C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008V3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs358 VISTA 9606 15:67072826-67673347
GeneTranscriptPositionBiotype
ENSG00000103591 (AAGAB)
alpha- and gamma-adaptin binding protein 		ENST00000261880 (AAGAB-001) 67201033-67254736 protein_coding
ENST00000538028 (AAGAB-004) 67201673-67221202 processed_transcript
ENST00000542650 (AAGAB-002) 67202740-67255195 protein_coding
ENST00000558725 (AAGAB-006) 67226699-67254654 processed_transcript
ENST00000560362 (AAGAB-005) 67231848-67242871 protein_coding
ENST00000561229 (AAGAB-007) 67236718-67254654 processed_transcript
ENST00000561452 (AAGAB-003) 67201707-67254675 protein_coding
ENSG00000103599 (IQCH)
IQ motif containing H 		ENST00000335894 (IQCH-002) 67254831-67501804 protein_coding
ENST00000358767 (IQCH-201) 67254800-67501803 protein_coding
ENST00000512104 (IQCH-003) 67254800-67307224 protein_coding
ENST00000514049 (IQCH-001) 67254801-67501804 nonsense_mediated_decay
ENST00000535744 (IQCH-004) 67254848-67372170 nonsense_mediated_decay
ENST00000546225 (IQCH-202) 67254800-67501803 protein_coding
ENST00000558759 (IQCH-011) 67490015-67502260 protein_coding
ENST00000559172 (IQCH-008) 67357345-67360095 retained_intron
ENST00000559568 (IQCH-005) 67254848-67374168 nonsense_mediated_decay
ENST00000560497 (IQCH-009) 67255037-67279451 processed_transcript
ENST00000560790 (IQCH-007) 67279482-67282240 processed_transcript
ENST00000561339 (IQCH-010) 67261302-67372444 nonsense_mediated_decay
ENST00000561357 (IQCH-006) 67372520-67400226 protein_coding
ENSG00000137764 (MAP2K5)
mitogen-activated protein kinase kinase 5 		ENST00000178640 (MAP2K5-001) 67542709-67807123 protein_coding
ENST00000340972 (MAP2K5-002) 67640553-67807113 protein_coding
ENST00000354498 (MAP2K5-005) 67548998-67807111 protein_coding
ENST00000395476 (MAP2K5-013) 67543331-67807117 protein_coding
ENST00000439036 (MAP2K5-003) 67563300-67641489 protein_coding
ENST00000557869 (MAP2K5-009) 67703358-67769929 protein_coding
ENST00000558021 (MAP2K5-008) 67748368-67769905 retained_intron
ENST00000558274 (MAP2K5-010) 67717997-67806732 processed_transcript
ENST00000558392 (MAP2K5-007) 67585742-67807083 retained_intron
ENST00000559262 (MAP2K5-006) 67585890-67679956 protein_coding
ENST00000560086 (MAP2K5-012) 67546153-67550075 processed_transcript
ENST00000560591 (MAP2K5-004) 67543263-67659356 processed_transcript
ENSG00000166949 (SMAD3)
SMAD family member 3 		ENST00000327367 (SMAD3-001) 67065845-67195195 protein_coding
ENST00000439724 (SMAD3-003) 67138001-67190894 protein_coding
ENST00000537194 (SMAD3-004) 67166019-67190762 protein_coding
ENST00000540846 (SMAD3-002) 67125716-67190762 protein_coding
ENST00000558428 (SMAD3-009) 67166531-67181420 protein_coding
ENST00000558739 (SMAD3-014) 67138235-67165356 protein_coding
ENST00000558763 (SMAD3-006) 67186662-67191521 retained_intron
ENST00000558827 (SMAD3-008) 67166531-67184778 protein_coding
ENST00000558894 (SMAD3-013) 67128103-67187447 protein_coding
ENST00000559092 (SMAD3-015) 67098582-67165035 protein_coding
ENST00000559460 (SMAD3-012) 67063763-67166838 protein_coding
ENST00000559937 (SMAD3-010) 67077986-67170675 retained_intron
ENST00000560175 (SMAD3-016) 67098679-67170604 protein_coding
ENST00000560402 (SMAD3-011) 67174303-67193180 retained_intron
ENST00000560424 (SMAD3-007) 67184775-67190841 protein_coding
ENSG00000189227 (C15orf61)
chromosome 15 open reading frame 61 		ENST00000342683 (C15orf61-001) 67521068-67530143 protein_coding
ENST00000557807 (C15orf61-003) 67521695-67526638 protein_coding
ENST00000560041 (C15orf61-002) 67521685-67526641 processed_transcript
ENST00000560547 (C15orf61-004) 67521785-67526541 processed_transcript
ENSG00000242634 (RPS24P16)
ribosomal protein S24 pseudogene 16 		ENST00000497294 (RPS24P16-001) 67232446-67232837 processed_pseudogene
