C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008UZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs295 VISTA 9606 1:48347085-48947691
GeneTranscriptPositionBiotype
ENSG00000132122 (SPATA6)
spermatogenesis associated 6 		ENST00000371841 (SPATA6-005) 48305799-48400850 protein_coding
ENST00000371843 (SPATA6-002) 48297837-48472010 protein_coding
ENST00000371847 (SPATA6-001) 48295372-48472173 protein_coding
ENST00000396199 (SPATA6-201) 48295374-48472208 protein_coding
ENST00000463938 (SPATA6-003) 48399052-48472016 processed_transcript
ENST00000465990 (SPATA6-009) 48411464-48451586 processed_transcript
ENST00000471975 (SPATA6-008) 48411487-48472155 processed_transcript
ENST00000487543 (SPATA6-007) 48399583-48472085 nonsense_mediated_decay
ENST00000487629 (SPATA6-006) 48355445-48359722 processed_transcript
ENST00000490850 (SPATA6-004) 48305805-48402744 processed_transcript
ENST00000603831 (SPATA6-010) 48298644-48400911 nonsense_mediated_decay
ENSG00000162373 (BEND5)
BEN domain containing 5 		ENST00000371833 (BEND5-001) 48727523-48776918 protein_coding
ENST00000463562 (BEND5-002) 48727870-48776932 retained_intron
ENST00000476079 (BEND5-004) 48727867-48758933 processed_transcript
ENST00000476096 (BEND5-005) 48727873-48759255 processed_transcript
ENST00000480399 (BEND5-003) 48759207-48776969 processed_transcript
ENST00000489956 (BEND5-006) 48761048-48776735 retained_intron
ENSG00000186094 (AGBL4)
ATP/GTP binding protein-like 4 		ENST00000334103 (AGBL4-201) 48534173-48663244 protein_coding
ENST00000371836 (AGBL4-003) 48817507-50023900 protein_coding
ENST00000371838 (AGBL4-004) 48634208-50023913 protein_coding
ENST00000371839 (AGBL4-001) 48532855-50023913 protein_coding
ENST00000416121 (AGBL4-002) 48583870-49045714 protein_coding
ENST00000497451 (AGBL4-005) 49527228-49851518 processed_transcript
ENSG00000232514 (RP11-329A14.2)
 ENST00000416622 (RP11-329A14.2-001) 48497263-48497736 processed_pseudogene
ENSG00000235105 (RP11-329A14.1)
 ENST00000412769 (RP11-329A14.1-001) 48435967-48437223 processed_pseudogene
CIL_0008UZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs295 VISTA 10090 4:111252851-111853446
GeneTranscriptPositionBiotype
ENSMUSG00000028545 (Bend5)
BEN domain containing 5 		ENSMUST00000030274 (Bend5-001) 111415006-111460298 protein_coding
ENSMUST00000123667 (Bend5-005) 111433319-111459927 processed_transcript
ENSMUST00000129760 (Bend5-002) 111415088-111459920 processed_transcript
ENSMUST00000130523 (Bend5-004) 111415047-111433246 processed_transcript
ENSMUST00000138394 (Bend5-006) 111415207-111420538 processed_transcript
ENSMUST00000139876 (Bend5-003) 111433197-111460296 protein_coding
ENSMUSG00000034401 (Spata6)
spermatogenesis associated 6 		ENSMUST00000038868 (Spata6-001) 111719984-111829142 protein_coding
ENSMUST00000070513 (Spata6-006) 111720009-111768757 protein_coding
ENSMUST00000084354 (Spata6-004) 111720205-111829184 protein_coding
ENSMUST00000122820 (Spata6-002) 111720010-111807054 processed_transcript
ENSMUST00000123718 (Spata6-009) 111720129-111779061 processed_transcript
ENSMUST00000125999 (Spata6-010) 111777597-111780271 processed_transcript
ENSMUST00000132802 (Spata6-012) 111822263-111828202 processed_transcript
ENSMUST00000134000 (Spata6-013) 111720103-111779596 processed_transcript
ENSMUST00000137072 (Spata6-011) 111805861-111822802 processed_transcript
