C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008Z8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2300 VISTA 9606 6:84776801-85379105
GeneTranscriptPositionBiotype
ENSG00000213211 (KRT18P64)
keratin 18 pseudogene 64 		ENST00000434946 (KRT18P64-001) 85287789-85289007 processed_pseudogene
ENSG00000216902 (RP1-161C16.1)
 ENST00000403365 (RP1-161C16.1-001) 85257328-85257694 processed_pseudogene
ENSG00000217060 (RP11-30P6.1)
 ENST00000402742 (RP11-30P6.1-001) 85286076-85290849 unprocessed_pseudogene
CIL_0008Z8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2300 VISTA 10090 9:87730648-88334977
GeneTranscriptPositionBiotype
ENSMUSG00000032419 (Tbx18)
T-box18 		ENSMUST00000034991 (Tbx18-001) 87702800-87731260 protein_coding
ENSMUST00000186698 (Tbx18-002) 87724397-87730497 processed_transcript
ENSMUSG00000032420 (Nt5e)
5' nucleotidase, ecto 		ENSMUST00000034992 (Nt5e-001) 88327197-88372092 protein_coding
ENSMUST00000186789 (Nt5e-003) 88327618-88331219 retained_intron
ENSMUST00000187166 (Nt5e-002) 88327633-88367844 retained_intron
ENSMUSG00000099886 (RP23-338I1.3)
predicted gene 2324 		ENSMUST00000187464 (RP23-338I1.3-001) 88121295-88122765 processed_pseudogene
ENSMUSG00000100337 (RP23-118M23.7)
predicted gene 5066 		ENSMUST00000188479 (RP23-118M23.7-001) 88280369-88281190 processed_pseudogene
ENSMUSG00000100782 (RP23-118M23.4)
predicted gene 28231 		ENSMUST00000190118 (RP23-118M23.4-001) 88259895-88263035 lincRNA
ENSMUSG00000102075 (RP23-338I1.1)
predicted gene 5368 		ENSMUST00000189012 (RP23-338I1.1-001) 88145969-88146554 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Z8_0001ENSG00000213211ENST00000434946ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742CIL_0008Z8_0002ENSMUSG00000032419ENSMUST00000034991ENSMUST00000186698ENSMUSG00000032420ENSMUST00000034992ENSMUST00000186789ENSMUST00000187166ENSMUSG00000099886ENSMUST00000187464ENSMUSG00000100337ENSMUST00000188479ENSMUSG00000100782ENSMUST00000190118ENSMUSG00000102075ENSMUST00000189012
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Z8_0001ENSG00000213211ENST00000434946ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742CIL_0008Z8_0002ENSMUSG00000032419ENSMUST00000034991ENSMUSG00000032420ENSMUST00000034992ENSMUST00000186789ENSMUST00000187166ENSMUSG00000099886ENSMUST00000187464ENSMUSG00000100337ENSMUST00000188479ENSMUSG00000100782ENSMUST00000190118ENSMUSG00000102075ENSMUST00000189012
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213211 ENST00000434946 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A 0.073±0.06
ENSG00000216902 ENST00000403365 N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217060 ENST00000402742 N/A N/A N/A 0.014±0.00 0.007±0.00 N/A N/A N/A N/A N/A 0.006±0.00 0.016±0.00 N/A 0.025±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032419 ENSMUST00000034991 1.035±0.65 0.656±0.21 1.188±0.78 0.881±0.69 2.431±0.62 0.046±0.02 0.475±0.25 0.179±0.10 0.013±0.01 0.247±0.18 0.099±0.03 0.089±0.06 0.079±0.06 0.204±0.15
ENSMUST00000186698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032420 ENSMUST00000034992 1.153±0.75 1.301±0.55 17.068±2.11 0.749±0.18 2.911±0.47 12.141±3.84 3.581±0.60 10.411±2.02 11.110±5.23 16.769±0.59 0.475±0.10 1.632±0.53 12.625±7.78 2.510±0.84
ENSMUST00000186789 N/A 1.225±1.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187166 N/A 0.773±0.00 N/A N/A 0.878±0.09 6.639±2.41 0.584±0.00 N/A N/A N/A N/A 0.802±0.32 N/A N/A
ENSMUSG00000099886 ENSMUST00000187464 N/A N/A N/A 0.030±0.00 N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100337 ENSMUST00000188479 0.105±0.02 N/A 0.023±0.00 N/A N/A 0.243±0.09 0.132±0.02 0.084±0.00 0.044±0.00 0.096±0.00 N/A N/A 0.050±0.00 0.164±0.05
ENSMUSG00000100782 ENSMUST00000190118 0.016±0.00 N/A N/A N/A N/A 0.048±0.02 0.172±0.05 0.014±0.00 N/A 0.082±0.02 N/A 0.094±0.04 0.012±0.01 0.015±0.00
ENSMUSG00000102075 ENSMUST00000189012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A

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