ENSG00000259202 (RP11-342M21.2)
 ENST00000558463 (RP11-342M21.2-001) 67142734-67146939 antisense
ENSG00000259512 (HNRNPA1P5)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 5 		ENST00000558213 (HNRNPA1P5-001) 67627852-67629135 processed_pseudogene
ENSG00000270964 (RP11-502I4.3)
 ENST00000604760 (RP11-502I4.3-001) 67541072-67542604 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008V3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs358 VISTA 10090 9:63223990-63824533
GeneTranscriptPositionBiotype
ENSMUSG00000032402 (Smad3)
SMAD family member 3 		ENSMUST00000034973 (Smad3-001) 63646767-63757994 protein_coding
ENSMUST00000133108 (Smad3-004) 63666148-63751077 protein_coding
ENSMUST00000137065 (Smad3-003) 63667813-63743265 processed_transcript
ENSMUST00000137713 (Smad3-005) 63654771-63666547 protein_coding
ENSMUST00000154323 (Smad3-002) 63654799-63711969 protein_coding
ENSMUSG00000032403 (2300009A05Rik)
RIKEN cDNA 2300009A05 gene 		ENSMUST00000168665 (2300009A05Rik-001) 63394447-63399241 protein_coding
ENSMUST00000185528 (2300009A05Rik-002) 63397476-63399246 retained_intron
ENSMUST00000186165 (2300009A05Rik-003) 63394447-63398827 processed_transcript
ENSMUST00000187234 (2300009A05Rik-004) 63394448-63398827 processed_transcript
ENSMUSG00000037257 (Aagab)
alpha- and gamma-adaptin binding protein 		ENSMUST00000041551 (Aagab-201) 63602655-63641889 protein_coding
ENSMUSG00000037801 (Iqch)
IQ motif containing H 		ENSMUST00000042322 (Iqch-001) 63421455-63602493 protein_coding
ENSMUST00000080527 (Iqch-003) 63421662-63602483 protein_coding
ENSMUST00000163624 (Iqch-005) 63421620-63602448 protein_coding
ENSMUST00000163982 (Iqch-004) 63421620-63602448 protein_coding
ENSMUST00000170960 (Iqch-002) 63585088-63602485 retained_intron
ENSMUST00000171243 (Iqch-006) 63421835-63602417 protein_coding
ENSMUSG00000058444 (Map2k5)
mitogen-activated protein kinase kinase 5 		ENSMUST00000034920 (Map2k5-201) 63163769-63377902 protein_coding
ENSMUSG00000091866 (Gm6257)
predicted gene 6257 		ENSMUST00000163864 (Gm6257-001) 63443166-63444075 processed_pseudogene
ENSMUSG00000093137 (Gm25995)
predicted gene, 25995 		ENSMUST00000175396 (Gm25995-201) 63442319-63442460 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008V3_0001ENSG00000103591ENST00000261880ENST00000538028ENST00000542650ENST00000561452ENSG00000103599ENST00000335894ENSG00000137764ENST00000178640ENST00000354498ENST00000395476ENST00000439036ENST00000558392ENST00000559262ENST00000560591ENSG00000166949ENST00000327367ENST00000439724ENSG00000189227ENST00000342683ENST00000560041ENSG00000242634ENST00000497294ENSG00000259202ENST00000558463ENSG00000259512ENST00000558213ENSG00000270964ENST00000604760CIL_0008V3_0002ENSMUSG00000032402ENSMUST00000034973ENSMUST00000154323ENSMUSG00000032403ENSMUST00000168665ENSMUST00000185528ENSMUSG00000037257ENSMUST00000041551ENSMUSG00000037801ENSMUST00000042322ENSMUST00000163982ENSMUST00000171243ENSMUSG00000058444ENSMUST00000034920ENSMUSG00000091866ENSMUST00000163864ENSMUSG00000093137ENSMUST00000175396
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103591 ENST00000261880 1.572±0.00 N/A 2.544±0.00 5.961±0.59 N/A 2.974±0.00 1.400±0.00 3.253±2.32 1.978±0.46 4.185±0.00 N/A 9.621±4.15 4.997±1.92 13.700±5.99
ENST00000538028 N/A 3.390±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542650 N/A N/A 3.831±0.00 7.525±0.00 8.555±0.00 N/A 2.110±0.00 2.566±0.00 3.533±0.00 4.135±0.00 4.029±0.00 9.847±0.00 N/A N/A
ENST00000558725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561452 6.089±0.00 6.825±0.00 N/A 9.173±0.00 8.235±0.00 4.918±1.26 4.048±0.00 12.676±0.00 4.554±0.00 6.461±4.99 8.887±0.00 10.119±2.90 7.951±0.46 11.250±1.08
ENSG00000103599 ENST00000335894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.034±0.77