ENSMUST00000140366 (Spata6-007) 111720059-111768817 processed_transcript
ENSMUST00000143879 (Spata6-005) 111777558-111829134 processed_transcript
ENSMUST00000149834 (Spata6-014) 111774799-111828194 processed_transcript
ENSMUST00000153746 (Spata6-003) 111720038-111778291 protein_coding
ENSMUST00000156179 (Spata6-008) 111720063-111779011 processed_transcript
ENSMUSG00000061298 (Agbl4)
ATP/GTP binding protein-like 4 		ENSMUST00000080744 (Agbl4-010) 110397791-111657510 protein_coding
ENSMUST00000097920 (Agbl4-009) 110397791-111657510 protein_coding
ENSMUST00000106587 (Agbl4-004) 110397698-110662970 protein_coding
ENSMUST00000106589 (Agbl4-005) 110397661-110955596 protein_coding
ENSMUST00000106591 (Agbl4-003) 110397698-111567010 protein_coding
ENSMUST00000106592 (Agbl4-001) 110397698-111664324 protein_coding
ENSMUST00000136433 (Agbl4-006) 111118841-111259039 processed_transcript
ENSMUST00000142460 (Agbl4-008) 111566725-111657507 processed_transcript
ENSMUST00000148038 (Agbl4-002) 111118911-111620490 protein_coding
ENSMUST00000154123 (Agbl4-007) 111566695-111656569 processed_transcript
ENSMUSG00000081068 (Gm12804)
predicted gene 12804 		ENSMUST00000121030 (Gm12804-001) 111290118-111291116 processed_pseudogene
ENSMUSG00000082686 (Gm12961)
predicted gene 12961 		ENSMUST00000120507 (Gm12961-001) 111790621-111791670 processed_pseudogene
ENSMUSG00000083904 (Gm12805)
predicted gene 12805 		ENSMUST00000117305 (Gm12805-001) 111319558-111320605 processed_pseudogene
ENSMUSG00000084673 (n-R5s191)
nuclear encoded rRNA 5S 191 		ENSMUST00000122724 (n-R5s191-201) 111427818-111427933 rRNA
ENSMUSG00000100139 (AL671895.1)
 ENSMUST00000073495 (AL671895.1-201) 111807358-111808426 pseudogene
ENSMUSG00000100514 (Gm12960)
predicted gene 12960 		ENSMUST00000120017 (Gm12960-001) 111807358-111808423 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UZ_0001ENSG00000132122ENST00000371841ENST00000371843ENST00000371847ENST00000396199ENST00000463938ENST00000465990ENST00000471975ENST00000487543ENST00000487629ENST00000490850ENST00000603831ENSG00000162373ENST00000371833ENST00000463562ENST00000476079ENST00000476096ENST00000480399ENST00000489956ENSG00000186094ENST00000334103ENST00000371836ENST00000371838ENST00000371839ENST00000416121ENST00000497451ENSG00000232514ENST00000416622ENSG00000235105ENST00000412769CIL_0008UZ_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UZ_0001ENSG00000132122ENST00000371841ENST00000371843ENST00000371847ENST00000396199ENST00000463938ENST00000487629ENST00000490850ENST00000603831ENSG00000162373ENST00000371833ENST00000463562ENST00000476079ENST00000476096ENST00000480399ENST00000489956ENSG00000186094ENST00000334103ENST00000371836ENST00000371838ENST00000371839ENST00000416121ENST00000497451ENSG00000232514ENST00000416622ENSG00000235105ENST00000412769CIL_0008UZ_0002ENSMUSG00000028545ENSMUST00000030274ENSMUST00000123667ENSMUST00000129760ENSMUST00000130523ENSMUST00000139876ENSMUSG00000034401ENSMUST00000038868ENSMUST00000070513ENSMUST00000084354ENSMUST00000122820ENSMUST00000132802ENSMUST00000137072ENSMUST00000140366ENSMUST00000143879ENSMUST00000149834ENSMUST00000153746ENSMUSG00000061298ENSMUST00000080744ENSMUST00000097920ENSMUST00000106587ENSMUST00000106589ENSMUST00000106591ENSMUST00000106592ENSMUST00000142460ENSMUST00000154123ENSMUSG00000081068ENSMUST00000121030ENSMUSG00000082686ENSMUST00000120507ENSMUSG00000083904ENSMUST00000117305ENSMUSG00000084673ENSMUST00000122724ENSMUSG00000100139ENSMUST00000073495ENSMUSG00000100514ENSMUST00000120017
