C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008UJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1333 VISTA 9606 13:35198777-35801835
GeneTranscriptPositionBiotype
ENSG00000133083 (DCLK1)
doublecortin-like kinase 1
ENST00000255448 (DCLK1-006) 35771341-36131306 protein_coding
ENST00000360631 (DCLK1-010) 35768963-36131306 protein_coding
ENST00000379892 (DCLK1-001) 35849923-36131306 protein_coding
ENST00000379893 (DCLK1-011) 35771339-35855642 protein_coding
ENST00000460982 (DCLK1-008) 35845900-35855784 processed_transcript
ENST00000477664 (DCLK1-013) 35787858-35793479 processed_transcript
ENST00000486239 (DCLK1-012) 35805316-35808337 processed_transcript
ENST00000615680 (DCLK1-201) 35768652-35855861 protein_coding
ENSG00000180660 (MAB21L1)
mab-21-like 1 (C. elegans)
ENST00000379919 (MAB21L1-001) 35474182-35477209 protein_coding
ENSG00000221519 (AL390071.1)
ENST00000408592 (AL390071.1-201) 35494428-35494519 miRNA
ENSG00000234835 (PHBP13)
prohibitin pseudogene 13
ENST00000453244 (PHBP13-001) 35251070-35251829 processed_pseudogene
ENSG00000236036 (LINC00445)
long intergenic non-protein coding RNA 445
ENST00000422430 (LINC00445-001) 35697524-35699001 lincRNA
ENST00000456848 (LINC00445-002) 35697727-35699256 lincRNA
CIL_0008UJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1333 VISTA 10090 3:55453971-56057759
GeneTranscriptPositionBiotype
ENSMUSG00000027797 (Dclk1)
doublecortin-like kinase 1
ENSMUST00000054237 (Dclk1-201) 55242526-55539064 protein_coding
ENSMUST00000070418 (Dclk1-202) 55461758-55539064 protein_coding
ENSMUST00000167204 (Dclk1-203) 55242526-55471317 protein_coding
ENSMUSG00000027799 (Nbea)
neurobeachin
ENSMUST00000029374 (Nbea-201) 55625205-56183701 protein_coding
ENSMUSG00000056947 (Mab21l1)
mab-21-like 1 (C. elegans)
ENSMUST00000075422 (Mab21l1-201) 55782510-55785285 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UJ_0001ENSG00000133083ENST00000255448ENST00000360631ENST00000379892ENST00000379893ENST00000460982ENST00000477664ENST00000486239ENST00000615680ENSG00000180660ENST00000379919ENSG00000221519ENST00000408592ENSG00000234835ENST00000453244ENSG00000236036ENST00000422430ENST00000456848CIL_0008UJ_0002ENSMUSG00000027797ENSMUST00000054237ENSMUST00000070418ENSMUST00000167204ENSMUSG00000027799ENSMUST00000029374ENSMUSG00000056947ENSMUST00000075422
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UJ_0001ENSG00000133083ENST00000255448ENST00000360631ENST00000379892ENST00000379893ENST00000460982ENST00000615680ENSG00000180660ENST00000379919ENSG00000221519ENST00000408592ENSG00000234835ENST00000453244ENSG00000236036ENST00000422430ENST00000456848CIL_0008UJ_0002ENSMUSG00000027797ENSMUST00000054237ENSMUST00000070418ENSMUST00000167204ENSMUSG00000027799ENSMUST00000029374ENSMUSG00000056947ENSMUST00000075422
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133083 ENST00000255448 1.592±0.00 N/A 0.445±0.00 15.994±4.26 1.119±0.00 3.045±0.00 1.152±0.00 0.275±0.00 3.155±0.00 0.378±0.17 0.212±0.02 0.884±0.93 0.014±0.00 1.650±0.50
ENST00000360631 1.458±0.00 1.255±0.00 N/A 13.849±0.00 0.987±0.28 0.708±0.49 0.399±0.07 0.227±0.00 1.185±0.00 0.181±0.03 0.113±0.00 0.632±0.58 N/A 1.107±0.00
ENST00000379892 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.981±0.00 N/A N/A 0.012±0.00 N/A
ENST00000379893 1.931±0.00 1.816±0.00 N/A 27.760±6.03 2.086±0.70 1.317±0.00 0.800±0.00 N/A 0.008±0.00 0.277±0.00 0.182±0.00 1.320±0.70 0.113±0.05 1.391±0.00
ENST00000460982 N/A N/A N/A N/A N/A 0.735±0.28 0.852±0.00 0.199±0.16 0.659±0.64 0.697±0.00 N/A 0.262±0.24 0.022±0.02 2.229±0.00
ENST00000477664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615680 N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000180660 ENST00000379919 0.470±0.00 N/A N/A N/A 0.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221519 ENST00000408592 N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234835 ENST00000453244 N/A N/A N/A 0.059±0.00 N/A 0.324±0.00 0.119±0.10 N/A N/A N/A N/A 0.081±0.02 N/A 0.144±0.12
ENSG00000236036 ENST00000422430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.799±0.98
ENST00000456848 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A 0.965±0.37
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027797 ENSMUST00000054237 0.280±0.00 0.114±0.04 0.252±0.06 26.649±10.24 0.756±0.26 1.358±0.37 0.143±0.07 0.101±0.03 0.042±0.02 0.327±0.14 0.056±0.02 0.882±0.56 N/A 0.495±0.31
ENSMUST00000070418 5.149±0.00 0.101±0.00 N/A 22.904±20.59 N/A 0.682±0.07 N/A 0.041±0.00 0.040±0.00 N/A 0.054±0.02 0.765±0.43 0.017±0.01 N/A
ENSMUST00000167204 1.892±0.70 0.256±0.11 1.037±0.19 15.212±3.17 3.081±1.17 0.742±0.27 0.335±0.01 0.184±0.04 0.057±0.06 0.694±0.07 0.153±0.08 1.130±0.38 0.181±0.29 N/A
ENSMUSG00000027799 ENSMUST00000029374 4.053±2.02 1.707±1.04 1.253±0.62 20.773±6.79 0.840±0.48 0.706±0.27 1.083±0.21 0.949±0.68 0.151±0.08 3.072±1.26 0.234±0.04 3.357±1.36 0.304±0.12 1.340±0.81
ENSMUSG00000056947 ENSMUST00000075422 0.132±0.00 0.633±0.39 0.233±0.04 20.352±16.49 0.571±0.31 0.276±0.04 N/A N/A 0.022±0.01 0.145±0.06 0.304±0.09 0.219±0.16 0.023±0.01 0.071±0.04

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