C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008YL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs908 VISTA 9606 8:98116253-98717204
GeneTranscriptPositionBiotype
ENSG00000104356 (POP1)
processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) 		ENST00000349693 (POP1-002) 98117840-98158412 protein_coding
ENST00000401707 (POP1-001) 98117312-98159834 protein_coding
ENST00000517435 (POP1-003) 98155958-98157667 retained_intron
ENST00000522319 (POP1-004) 98117297-98130040 protein_coding
ENSG00000104361 (NIPAL2)
NIPA-like domain containing 2 		ENST00000341166 (NIPAL2-001) 98189833-98294393 protein_coding
ENST00000430223 (NIPAL2-002) 98189833-98294336 protein_coding
ENST00000519324 (NIPAL2-005) 98252197-98294110 retained_intron
ENST00000520545 (NIPAL2-004) 98192758-98251754 processed_transcript
ENST00000520735 (NIPAL2-008) 98217203-98252601 processed_transcript
ENST00000521820 (NIPAL2-003) 98195691-98205176 retained_intron
ENST00000521949 (NIPAL2-006) 98231781-98236231 processed_transcript
ENST00000522188 (NIPAL2-007) 98217025-98254068 processed_transcript
ENSG00000104375 (STK3)
serine/threonine kinase 3 		ENST00000419617 (STK3-001) 98454633-98825681 protein_coding
ENST00000424861 (STK3-004) 98595330-98825666 nonsense_mediated_decay
ENST00000517832 (STK3-014) 98401403-98526926 processed_transcript
ENST00000518165 (STK3-005) 98548091-98825671 protein_coding
ENST00000518582 (STK3-012) 98547960-98651724 processed_transcript
ENST00000518627 (STK3-010) 98553330-98601661 processed_transcript
ENST00000519420 (STK3-016) 98883754-98942827 protein_coding
ENST00000520053 (STK3-008) 98579759-98596392 retained_intron
ENST00000520440 (STK3-013) 98526415-98548162 retained_intron
ENST00000520653 (STK3-007) 98594973-98602276 processed_transcript
ENST00000521649 (STK3-006) 98579696-98825646 nonsense_mediated_decay
ENST00000521768 (STK3-017) 98594877-98602182 processed_transcript
ENST00000522924 (STK3-009) 98579670-98595250 processed_transcript
ENST00000523159 (STK3-011) 98547966-98602255 processed_transcript
ENST00000523567 (STK3-015) 98875257-98883795 processed_transcript
ENST00000523601 (STK3-002) 98454695-98942571 protein_coding
ENST00000523960 (STK3-003) 98878898-98942645 retained_intron
ENST00000617590 (STK3-201) 98454631-98825671 protein_coding
ENSG00000132541 (HRSP12)
heat-responsive protein 12 		ENST00000254878 (HRSP12-001) 98102344-98117241 protein_coding
ENST00000519155 (HRSP12-002) 98113638-98117114 processed_transcript
ENST00000519608 (HRSP12-004) 98102619-98106631 retained_intron
ENST00000520507 (HRSP12-007) 98102439-98117110 protein_coding
ENST00000521560 (HRSP12-003) 98102464-98117171 protein_coding
ENST00000522791 (HRSP12-005) 98102397-98117159 nonsense_mediated_decay
ENSG00000156486 (KCNS2)
potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2 		ENST00000287042 (KCNS2-001) 98427022-98432848 protein_coding
ENST00000521839 (KCNS2-003) 98427531-98432148 protein_coding
ENSG00000207378 (RNU6-748P)
RNA, U6 small nuclear 748, pseudogene 		ENST00000384648 (RNU6-748P-201) 98462944-98463050 snRNA
ENSG00000253468 (KB-1517D11.2)
 ENST00000518956 (KB-1517D11.2-001) 98412882-98413784 processed_pseudogene
ENSG00000253911 (KB-1205A7.2)
 ENST00000517397 (KB-1205A7.2-001) 98603253-98606340 antisense
ENSG00000254112 (KB-1205A7.1)
 ENST00000520175 (KB-1205A7.1-001) 98633547-98633865 processed_pseudogene
ENSG00000254267 (KB-1458E12.1)
 ENST00000518704 (KB-1458E12.1-001) 98371355-98388247 lincRNA
ENSG00000272321 (KB-1517D11.4)
 ENST00000605923 (KB-1517D11.4-001) 98436669-98439290 antisense
ENSG00000278914 (KB-1517D11.3)
 ENST00000623465 (KB-1517D11.3-001) 98391401-98391514 TEC
