C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008TV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs583 VISTA 9606 9:81523283-82124424
GeneTranscriptPositionBiotype
ENSG00000186788 (SPATA31D3)
SPATA31 subfamily D, member 3 		ENST00000334208 (SPATA31D3-002) 81943559-81950094 processed_transcript
ENST00000445385 (SPATA31D3-001) 81943586-81950038 transcribed_unprocessed_pseudogene
ENSG00000196781 (TLE1)
transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) 		ENST00000376463 (TLE1-005) 81633469-81687368 protein_coding
ENST00000376472 (TLE1-201) 81584184-81688266 protein_coding
ENST00000376484 (TLE1-004) 81599865-81613522 protein_coding
ENST00000376499 (TLE1-001) 81583683-81689305 protein_coding
ENST00000418319 (TLE1-002) 81620454-81688448 protein_coding
ENST00000464999 (TLE1-003) 81611843-81620539 processed_transcript
ENST00000491534 (TLE1-006) 81611806-81620557 processed_transcript
ENSG00000214929 (SPATA31D1)
SPATA31 subfamily D, member 1 		ENST00000344803 (SPATA31D1-001) 81988772-81995256 protein_coding
ENST00000603921 (SPATA31D1-002) 81988788-81990148 retained_intron
ENSG00000230360 (DDX10P2)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 pseudogene 2 		ENST00000417796 (DDX10P2-001) 82086155-82088768 processed_pseudogene
ENSG00000231649 (SPATA31B1P)
SPATA31 subfamily B, member 1, pseudogene 		ENST00000434692 (SPATA31B1P-001) 82057647-82063682 unprocessed_pseudogene
ENSG00000233926 (RP11-154D17.1)
 ENST00000413050 (RP11-154D17.1-002) 81747943-81755452 lincRNA
ENST00000437181 (RP11-154D17.1-001) 81689713-81776900 lincRNA
ENSG00000237770 (SPATA31D2P)
SPATA31 subfamily D, member 2, pseudogene 		ENST00000429999 (SPATA31D2P-001) 81968838-81972070 processed_pseudogene
ENSG00000240632 (SPATA31D5P)
SPATA31 subfamily D, member 5, pseudogene 		ENST00000376459 (SPATA31D5P-001) 81913466-81919876 transcribed_unprocessed_pseudogene
ENST00000527857 (SPATA31D5P-002) 81913437-81919926 processed_transcript
ENSG00000263404 (AL158154.1)
 ENST00000581036 (AL158154.1-201) 81805996-81806081 miRNA
ENSG00000267559 (RP11-383M4.6)
 ENST00000585776 (RP11-383M4.6-001) 81930226-81977089 lincRNA
ENST00000592744 (RP11-383M4.6-002) 81946438-81976806 lincRNA
ENSG00000278507 (AL158154.2)
 ENST00000617048 (AL158154.2-201) 81887673-81887764 miRNA
CIL_0008TV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs583 VISTA 10090 4:72081989-72683115
GeneTranscriptPositionBiotype
ENSMUSG00000008305 (Tle1)
transducin-like enhancer of split 1, homolog of Drosophila E(spl) 		ENSMUST00000030095 (Tle1-008) 72118205-72200152 protein_coding
ENSMUST00000072695 (Tle1-001) 72117805-72200857 protein_coding
ENSMUST00000074216 (Tle1-201) 72117142-72200919 protein_coding
ENSMUST00000102848 (Tle1-006) 72117807-72200854 protein_coding
ENSMUST00000107337 (Tle1-002) 72157580-72200862 protein_coding
ENSMUST00000123259 (Tle1-009) 72118220-72120734 processed_transcript
ENSMUST00000132550 (Tle1-005) 72117810-72199092 retained_intron
ENSMUST00000134225 (Tle1-004) 72167182-72200893 processed_transcript
ENSMUST00000137075 (Tle1-007) 72158272-72199492 protein_coding
ENSMUST00000140154 (Tle1-003) 72138588-72141313 protein_coding
ENSMUSG00000083372 (Gm11235)
predicted gene 11235 		ENSMUST00000117763 (Gm11235-001) 72542666-72542998 processed_pseudogene
ENSMUSG00000084910 (C630043F03Rik)
RIKEN cDNA C630043F03 gene 		ENSMUST00000122923 (C630043F03Rik-001) 72201348-72215352 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008TV_0001ENSG00000186788ENST00000334208ENST00000445385ENSG00000196781ENST00000376463ENST00000376472ENST00000376499ENSG00000214929ENST00000344803ENSG00000230360ENST00000417796ENSG00000231649ENST00000434692ENSG00000233926ENST00000413050ENST00000437181ENSG00000237770ENST00000429999ENSG00000240632ENST00000376459ENST00000527857ENSG00000263404ENST00000581036ENSG00000267559ENST00000585776ENST00000592744ENSG00000278507ENST00000617048CIL_0008TV_0002ENSMUSG00000008305ENSMUST00000030095ENSMUST00000072695ENSMUST00000074216ENSMUST00000102848ENSMUST00000107337ENSMUST00000132550ENSMUST00000137075ENSMUSG00000083372ENSMUST00000117763ENSMUSG00000084910ENSMUST00000122923