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132122 ENST00000371841 2.189±0.00 N/A N/A N/A 2.201±0.00 N/A N/A N/A N/A 2.866±0.00 0.545±0.07 0.995±0.00 1.150±0.00 30.770±0.00
ENST00000371843 0.742±0.00 0.428±0.00 0.798±0.00 0.838±0.00 N/A N/A 0.338±0.00 N/A 1.934±0.00 N/A N/A 0.752±0.00 0.336±0.08 13.039±7.36
ENST00000371847 N/A 0.321±0.00 0.774±0.00 0.659±0.00 0.657±0.00 0.195±0.00 0.348±0.08 1.064±0.00 0.268±0.00 0.573±0.00 N/A 1.497±0.80 0.778±0.20 4.128±1.44
ENST00000396199 N/A N/A N/A 0.615±0.00 0.212±0.00 0.724±0.00 N/A 0.450±0.28 N/A 1.095±0.16 N/A N/A N/A N/A
ENST00000463938 N/A N/A N/A 1.801±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487629 N/A N/A N/A N/A N/A N/A N/A 1.256±0.00 N/A N/A N/A N/A N/A N/A
ENST00000490850 N/A N/A N/A 1.883±0.00 N/A 1.759±0.00 1.123±0.00 N/A 3.713±0.00 4.332±0.00 0.131±0.00 N/A N/A 75.549±0.00
ENST00000603831 N/A 0.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.405±0.00
ENSG00000162373 ENST00000371833 0.384±0.00 0.983±0.00 0.357±0.00 1.767±0.16 0.169±0.00 1.117±0.00 0.168±0.08 0.723±0.00 0.195±0.00 0.260±0.00 0.175±0.00 1.660±1.07 0.290±0.15 1.389±0.44
ENST00000463562 0.612±0.00 2.399±0.00 N/A 5.301±0.00 0.427±0.36 2.589±0.00 0.250±0.17 3.411±0.00 0.184±0.00 0.434±0.28 N/A 2.682±2.51 0.493±0.36 1.593±0.80
ENST00000476079 N/A 1.757±0.00 1.086±0.00 3.999±0.00 0.639±0.11 N/A N/A N/A 0.421±0.00 1.066±0.10 1.782±1.16 1.961±0.64 N/A 1.614±0.00
ENST00000476096 N/A 2.455±0.00 N/A N/A 0.422±0.00 0.176±0.00 N/A N/A N/A 1.367±0.00 0.650±0.00 N/A N/A N/A
ENST00000480399 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489956 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000186094 ENST00000334103 N/A N/A N/A N/A N/A N/A N/A 1.012±0.00 N/A N/A N/A 0.031±0.00 0.414±0.00 N/A
ENST00000371836 N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A 0.193±0.01 N/A N/A N/A N/A
ENST00000371838 N/A N/A 0.588±0.00 1.073±0.00 N/A 0.098±0.07 N/A N/A 0.030±0.00 N/A N/A 0.182±0.14 N/A 0.195±0.00
ENST00000371839 0.037±0.00 N/A 0.436±0.00 1.908±0.90 0.195±0.00 N/A 0.046±0.00 0.333±0.00 0.046±0.00 0.216±0.00 N/A 0.059±0.06 0.223±0.06 0.433±0.06
ENST00000416121 0.025±0.00 0.148±0.00 0.117±0.00 N/A 0.058±0.00 N/A N/A 0.097±0.00 0.077±0.05 N/A 0.185±0.18 N/A N/A 0.194±0.00
ENST00000497451 N/A N/A N/A N/A 0.754±0.00 N/A 0.269±0.00 N/A N/A N/A N/A 0.254±0.00 N/A 0.332±0.00
ENSG00000232514 ENST00000416622 N/A N/A N/A 0.353±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235105 ENST00000412769 N/A N/A N/A N/A N/A N/A N/A N/A 0.360±0.00 N/A 0.298±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028545 ENSMUST00000030274 0.742±0.62 5.501±0.81 2.708±0.09 6.801±3.36 2.045±1.56 1.039±0.13 0.614±0.28 5.038±0.59 0.110±0.06 0.719±0.28 0.270±0.12 3.797±1.66 7.774±3.05 1.208±0.43
ENSMUST00000123667 N/A N/A N/A N/A 0.318±0.00 N/A N/A N/A N/A N/A N/A 2.368±0.85 N/A N/A
ENSMUST00000129760 0.996±0.86 N/A 4.738±0.47 8.731±4.44 0.708±0.36 1.353±0.85 1.365±0.13 5.249±2.18 0.195±0.08 1.183±0.18 0.260±0.10 2.183±0.89 15.878±9.84 1.432±0.68
ENSMUST00000130523 1.823±0.15 8.974±3.63 N/A N/A 2.885±1.06 1.237±0.45 N/A N/A N/A 1.025±0.49 N/A 2.210±0.00 N/A N/A
