C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008S5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1489 VISTA 9606 17:70957148-71558770
GeneTranscriptPositionBiotype
ENSG00000260785 (CASC17)
cancer susceptibility candidate 17 (non-protein coding) 		ENST00000569074 (CASC17-001) 71097775-71202177 lincRNA
ENSG00000271101 (RP11-1003J3.1)
 ENST00000604782 (RP11-1003J3.1-001) 71011997-71013587 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008S5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1489 VISTA 10090 11:111727526-112329618
GeneTranscriptPositionBiotype
ENSMUSG00000086752 (Gm11674)
predicted gene 11674 		ENSMUST00000124855 (Gm11674-001) 111796347-111800876 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBrainLiverLungOvaryTestisCIL_0008S5_0001ENSG00000260785ENST00000569074ENSG00000271101ENST00000604782CIL_0008S5_0002ENSMUSG00000086752ENSMUST00000124855
Region; Gene Transcript'; AdiposeBrainLiverLungOvaryTestisCIL_0008S5_0001ENSG00000260785ENST00000569074ENSG00000271101ENST00000604782CIL_0008S5_0002ENSMUSG00000086752ENSMUST00000124855
Gene Transcript Adipose Brain Liver Lung Ovary Testis
ENSG00000260785 ENST00000569074 N/A 0.016±0.00 N/A N/A 0.026±0.00 0.630±0.30
ENSG00000271101 ENST00000604782 0.052±0.00 N/A N/A 0.033±0.00 N/A 0.033±0.00
Gene Transcript Adipose Brain Liver Lung Ovary Testis
ENSMUSG00000086752 ENSMUST00000124855 N/A N/A 0.002±0.00 N/A N/A N/A

Loading