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000186788 ENST00000334208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.578±0.04
ENST00000445385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.484±0.00
ENSG00000196781 ENST00000376463 4.201±0.00 8.016±0.00 N/A 7.751±0.00 5.539±0.00 4.410±0.00 1.561±0.00 3.948±1.27 6.141±0.00 2.880±0.00 5.336±0.00 6.766±0.44 4.989±1.37 8.118±1.99
ENST00000376472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.380±0.00 5.320±0.00 4.164±0.00
ENST00000376484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376499 8.915±0.00 6.928±0.00 N/A 4.314±0.00 10.961±0.00 13.495±0.00 0.974±0.86 4.371±2.97 3.239±0.00 N/A 4.406±0.00 8.075±1.18 5.242±0.31 12.221±0.00
ENST00000418319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214929 ENST00000344803 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A 1.781±1.23
ENST00000603921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230360 ENST00000417796 N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A 0.106±0.00 N/A N/A N/A 0.045±0.00
ENSG00000231649 ENST00000434692 N/A N/A N/A 0.005±0.00 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A 0.179±0.08
ENSG00000233926 ENST00000413050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A 0.141±0.04
ENST00000437181 0.021±0.00 0.108±0.00 N/A 0.201±0.13 0.134±0.00 0.010±0.00 0.020±0.00 0.043±0.00 N/A N/A N/A 0.055±0.00 N/A 0.069±0.04
ENSG00000237770 ENST00000429999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.274±0.18
ENSG00000240632 ENST00000376459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A 0.888±0.00
ENST00000527857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.584±0.16
ENSG00000263404 ENST00000581036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.162±0.00 N/A N/A
ENSG00000267559 ENST00000585776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 1.957±1.23
ENST00000592744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.639±0.00
ENSG00000278507 ENST00000617048 0.406±0.00 N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A 1.118±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008305 ENSMUST00000030095 6.501±0.76 N/A 3.541±0.25 N/A 2.968±0.83 3.967±0.41 0.865±0.26 1.883±0.45 4.603±1.86 4.582±1.28 0.953±0.17 7.901±1.58 1.549±0.34 1.531±0.59
ENSMUST00000072695 8.324±3.62 8.994±4.39 5.258±0.62 9.497±3.12 5.576±1.64 6.101±2.15 0.879±0.30 2.224±0.80 4.378±1.97 4.911±1.73 1.659±0.70 11.382±4.09 2.082±0.78 1.842±0.67
ENSMUST00000074216 6.344±0.51 4.059±0.99 N/A 5.957±0.34 2.447±0.54 2.376±0.73 0.358±0.14 1.248±0.00 1.847±1.09 6.179±2.86 0.330±0.00 10.663±3.81 0.638±0.00 0.732±0.00
ENSMUST00000102848 N/A 2.722±0.01 N/A 2.079±0.00 2.172±0.00 1.678±0.00 N/A 0.800±0.05 N/A 1.710±0.13 0.756±0.28 4.072±0.62 N/A 0.701±0.00
ENSMUST00000107337 10.127±1.69 7.993±1.58 6.551±0.08 13.283±0.00 5.363±0.70 6.546±1.60 0.938±0.01 3.047±1.08 9.760±4.06 7.597±1.54 2.732±0.56 11.474±2.79 2.620±0.95 2.386±0.23
ENSMUST00000123259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132550 N/A 7.080±0.13 N/A 8.017±0.02 N/A N/A N/A 2.155±0.00 N/A N/A N/A 12.219±0.00 N/A N/A
ENSMUST00000134225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137075 N/A N/A N/A 20.770±0.00 N/A N/A N/A N/A N/A N/A N/A 30.617±0.00 6.732±1.46 3.806±0.00
ENSMUST00000140154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083372 ENSMUST00000117763 N/A N/A 0.049±0.00 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A
ENSMUSG00000084910 ENSMUST00000122923 1.232±0.51 0.270±0.10 0.841±0.00 2.226±0.26 0.265±0.20 0.276±0.09 0.065±0.01 0.293±0.05 0.505±0.24 0.433±0.01 N/A 0.887±0.17 0.132±0.07 0.130±0.07

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