C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008Z3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2309 VISTA 9606 7:95796967-96398368
GeneTranscriptPositionBiotype
ENSG00000004864 (SLC25A13)
solute carrier family 25 (aspartate/glutamate carrier), member 13 		ENST00000265631 (SLC25A13-001) 96120220-96322093 protein_coding
ENST00000416240 (SLC25A13-201) 96120221-96322147 protein_coding
ENST00000472162 (SLC25A13-005) 96193148-96322136 nonsense_mediated_decay
ENST00000484495 (SLC25A13-003) 96169868-96189379 processed_transcript
ENST00000487710 (SLC25A13-004) 96296898-96309684 processed_transcript
ENST00000490072 (SLC25A13-002) 96146554-96185011 processed_transcript
ENST00000492869 (SLC25A13-006) 96170044-96184574 processed_transcript
ENST00000494085 (SLC25A13-007) 96120956-96121998 processed_transcript
ENSG00000208025 (MIR591)
microRNA 591 		ENST00000385290 (MIR591-201) 96219662-96219756 miRNA
ENSG00000220987 (AC084368.1)
 ENST00000408060 (AC084368.1-201) 96306760-96306860 miRNA
ENSG00000237551 (AC096775.2)
 ENST00000437724 (AC096775.2-001) 96283357-96283804 processed_pseudogene
ENSG00000275834 (RP11-440E5.1)
 ENST00000620935 (RP11-440E5.1-001) 96306810-96306874 processed_pseudogene
ENSG00000279067 (GS1-25M2.1)
 ENST00000625023 (GS1-25M2.1-001) 96118647-96119995 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0008Z3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2309 VISTA 10090 6:5726899-6328252
GeneTranscriptPositionBiotype
ENSMUSG00000015112 (Slc25a13)
solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 		ENSMUST00000015256 (Slc25a13-001) 6041218-6217118 protein_coding
ENSMUST00000169197 (Slc25a13-002) 6041218-6191317 processed_transcript
ENSMUST00000177698 (Slc25a13-007) 6109181-6191317 processed_transcript
ENSMUST00000177805 (Slc25a13-008) 6041221-6191317 processed_transcript
ENSMUST00000179756 (Slc25a13-009) 6109181-6181069 processed_transcript
ENSMUST00000188130 (Slc25a13-201) 6041219-6217173 protein_coding
ENSMUST00000188414 (Slc25a13-202) 6041219-6217173 protein_coding
ENSMUST00000189611 (Slc25a13-203) 6041219-6217173 protein_coding
ENSMUSG00000029757 (Dync1i1)
dynein cytoplasmic 1 intermediate chain 1 		ENSMUST00000115554 (Dync1i1-004) 5725812-6028039 protein_coding
ENSMUST00000115555 (Dync1i1-002) 5725763-6028030 protein_coding
ENSMUST00000115556 (Dync1i1-001) 5725639-6028039 protein_coding
ENSMUST00000115559 (Dync1i1-003) 5725791-6028039 protein_coding
ENSMUST00000153942 (Dync1i1-005) 5725818-5767050 protein_coding
ENSMUSG00000085416 (1700019G24Rik)
RIKEN cDNA 1700019G24 gene 		ENSMUST00000130004 (1700019G24Rik-001) 5963909-5977393 antisense
ENSMUSG00000093482 (Gm20619)
predicted gene 20619 		ENSMUST00000175814 (Gm20619-002) 6248690-6378675 lincRNA
ENSMUST00000176283 (Gm20619-001) 6248687-6364097 lincRNA
ENSMUST00000181192 (Gm20619-004) 6248718-6281135 lincRNA
ENSMUST00000181343 (Gm20619-005) 6299421-6363892 lincRNA
ENSMUST00000181633 (Gm20619-003) 6248659-6281139 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Z3_0001ENSG00000004864ENST00000265631ENST00000416240ENST00000472162ENST00000484495ENST00000487710ENST00000490072ENST00000492869ENST00000494085ENSG00000208025ENST00000385290ENSG00000220987ENST00000408060ENSG00000237551ENST00000437724ENSG00000275834ENST00000620935ENSG00000279067ENST00000625023CIL_0008Z3_0002ENSMUSG00000015112ENSMUST00000015256ENSMUST00000169197ENSMUST00000177698ENSMUST00000177805ENSMUST00000179756ENSMUST00000188130ENSMUST00000188414ENSMUST00000189611ENSMUSG00000029757ENSMUST00000115554ENSMUST00000115555ENSMUST00000115556ENSMUST00000115559ENSMUST00000153942ENSMUSG00000085416ENSMUST00000130004ENSMUSG00000093482ENSMUST00000175814ENSMUST00000176283ENSMUST00000181192ENSMUST00000181343ENSMUST00000181633
