C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008QX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2098 VISTA 9606 3:61508217-62112191
GeneTranscriptPositionBiotype
ENSG00000144724 (PTPRG)
protein tyrosine phosphatase, receptor type, G 		ENST00000295874 (PTPRG-002) 61561911-62293329 protein_coding
ENST00000468576 (PTPRG-008) 62243805-62263465 retained_intron
ENST00000474889 (PTPRG-001) 61561911-62297613 protein_coding
ENST00000475012 (PTPRG-005) 62217583-62293551 processed_transcript
ENST00000475527 (PTPRG-003) 61561851-61751049 processed_transcript
ENST00000485215 (PTPRG-007) 62243576-62267813 processed_transcript
ENST00000495879 (PTPRG-006) 61561569-61771395 processed_transcript
ENST00000615556 (PTPRG-201) 61989621-62294898 protein_coding
ENST00000618938 (PTPRG-202) 61989621-62294898 protein_coding
ENSG00000226360 (RPL10AP6)
ribosomal protein L10a pseudogene 6 		ENST00000472730 (RPL10AP6-001) 61742455-61743106 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008QX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2098 VISTA 10090 14:11475621-12079078
GeneTranscriptPositionBiotype
ENSMUSG00000021745 (Ptprg)
protein tyrosine phosphatase, receptor type, G 		ENSMUST00000022264 (Ptprg-001) 11553532-12242041 protein_coding
ENSMUST00000119888 (Ptprg-004) 12189943-12238563 protein_coding
ENSMUST00000134290 (Ptprg-005) 12218946-12223556 processed_transcript
ENSMUST00000142917 (Ptprg-002) 11553553-12238564 nonsense_mediated_decay
ENSMUST00000148113 (Ptprg-003) 11553581-11964131 retained_intron
ENSMUST00000155727 (Ptprg-006) 12091160-12122132 protein_coding
ENSMUSG00000085883 (Gm3848)
predicted gene 3848 		ENSMUST00000136693 (Gm3848-001) 11965447-11981223 antisense
ENSMUST00000151564 (Gm3848-002) 11980198-11981208 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008QX_0001ENSG00000144724ENST00000295874ENST00000468576ENST00000474889ENST00000475012ENST00000475527ENST00000485215ENST00000495879ENST00000615556ENST00000618938ENSG00000226360ENST00000472730CIL_0008QX_0002ENSMUSG00000021745ENSMUST00000022264ENSMUST00000119888ENSMUST00000134290ENSMUST00000142917ENSMUST00000148113ENSMUST00000155727ENSMUSG00000085883ENSMUST00000136693ENSMUST00000151564
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008QX_0001ENSG00000144724ENST00000295874ENST00000474889ENST00000475012ENST00000475527ENST00000495879ENSG00000226360ENST00000472730CIL_0008QX_0002ENSMUSG00000021745ENSMUST00000022264ENSMUST00000119888ENSMUST00000142917ENSMUST00000148113ENSMUST00000155727ENSMUSG00000085883ENSMUST00000136693ENSMUST00000151564
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144724 ENST00000295874 N/A N/A 3.194±0.00 2.599±0.00 4.293±0.00 3.634±0.00 2.248±0.30 2.368±0.00 1.769±1.08 8.137±0.00 N/A 3.321±2.50 2.308±0.00 2.919±0.00
ENST00000468576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474889 N/A 2.775±0.00 N/A 3.196±1.38 4.265±0.00 5.882±0.00 0.782±0.09 5.413±5.01 1.039±0.25 1.511±0.00 N/A 0.613±0.32 1.612±0.92 4.519±1.50
ENST00000475012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.409±0.00 0.798±0.00 N/A 3.139±0.00
ENST00000475527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.801±0.00 N/A N/A N/A
ENST00000485215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495879 N/A N/A 2.771±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226360 ENST00000472730 0.375±0.00 0.313±0.00 N/A 0.055±0.01 0.480±0.02 0.297±0.00 0.140±0.07 0.145±0.00 0.435±0.31 0.174±0.13 0.374±0.00 0.591±0.47 0.360±0.28 0.469±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021745 ENSMUST00000022264 4.148±0.54 8.968±2.71 2.973±0.40 6.075±2.97 1.866±0.61 1.782±0.60 2.553±0.04 3.043±0.92 1.175±0.80 7.921±0.34 1.499±0.55 5.731±2.30 1.293±0.20 0.432±0.07
ENSMUST00000119888 N/A N/A N/A N/A N/A N/A 2.929±0.00 N/A 0.341±0.06 N/A N/A 4.922±0.00 0.938±0.00 1.216±0.00
ENSMUST00000134290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142917 6.214±1.08 8.930±1.55 N/A 3.190±1.62 3.846±0.83 3.533±1.22 3.387±0.70 4.570±1.24 1.134±0.74 8.845±1.69 N/A 16.852±7.39 0.844±0.27 1.033±0.53
ENSMUST00000148113 N/A 10.469±0.25 N/A N/A 7.556±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155727 N/A N/A N/A N/A 27.497±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085883 ENSMUST00000136693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.770±0.43 N/A 1.660±0.84
ENSMUST00000151564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.486±1.54

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