C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008YM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs905 VISTA 9606 4:144347096-144948803
GeneTranscriptPositionBiotype
ENSG00000164161 (HHIP)
hedgehog interacting protein 		ENST00000296575 (HHIP-001) 144646021-144745271 protein_coding
ENST00000434550 (HHIP-002) 144646172-144660273 protein_coding
ENST00000503090 (HHIP-005) 144734867-144738893 processed_transcript
ENST00000505891 (HHIP-008) 144647099-144659776 processed_transcript
ENST00000509630 (HHIP-004) 144652659-144685665 processed_transcript
ENST00000511314 (HHIP-003) 144648180-144659856 processed_transcript
ENST00000512791 (HHIP-006) 144708131-144715623 retained_intron
ENST00000515080 (HHIP-007) 144650615-144658839 processed_transcript
ENSG00000248890 (HHIP-AS1)
HHIP antisense RNA 1 		ENST00000503066 (HHIP-AS1-003) 144643224-144645912 antisense
ENST00000508269 (HHIP-AS1-002) 144642922-144645987 antisense
ENST00000512359 (HHIP-AS1-001) 144643372-144661357 antisense
ENSG00000249193 (HSPD1P5)
heat shock 60kDa protein 1 (chaperonin) pseudogene 5 		ENST00000511127 (HSPD1P5-001) 144845625-144847344 processed_pseudogene
ENSG00000250406 (RP13-539F13.3)
 ENST00000512833 (RP13-539F13.3-001) 144851572-144874787 lincRNA
ENSG00000250504 (KRT18P51)
keratin 18 pseudogene 51 		ENST00000504966 (KRT18P51-001) 144572238-144572983 processed_pseudogene
ENSG00000251452 (RP13-539F13.2)
 ENST00000509609 (RP13-539F13.2-001) 144920713-144921164 processed_pseudogene
ENSG00000261129 (RP11-361D14.2)
 ENST00000568324 (RP11-361D14.2-001) 144505900-144509001 lincRNA
CIL_0008YM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs905 VISTA 10090 8:79755435-80357135
GeneTranscriptPositionBiotype
ENSMUSG00000036977 (Anapc10)
anaphase promoting complex subunit 10 		ENSMUST00000048147 (Anapc10-201) 79711820-79777321 protein_coding
ENSMUSG00000064325 (Hhip)
Hedgehog-interacting protein 		ENSMUST00000079038 (Hhip-001) 79970345-80058006 protein_coding
ENSMUST00000155850 (Hhip-002) 79966115-79990349 processed_transcript
ENSMUSG00000082491 (Gm5909)
predicted gene 5909 		ENSMUST00000119768 (Gm5909-001) 80110806-80112086 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008YM_0001ENSG00000164161ENST00000296575ENST00000434550ENST00000503090ENST00000505891ENST00000509630ENST00000511314ENST00000512791ENST00000515080ENSG00000248890ENST00000503066ENST00000508269ENST00000512359ENSG00000249193ENST00000511127ENSG00000250406ENST00000512833ENSG00000250504ENST00000504966ENSG00000251452ENST00000509609ENSG00000261129ENST00000568324CIL_0008YM_0002ENSMUSG00000036977ENSMUST00000048147ENSMUSG00000064325ENSMUST00000079038ENSMUST00000155850ENSMUSG00000082491ENSMUST00000119768
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008YM_0001ENSG00000164161ENST00000296575ENST00000434550ENST00000509630ENST00000512791ENSG00000248890ENST00000503066ENST00000508269ENST00000512359ENSG00000249193ENST00000511127ENSG00000250406ENST00000512833ENSG00000250504ENST00000504966ENSG00000251452ENST00000509609ENSG00000261129ENST00000568324CIL_0008YM_0002ENSMUSG00000036977ENSMUST00000048147ENSMUSG00000064325ENSMUST00000079038ENSMUST00000155850ENSMUSG00000082491ENSMUST00000119768
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164161 ENST00000296575 0.051±0.00 0.065±0.00 0.405±0.00 3.394±0.58 0.794±0.46 1.446±0.96 0.059±0.00 1.585±1.14 0.875±0.26 3.840±2.11 0.056±0.00 0.141±0.05 0.018±0.01 1.859±1.37
ENST00000434550 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.992±0.90 N/A 0.426±0.00 N/A N/A
ENST00000503090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.203±0.00 0.073±0.00 N/A
ENST00000511314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.900±0.00 N/A N/A
ENST00000515080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248890 ENST00000503066 0.289±0.00 N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A 0.316±0.00 N/A N/A N/A
ENST00000508269 0.256±0.00 N/A N/A N/A N/A N/A 0.161±0.00 N/A N/A N/A 0.418±0.00 2.250±0.09 0.085±0.00 N/A
ENST00000512359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A
ENSG00000249193 ENST00000511127 N/A N/A 0.119±0.00 N/A 0.006±0.00 0.035±0.00 0.012±0.00 0.025±0.00 0.108±0.00 0.121±0.09 0.018±0.00 0.013±0.01 0.021±0.00 0.023±0.00
ENSG00000250406 ENST00000512833 N/A N/A 0.014±0.00 N/A 0.003±0.00 N/A 0.006±0.00 N/A N/A N/A N/A 0.008±0.00 0.028±0.01 0.355±0.08
ENSG00000250504 ENST00000504966 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A
ENSG00000251452 ENST00000509609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A
ENSG00000261129 ENST00000568324 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A 0.035±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036977 ENSMUST00000048147 1.067±0.13 0.481±0.21 1.846±0.32 2.680±1.40 0.896±0.51 0.824±0.30 0.316±0.18 0.629±0.25 1.297±0.97 0.932±0.38 0.403±0.21 0.948±0.51 2.568±1.34 2.073±1.39
ENSMUSG00000064325 ENSMUST00000079038 0.309±0.30 0.198±0.05 N/A 0.217±0.10 0.146±0.05 1.344±0.35 0.030±0.02 0.127±0.05 0.123±0.06 3.302±1.09 0.019±0.01 0.845±0.36 0.089±0.04 0.124±0.11
ENSMUST00000155850 0.116±0.04 N/A N/A 0.776±0.00 N/A N/A 0.039±0.00 N/A 0.275±0.06 N/A 0.074±0.02 3.291±0.00 0.326±0.10 0.208±0.01
ENSMUSG00000082491 ENSMUST00000119768 0.047±0.01 N/A N/A 0.749±0.21 0.105±0.00 0.130±0.00 0.041±0.00 0.060±0.02 0.088±0.10 N/A 0.045±0.01 0.107±0.13 0.072±0.07 0.424±0.43

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