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Z3_0001ENSG00000004864ENST00000265631ENST00000416240ENST00000472162ENSG00000208025ENST00000385290ENSG00000220987ENST00000408060ENSG00000237551ENST00000437724ENSG00000275834ENST00000620935ENSG00000279067ENST00000625023CIL_0008Z3_0002ENSMUSG00000015112ENSMUST00000015256ENSMUST00000169197ENSMUST00000177698ENSMUST00000177805ENSMUST00000179756ENSMUST00000188414ENSMUSG00000029757ENSMUST00000115554ENSMUST00000115555ENSMUST00000115556ENSMUST00000115559ENSMUSG00000085416ENSMUST00000130004ENSMUSG00000093482ENSMUST00000175814ENSMUST00000176283ENSMUST00000181192ENSMUST00000181343ENSMUST00000181633
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000004864 ENST00000265631 2.923±0.00 4.687±0.00 2.939±0.00 2.458±0.81 2.831±0.00 2.585±1.37 1.528±0.91 15.299±2.71 12.116±10.61 1.829±0.61 0.927±0.00 12.547±10.73 7.892±0.87 4.058±0.76
ENST00000416240 N/A N/A N/A N/A 0.809±0.00 N/A N/A N/A N/A N/A N/A 2.921±0.00 1.977±0.00 N/A
ENST00000472162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.322±0.00 11.479±0.00 5.239±0.00
ENST00000484495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000208025 ENST00000385290 N/A N/A N/A N/A 0.553±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000220987 ENST00000408060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 141.648±0.00 N/A N/A
ENSG00000237551 ENST00000437724 0.027±0.00 N/A N/A 0.027±0.00 0.114±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000275834 ENST00000620935 N/A N/A N/A N/A 1.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.537±0.00
ENSG00000279067 ENST00000625023 N/A 0.056±0.00 N/A 0.146±0.03 N/A 0.043±0.00 N/A N/A 0.019±0.01 N/A N/A N/A N/A 0.009±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015112 ENSMUST00000015256 0.874±0.73 1.821±0.68 1.226±0.02 1.069±0.05 0.888±0.26 2.147±1.17 20.504±2.51 19.532±5.92 31.364±17.33 1.295±0.00 0.179±0.06 3.926±2.62 8.991±5.59 0.949±0.35
ENSMUST00000169197 N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A N/A N/A 0.037±0.00 1.659±0.52 2.308±1.37 N/A
ENSMUST00000177698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 7.096±0.00 8.278±5.02 0.852±0.00
ENSMUST00000177805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A
ENSMUST00000179756 N/A N/A N/A 0.951±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188414 1.793±0.00 1.539±0.72 N/A 0.729±0.00 N/A 3.597±1.75 4.700±0.00 2.477±0.00 4.848±2.51 1.153±0.17 N/A 2.348±1.13 4.130±2.00 N/A
ENSMUST00000189611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029757 ENSMUST00000115554 0.491±0.55 0.677±0.37 0.100±0.00 1.205±0.26 0.134±0.02 1.122±0.31 0.149±0.02 0.465±0.08 0.030±0.03 0.101±0.00 0.042±0.01 6.334±4.10 0.160±0.09 3.093±1.08
ENSMUST00000115555 N/A 0.449±0.10 N/A N/A 0.078±0.00 0.643±0.33 N/A 0.347±0.00 N/A 0.057±0.00 N/A 3.663±1.69 N/A 0.854±0.39
ENSMUST00000115556 N/A 0.107±0.03 N/A 2.425±1.94 N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A
ENSMUST00000115559 N/A 0.341±0.17 N/A 14.272±14.74 N/A 0.559±0.02 N/A 0.274±0.12 N/A 0.129±0.00 N/A 5.605±2.11 N/A 0.495±0.00
ENSMUST00000153942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085416 ENSMUST00000130004 N/A N/A N/A 0.205±0.00 N/A N/A 0.086±0.00 0.154±0.05 N/A N/A 0.060±0.00 0.291±0.13 0.129±0.09 85.767±38.65
ENSMUSG00000093482 ENSMUST00000175814 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00
ENSMUST00000176283 N/A N/A 0.031±0.01 N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A 0.058±0.00 0.028±0.02 2.537±1.05
ENSMUST00000181192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.340±1.41
ENSMUST00000181343 N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 0.011±0.00 0.126±0.03 N/A N/A 0.053±0.00 N/A
ENSMUST00000181633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.107±0.00

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