000586404 (RP11-767C4.1-001) 47703175-47703745 processed_pseudogene
ENSG00000279367 (RP11-157P23.1)
 ENST00000625076 (RP11-157P23.1-001) 47501172-47503106 TEC
CIL_0008OV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs802 VISTA 10090 18:76273836-76874483
GeneTranscriptPositionBiotype
ENSMUSG00000024563 (Smad2)
SMAD family member 2 		ENSMUST00000025453 (Smad2-002) 76261121-76305294 protein_coding
ENSMUST00000091831 (Smad2-003) 76241701-76304730 protein_coding
ENSMUST00000113930 (Smad2-004) 76262492-76302642 protein_coding
ENSMUST00000165084 (Smad2-007) 76262492-76299837 protein_coding
ENSMUST00000168423 (Smad2-001) 76241580-76305731 protein_coding
ENSMUST00000171256 (Smad2-005) 76242046-76298450 protein_coding
ENSMUST00000172198 (Smad2-006) 76242174-76299893 protein_coding
ENSMUSG00000091519 (Skor2)
SKI family transcriptional corepressor 2 		ENSMUST00000166956 (Skor2-201) 76856405-76900342 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008OV_0001ENSG00000175387ENST00000262160ENST00000356825ENST00000402690ENST00000585978ENST00000586040ENST00000586487ENST00000586514ENST00000587269ENST00000587353ENST00000587421ENST00000589877ENST00000591214ENSG00000215474ENST00000400404ENST00000425639ENST00000620245ENSG00000267156ENST00000592307ENSG00000267187ENST00000586404ENSG00000279367ENST00000625076CIL_0008OV_0002ENSMUSG00000024563ENSMUST00000025453ENSMUST00000091831ENSMUST00000113930ENSMUST00000165084ENSMUST00000168423ENSMUST00000171256ENSMUST00000172198ENSMUSG00000091519ENSMUST00000166956
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008OV_0001ENSG00000175387ENST00000262160ENST00000356825ENST00000402690ENST00000586040ENST00000586514ENST00000591214ENSG00000215474ENST00000400404ENST00000425639ENST00000620245ENSG00000267156ENST00000592307ENSG00000267187ENST00000586404ENSG00000279367ENST00000625076CIL_0008OV_0002ENSMUSG00000024563ENSMUST00000025453ENSMUST00000091831ENSMUST00000113930ENSMUST00000168423ENSMUST00000171256ENSMUSG00000091519ENSMUST00000166956
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175387 ENST00000262160 0.538±0.00 0.833±0.00 0.669±0.00 0.586±0.13 0.770±0.04 0.616±0.23 0.272±0.01 0.356±0.04 0.401±0.27 0.642±0.29 0.126±0.00 0.610±0.22 0.246±0.07 0.712±0.11
ENST00000356825 5.310±0.00 1.713±0.00 2.442±0.00 1.656±0.06 2.856±0.69 2.436±0.55 1.367±0.00 1.650±0.96 1.328±0.67 1.993±0.37 1.320±0.53 3.194±1.04 1.573±0.22 2.582±0.84
ENST00000402690 N/A N/A N/A N/A 0.996±0.00 1.576±0.00 0.820±0.00 0.468±0.00 1.301±0.00 2.846±0.00 N/A N/A N/A N/A
ENST00000585978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586040 19.784±0.00 8.224±0.00 N/A 7.175±1.37 10.963±5.00 13.581±7.82 6.061±0.96 5.672±3.45 5.851±3.27 9.697±0.00 7.426±4.90 9.347±4.79 10.039±1.60 15.862±6.37
ENST00000586487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586514 N/A N/A N/A 7.424±0.00 10.539±0.00 N/A 5.284±0.00 5.058±0.00 14.115±0.00 15.294±0.00 N/A N/A N/A N/A
ENST00000587269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591214 N/A N/A N/A N/A N/A N/A N/A 2.635±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000215474 ENST00000400404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.638±0.00
ENST00000425639 N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.854±0.00
ENST00000620245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.685±0.04
ENSG00000267156 ENST00000592307 0.180±0.00 0.181±0.00 N/A 0.500±0.00 0.144±0.00 0.566±0.00 0.410±0.00 0.843±0.00 0.903±0.00 0.169±0.00 0.039±0.00 0.072±0.00 N/A 0.084±0.05
ENSG00000267187 ENST00000586404 N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.087±0.00
ENSG00000279367 ENST00000625076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024563 ENSMUST00000025453 3.668±1.27 8.007±1.26 N/A 2.376±0.08 5.395±2.47 4.961±1.24 2.050±0.20 3.223±1.43 2.737±0.94 2.782±1.32 N/A 6.271±1.90 6.911±0.50 2.185±0.18
ENSMUST00000091831 4.548±0.00 5.429±1.84 N/A 6.828±4.28 2.160±0.00 3.289±0.63 1.982±1.05 2.359±0.32 1.535±0.58 1.962±0.00 0.786±0.08 11.690±10.26 28.600±12.77 6.037±4.57
ENSMUST00000113930 N/A 7.610±0.00 N/A 6.452±1.58 N/A N/A N/A 2.812±0.75 1.598±0.00 5.772±2.15 N/A 6.173±0.00 9.068±0.00 N/A
ENSMUST00000165084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168423 3.188±0.71 N/A 11.107±5.03 6.747±4.10 4.024±1.81 1.055±0.07 1.492±0.37 1.466±0.38 2.888±1.38 2.279±0.23 1.703±0.56 4.317±3.11 10.246±4.69 1.000±0.39
ENSMUST00000171256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.073±0.00
ENSMUST00000172198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000091519 ENSMUST00000166956 N/A N/A N/A 0.590±0.50 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A 0.022±0.02

Loading