ENSMUST00000138394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139876 N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 N/A 0.160±0.00 N/A N/A N/A
ENSMUSG00000034401 ENSMUST00000038868 4.498±0.58 2.220±0.20 9.697±0.80 2.568±0.19 3.397±0.57 1.589±0.56 1.479±0.29 4.034±0.47 0.852±0.36 5.699±0.38 0.941±0.28 3.091±1.39 2.472±1.43 75.095±13.47
ENSMUST00000070513 8.757±0.48 15.426±4.84 N/A N/A 8.648±2.04 5.404±2.27 N/A 6.186±1.69 0.466±0.20 8.753±2.88 N/A 11.488±4.37 N/A N/A
ENSMUST00000084354 N/A N/A N/A 0.247±0.00 N/A N/A N/A N/A 0.263±0.07 N/A N/A 4.464±0.95 1.577±0.88 N/A
ENSMUST00000122820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.693±0.00 N/A N/A
ENSMUST00000123718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132802 N/A N/A N/A N/A N/A N/A N/A N/A 0.834±0.00 N/A N/A N/A N/A N/A
ENSMUST00000134000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137072 N/A N/A N/A 11.340±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 63.162±0.00 N/A
ENSMUST00000140366 N/A N/A N/A N/A N/A N/A N/A N/A 0.259±0.05 N/A N/A N/A N/A N/A
ENSMUST00000143879 2.699±0.00 N/A N/A N/A 1.872±0.00 1.072±0.00 N/A N/A 0.261±0.25 N/A 0.425±0.04 3.982±1.63 2.219±1.18 67.635±19.37
ENSMUST00000149834 N/A N/A N/A 1.719±0.00 2.838±0.00 N/A N/A N/A N/A N/A N/A 10.682±5.74 14.861±3.00 888.836±0.00
ENSMUST00000153746 N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A
ENSMUST00000156179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061298 ENSMUST00000080744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.01 N/A 7.779±0.22
ENSMUST00000097920 N/A 0.082±0.01 N/A 0.441±0.01 0.020±0.00 N/A N/A 0.061±0.01 N/A 0.087±0.05 N/A 0.224±0.13 0.029±0.00 28.986±13.71
ENSMUST00000106587 N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 0.003±0.00 N/A N/A N/A N/A N/A
ENSMUST00000106589 N/A 0.142±0.00 N/A N/A N/A N/A N/A 0.076±0.00 N/A 0.228±0.11 N/A N/A 0.071±0.00 N/A
ENSMUST00000106591 N/A N/A 0.006±0.00 N/A N/A N/A 0.050±0.03 0.035±0.02 N/A 0.159±0.00 N/A 0.550±0.00 N/A N/A
ENSMUST00000106592 N/A 0.093±0.05 0.009±0.00 1.670±1.84 N/A N/A 0.038±0.00 N/A N/A 0.070±0.03 N/A 0.116±0.07 0.015±0.01 1.743±0.00
ENSMUST00000136433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142460 N/A 0.126±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.241±0.01 N/A N/A
ENSMUST00000148038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154123 N/A 0.095±0.00 0.022±0.01 N/A N/A N/A 0.066±0.00 N/A N/A 0.118±0.00 N/A 0.318±0.11 0.066±0.01 N/A
ENSMUSG00000081068 ENSMUST00000121030 N/A N/A 0.016±0.00 0.034±0.00 N/A N/A N/A N/A 0.045±0.00 N/A N/A 0.030±0.00 0.075±0.04 0.132±0.12
ENSMUSG00000082686 ENSMUST00000120507 0.128±0.04 N/A 0.073±0.00 0.148±0.06 0.516±0.25 N/A 0.210±0.12 0.216±0.12 0.085±0.09 0.408±0.20 N/A 0.173±0.15 0.059±0.04 0.787±0.40
ENSMUSG00000083904 ENSMUST00000117305 N/A N/A N/A 0.027±0.03 N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 0.063±0.02
ENSMUSG00000084673 ENSMUST00000122724 N/A N/A N/A 11.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100139 ENSMUST00000073495 N/A N/A N/A 0.015±0.00 0.124±0.03 0.102±0.02 0.036±0.02 0.055±0.04 0.043±0.00 0.247±0.02 0.026±0.02 0.127±0.11 0.057±0.03 0.052±0.00
ENSMUSG00000100514 ENSMUST00000120017 0.598±0.33 N/A 0.165±0.08 0.578±0.62 0.742±0.35 0.192±0.12 0.276±0.16 0.444±0.28 0.723±1.33 0.690±0.46 0.026±0.02 0.451±0.55 0.147±0.09 1.070±0.55

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