C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008U1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1688 VISTA 9606 14:68076040-68679058
GeneTranscriptPositionBiotype
ENSG00000240210 (RP11-204K16.1)
 ENST00000473054 (RP11-204K16.1-001) 68338728-68339528 processed_pseudogene
ENSG00000243546 (RN7SL108P)
RNA, 7SL, cytoplasmic 108, pseudogene 		ENST00000481903 (RN7SL108P-201) 68236243-68236539 misc_RNA
ENSG00000244677 (RN7SL706P)
RNA, 7SL, cytoplasmic 706, pseudogene 		ENST00000460079 (RN7SL706P-201) 68149617-68149908 misc_RNA
ENSG00000258477 (PPIAP6)
peptidylprolyl isomerase A (cyclophilin A) pseudogene 6 		ENST00000557078 (PPIAP6-001) 68421698-68422196 processed_pseudogene
ENSG00000258837 (CTD-2566J3.1)
 ENST00000554679 (CTD-2566J3.1-001) 68125004-68130196 antisense
ENSG00000259038 (CTD-2325P2.4)
 ENST00000556301 (CTD-2325P2.4-001) 68627166-68628445 antisense
ENSG00000274666 (CTD-2566J3.2)
 ENST00000619934 (CTD-2566J3.2-001) 68113706-68114144 unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008U1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1688 VISTA 10090 12:79431439-80034658
GeneTranscriptPositionBiotype
ENSMUSG00000059060 (Rad51b)
RAD51 homolog B 		ENSMUST00000079533 (Rad51b-201) 79297351-79508656 protein_coding
ENSMUST00000171210 (Rad51b-202) 79297351-79327463 protein_coding
ENSMUSG00000101696 (RP23-179D3.1)
predicted gene 28056 		ENSMUST00000190925 (RP23-179D3.1-001) 79963568-79963872 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008U1_0001ENSG00000240210ENST00000473054ENSG00000243546ENST00000481903ENSG00000244677ENST00000460079ENSG00000258477ENST00000557078ENSG00000258837ENST00000554679ENSG00000259038ENST00000556301ENSG00000274666ENST00000619934CIL_0008U1_0002ENSMUSG00000059060ENSMUST00000079533ENSMUST00000171210ENSMUSG00000101696ENSMUST00000190925
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008U1_0001ENSG00000240210ENST00000473054ENSG00000243546ENST00000481903ENSG00000244677ENST00000460079ENSG00000258477ENST00000557078ENSG00000258837ENST00000554679ENSG00000259038ENST00000556301ENSG00000274666ENST00000619934CIL_0008U1_0002ENSMUSG00000059060ENSMUST00000079533ENSMUST00000171210ENSMUSG00000101696ENSMUST00000190925
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000240210 ENST00000473054 0.082±0.00 0.132±0.00 N/A 0.072±0.00 0.093±0.00 0.064±0.00 0.020±0.00 0.045±0.00 0.059±0.00 0.043±0.00 0.134±0.00 0.029±0.00 N/A 0.119±0.00
ENSG00000243546 ENST00000481903 N/A 0.167±0.00 N/A N/A 0.229±0.00 N/A N/A 0.057±0.00 0.317±0.00 0.053±0.00 N/A 0.267±0.00 N/A N/A
ENSG00000244677 ENST00000460079 N/A N/A N/A N/A 1.801±0.00 N/A N/A N/A 0.729±0.00 N/A N/A N/A N/A N/A
ENSG00000258477 ENST00000557078 N/A 0.064±0.00 N/A N/A 1.124±0.00 0.030±0.00 0.028±0.00 0.159±0.00 0.389±0.00 0.030±0.00 0.055±0.00 0.127±0.00 N/A 0.058±0.00
ENSG00000258837 ENST00000554679 N/A N/A 0.521±0.00 N/A 0.040±0.00 0.597±0.13 N/A 0.162±0.00 N/A N/A N/A 0.092±0.04 N/A 0.050±0.00
ENSG00000259038 ENST00000556301 0.231±0.00 N/A N/A 2.848±0.26 0.585±0.00 0.690±0.00 N/A 0.082±0.00 0.900±0.69 2.173±0.00 N/A 1.683±0.00 0.818±0.20 0.590±0.00
ENSG00000274666 ENST00000619934 N/A N/A 0.191±0.00 0.835±0.00 1.003±0.00 0.385±0.00 0.163±0.00 N/A N/A 0.110±0.00 N/A 0.113±0.02 0.134±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000059060 ENSMUST00000079533 N/A N/A 0.057±0.02 0.023±0.00 0.124±0.05 0.079±0.03 0.059±0.02 N/A 0.151±0.07 0.115±0.04 0.032±0.00 0.223±0.05 0.137±0.07 0.259±0.07
ENSMUST00000171210 0.142±0.09 0.239±0.09 N/A 0.218±0.12 0.229±0.15 0.372±0.21 0.092±0.02 0.052±0.00 1.472±0.87 N/A 0.130±0.09 0.805±0.32 1.022±0.41 0.207±0.04
ENSMUSG00000101696 ENSMUST00000190925 0.259±0.00 N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.093±0.19 N/A 0.373±0.12

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