CIL_0008YL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs908 VISTA 10090 15:34528818-35129716
GeneTranscriptPositionBiotype
ENSMUSG00000022325 (Pop1)
processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) 		ENSMUST00000052290 (Pop1-001) 34495304-34530648 protein_coding
ENSMUST00000079028 (Pop1-002) 34495323-34530637 protein_coding
ENSMUST00000126223 (Pop1-003) 34509907-34512192 retained_intron
ENSMUST00000132427 (Pop1-005) 34515790-34529161 retained_intron
ENSMUST00000153061 (Pop1-006) 34526145-34529231 retained_intron
ENSMUST00000155073 (Pop1-004) 34514170-34518018 processed_transcript
ENSMUSG00000022329 (Stk3)
serine/threonine kinase 3 		ENSMUST00000018476 (Stk3-001) 34875496-35155806 protein_coding
ENSMUST00000067033 (Stk3-002) 34875673-35155750 protein_coding
ENSMUST00000128425 (Stk3-004) 34958564-34999922 retained_intron
ENSMUST00000138841 (Stk3-003) 35072479-35155669 nonsense_mediated_decay
ENSMUSG00000038879 (Nipal2)
NIPA-like domain containing 2 		ENSMUST00000040791 (Nipal2-201) 34572799-34678706 protein_coding
ENSMUSG00000050963 (Kcns2)
K+ voltage-gated channel, subfamily S, 2 		ENSMUST00000072868 (Kcns2-201) 34837381-34842337 protein_coding
ENSMUSG00000084607 (Gm22208)
predicted gene, 22208 		ENSMUST00000122658 (Gm22208-201) 34531714-34531823 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008YL_0001ENSG00000104356ENST00000349693ENST00000401707ENST00000517435ENST00000522319ENSG00000104361ENST00000341166ENST00000430223ENST00000519324ENST00000520545ENST00000520735ENSG00000104375ENST00000419617ENST00000424861ENST00000518582ENSG00000132541ENST00000254878ENST00000520507ENST00000521560ENST00000522791ENSG00000156486ENST00000287042ENST00000521839ENSG00000207378ENST00000384648ENSG00000253468ENST00000518956ENSG00000253911ENST00000517397ENSG00000254112ENST00000520175ENSG00000254267ENST00000518704ENSG00000272321ENST00000605923ENSG00000278914ENST00000623465CIL_0008YL_0002ENSMUSG00000022325ENSMUST00000052290ENSMUST00000079028ENSMUST00000132427ENSMUST00000153061ENSMUSG00000022329ENSMUST00000018476ENSMUST00000067033ENSMUST00000128425ENSMUST00000138841ENSMUSG00000038879ENSMUST00000040791ENSMUSG00000050963ENSMUST00000072868ENSMUSG00000084607ENSMUST00000122658
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104356 ENST00000349693 0.350±0.00 0.842±0.00 0.487±0.00 N/A N/A 0.319±0.10 0.113±0.00 1.566±0.00 0.679±0.10 0.386±0.04 0.180±0.00 0.635±0.19 0.475±0.08 0.812±0.22
ENST00000401707 N/A 0.176±0.00 N/A 0.567±0.00 0.566±0.00 0.172±0.00 N/A N/A 0.116±0.00 N/A N/A 0.465±0.26 N/A 1.073±0.45
ENST00000517435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.219±0.00 N/A N/A N/A
ENST00000522319 N/A N/A 1.766±0.00 N/A N/A N/A 0.359±0.00 N/A N/A 0.895±0.00 N/A N/A N/A N/A
ENSG00000104361 ENST00000341166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.435±0.00 N/A
ENST00000430223 2.352±0.00 2.211±0.00 0.220±0.00 1.431±0.11 2.211±0.67 1.726±0.02 0.934±0.78 1.111±0.60 1.017±0.05 2.222±0.00 0.149±0.00 3.421±1.66 2.367±0.78 3.154±0.76
ENST00000519324 N/A N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A N/A N/A N/A N/A
ENST00000520545 N/A N/A 0.834±0.00 N/A N/A N/A N/A N/A N/A 1.373±0.00 N/A 1.774±0.00 N/A N/A
ENST00000520735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A N/A
ENST00000521820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000104375 ENST00000419617 5.879±0.00 4.318±0.00 2.975±0.00 1.243±0.24 4.515±0.28 4.854±2.68 2.382±0.73 6.275±3.60 5.086±3.07 6.856±0.19 1.559±0.94 8.391±3.30 8.096±1.45 5.879±0.72
ENST00000424861 N/A N/A N/A N/A 1.820±0.00 0.887±0.00 N/A N/A N/A 3.348±0.00 N/A 3.323±0.00 N/A N/A