ENST00000358767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137764 ENST00000178640 8.399±0.00 2.934±0.00 0.596±0.00 4.729±3.14 2.777±2.04 5.169±3.96 3.106±2.92 5.845±0.00 1.930±0.00 4.237±0.00 7.542±0.00 7.902±0.85 5.983±0.69 8.279±1.19
ENST00000340972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000354498 N/A N/A N/A 0.660±0.00 N/A 3.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395476 N/A 1.753±0.00 N/A N/A 2.359±0.00 N/A N/A 0.760±0.58 1.044±0.00 1.526±0.00 1.789±0.00 1.332±0.74 3.692±1.81 N/A
ENST00000439036 N/A N/A N/A N/A N/A N/A N/A N/A 3.822±0.00 N/A 3.492±0.00 10.739±0.00 13.931±0.00 5.881±0.00
ENST00000557869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558392 N/A N/A N/A 1.767±0.00 N/A N/A N/A N/A N/A N/A N/A 1.562±0.00 N/A 3.511±0.00
ENST00000559262 N/A N/A N/A N/A N/A N/A N/A 0.612±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560591 N/A N/A 0.606±0.00 N/A N/A N/A N/A N/A 1.428±0.00 1.227±0.00 N/A 0.639±0.00 N/A N/A
ENSG00000166949 ENST00000327367 14.384±0.00 7.527±0.00 2.526±0.00 2.352±0.86 4.456±3.42 4.570±3.40 1.749±0.76 3.454±1.73 2.368±0.92 6.815±5.60 5.972±1.49 8.354±3.92 6.992±0.78 2.849±1.23
ENST00000439724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.159±0.00 N/A 4.341±1.08 N/A
ENST00000537194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189227 ENST00000342683 0.840±0.00 N/A N/A N/A N/A 0.833±0.00 0.505±0.25 N/A 0.537±0.00 N/A 1.238±0.68 N/A N/A N/A
ENST00000557807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560041 N/A N/A N/A N/A N/A N/A 6.061±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242634 ENST00000497294 N/A 0.164±0.00 1.408±0.00 0.032±0.00 N/A N/A N/A 0.065±0.00 N/A N/A 0.057±0.00 0.059±0.02 0.045±0.00 N/A
ENSG00000259202 ENST00000558463 N/A 0.266±0.00 0.895±0.00 N/A N/A 0.436±0.00 N/A 2.014±0.00 N/A N/A N/A 0.103±0.00 N/A 0.257±0.05
ENSG00000259512 ENST00000558213 0.028±0.00 0.100±0.00 0.309±0.00 0.074±0.00 0.014±0.00 0.089±0.08 0.045±0.02 N/A 0.082±0.00 0.165±0.00 0.013±0.00 0.378±0.02 0.081±0.00 0.158±0.15
ENSG00000270964 ENST00000604760 0.596±0.00 0.822±0.00 0.359±0.00 0.171±0.03 0.381±0.08 0.229±0.04 0.290±0.15 0.372±0.23 0.185±0.00 0.042±0.01 0.119±0.00 0.390±0.07 0.157±0.10 0.393±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032402 ENSMUST00000034973 9.600±4.10 8.811±1.69 13.736±2.27 7.078±1.49 8.209±3.41 13.342±0.77 2.467±0.78 8.775±1.59 2.714±0.54 11.864±0.90 2.564±0.52 19.689±8.08 4.385±2.44 1.186±0.46
ENSMUST00000133108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154323 N/A N/A N/A N/A N/A N/A N/A N/A 2.062±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000032403 ENSMUST00000168665 N/A N/A 3.238±0.25 N/A 1.280±0.00 N/A 3.081±0.65 4.299±0.00 2.140±0.47 N/A 7.051±1.83 10.944±0.00 3.875±2.36 N/A
ENSMUST00000185528 N/A N/A 0.624±0.06 0.710±0.00 0.244±0.00 N/A N/A N/A 0.503±0.04 N/A 0.577±0.09 1.355±0.14 0.596±0.22 N/A
ENSMUST00000186165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037257 ENSMUST00000041551 11.532±2.35 16.284±1.75 13.246±2.02 16.722±0.98 12.305±1.52 20.188±1.45 6.121±0.38 14.535±1.77 11.152±3.13 9.514±0.91 6.179±0.28 21.810±2.25 10.453±1.86 7.442±2.15
ENSMUSG00000037801 ENSMUST00000042322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.317±4.32
ENSMUST00000080527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.007±0.00
ENSMUST00000170960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A 24.661±0.00
ENSMUSG00000058444 ENSMUST00000034920 13.247±0.37 33.349±4.21 9.187±0.70 18.543±2.02 19.498±9.15 12.960±3.51 7.596±2.15 11.966±1.05 8.125±3.19 15.259±4.36 5.711±0.36 24.913±7.85 16.295±8.12 16.051±4.91
ENSMUSG00000091866 ENSMUST00000163864 0.174±0.02 N/A 0.061±0.00 0.743±0.00 0.117±0.03 N/A 0.053±0.00 0.084±0.03 0.052±0.05 0.163±0.07 N/A 0.248±0.18 0.797±0.89 1.428±0.76
ENSMUSG00000093137 ENSMUST00000175396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.257±0.00

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