ENST00000517832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518582 N/A N/A N/A N/A N/A N/A 3.004±0.00 N/A N/A N/A N/A 18.457±0.00 25.163±0.00 32.845±0.00
ENST00000518627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000132541 ENST00000254878 10.008±0.00 2.267±0.00 15.719±0.00 11.650±0.78 4.566±1.59 3.237±1.50 5.096±2.10 86.595±48.92 73.076±71.33 3.355±0.38 2.757±1.77 8.210±3.95 3.284±1.35 7.638±0.75
ENST00000519155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520507 N/A N/A N/A N/A N/A 1.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521560 N/A N/A N/A N/A 3.635±0.00 N/A 2.220±0.00 15.353±0.00 49.660±0.00 N/A 0.323±0.00 N/A N/A N/A
ENST00000522791 4.009±0.00 0.747±0.00 N/A 12.701±0.00 4.288±0.00 3.926±0.00 N/A 11.038±0.00 N/A N/A N/A N/A N/A 6.590±0.00
ENSG00000156486 ENST00000287042 N/A N/A N/A 0.816±0.37 0.013±0.00 N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A
ENST00000521839 N/A N/A 0.101±0.00 N/A 0.108±0.10 0.237±0.12 0.037±0.02 0.094±0.00 0.096±0.09 0.070±0.00 0.014±0.00 0.319±0.16 0.566±0.46 0.030±0.00
ENSG00000207378 ENST00000384648 N/A N/A N/A N/A N/A N/A N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000253468 ENST00000518956 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A
ENSG00000253911 ENST00000517397 0.352±0.00 0.205±0.00 N/A N/A N/A N/A 0.182±0.00 N/A 0.129±0.00 N/A N/A N/A N/A 0.187±0.05
ENSG00000254112 ENST00000520175 0.040±0.00 N/A 0.984±0.00 N/A 2.211±0.00 N/A 1.053±0.00 0.308±0.27 6.964±0.00 3.060±0.00 5.470±0.00 1.317±1.57 0.159±0.00 0.081±0.00
ENSG00000254267 ENST00000518704 N/A 0.102±0.00 N/A N/A N/A N/A N/A 0.271±0.00 0.030±0.00 N/A N/A 0.181±0.00 0.126±0.00 0.300±0.04
ENSG00000272321 ENST00000605923 N/A N/A N/A 1.831±0.37 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278914 ENST00000623465 N/A N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A N/A N/A N/A 0.275±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022325 ENSMUST00000052290 N/A N/A N/A 0.222±0.00 0.418±0.00 N/A 0.135±0.07 N/A 0.283±0.00 0.160±0.00 0.241±0.09 N/A 0.469±0.00 N/A
ENSMUST00000079028 0.940±0.28 0.393±0.08 1.148±0.05 2.502±1.56 0.546±0.22 0.644±0.23 0.446±0.07 0.807±0.36 3.261±2.42 0.538±0.11 0.867±0.12 1.826±1.03 3.348±1.99 0.676±0.16
ENSMUST00000126223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.857±0.00 N/A N/A 0.593±0.00
ENSMUST00000153061 2.355±0.02 0.828±0.00 N/A N/A N/A N/A 0.821±0.00 N/A N/A N/A N/A 3.318±1.02 N/A N/A
ENSMUST00000155073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022329 ENSMUST00000018476 1.921±0.99 0.623±0.18 3.413±1.31 1.305±0.25 1.068±0.14 0.964±0.32 0.501±0.16 1.254±0.37 2.803±2.03 2.333±0.31 0.846±0.20 3.609±3.53 5.774±1.19 0.599±0.19
ENSMUST00000067033 0.584±0.34 0.616±0.00 1.536±0.00 1.922±1.52 0.483±0.19 0.273±0.14 0.729±0.07 0.753±0.19 1.021±0.73 1.084±0.00 0.191±0.05 3.347±3.94 3.130±2.39 1.161±1.06
ENSMUST00000128425 N/A N/A N/A N/A N/A 1.548±0.00 N/A N/A N/A N/A N/A 2.377±1.39 N/A 4.653±0.00
ENSMUST00000138841 N/A N/A N/A 4.007±0.00 N/A N/A N/A N/A 0.553±0.00 N/A N/A 2.039±0.00 N/A N/A
ENSMUSG00000038879 ENSMUST00000040791 0.761±0.62 1.965±0.64 3.135±1.14 1.109±0.19 2.972±1.08 6.383±0.24 0.140±0.03 1.290±0.24 0.104±0.05 5.994±0.72 0.040±0.01 1.597±0.66 0.269±0.14 0.270±0.15
ENSMUSG00000050963 ENSMUST00000072868 0.009±0.00 0.013±0.00 0.003±0.00 0.659±0.53 0.023±0.00 0.031±0.01 N/A N/A 0.002±0.00 0.009±0.00 N/A 0.509±0.19 0.002±0.00 0.035±0.02
ENSMUSG00000084607 ENSMUST00000122658 3920.490±0.00 N/A N/A N/A 2774.520±0.00 N/A N/A 4896.420±2449.70 27.324±3.07 2466.680±0.00 N/A 29.463±0.00 N/A N/A

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