C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008Z9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2301 VISTA 9606 6:84885897-85488288
GeneTranscriptPositionBiotype
ENSG00000135318 (NT5E)
5'-nucleotidase, ecto (CD73) 		ENST00000257770 (NT5E-001) 85450091-85495778 protein_coding
ENST00000369646 (NT5E-002) 85450091-85471599 protein_coding
ENST00000369651 (NT5E-201) 85449584-85495791 protein_coding
ENST00000416334 (NT5E-003) 85471381-85492161 protein_coding
ENST00000437581 (NT5E-004) 85485397-85491325 protein_coding
ENSG00000213211 (KRT18P64)
keratin 18 pseudogene 64 		ENST00000434946 (KRT18P64-001) 85287789-85289007 processed_pseudogene
ENSG00000214460 (TPT1P6)
tumor protein, translationally-controlled 1 pseudogene 6 		ENST00000458298 (TPT1P6-001) 85427453-85427966 processed_pseudogene
ENSG00000216902 (RP1-161C16.1)
 ENST00000403365 (RP1-161C16.1-001) 85257328-85257694 processed_pseudogene
ENSG00000217060 (RP11-30P6.1)
 ENST00000402742 (RP11-30P6.1-001) 85286076-85290849 unprocessed_pseudogene
ENSG00000234155 (RP11-30P6.6)
 ENST00000455071 (RP11-30P6.6-001) 85387219-85390186 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008Z9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2301 VISTA 10090 9:87836921-88439766
GeneTranscriptPositionBiotype
ENSMUSG00000032420 (Nt5e)
5' nucleotidase, ecto 		ENSMUST00000034992 (Nt5e-001) 88327197-88372092 protein_coding
ENSMUST00000186789 (Nt5e-003) 88327618-88331219 retained_intron
ENSMUST00000187166 (Nt5e-002) 88327633-88367844 retained_intron
ENSMUSG00000032422 (Snx14)
sorting nexin 14 		ENSMUST00000126405 (Snx14-003) 88381539-88438929 nonsense_mediated_decay
ENSMUST00000126563 (Snx14-004) 88419698-88438912 retained_intron
ENSMUST00000140439 (Snx14-002) 88376752-88398621 retained_intron
ENSMUST00000165315 (Snx14-001) 88376750-88438951 protein_coding
ENSMUST00000173011 (Snx14-007) 88376752-88438898 protein_coding
ENSMUST00000173039 (Snx14-005) 88376764-88438958 protein_coding
ENSMUST00000174806 (Snx14-006) 88376767-88438914 protein_coding
ENSMUST00000187610 (Snx14-008) 88392206-88394474 retained_intron
ENSMUSG00000099886 (RP23-338I1.3)
predicted gene 2324 		ENSMUST00000187464 (RP23-338I1.3-001) 88121295-88122765 processed_pseudogene
ENSMUSG00000100337 (RP23-118M23.7)
predicted gene 5066 		ENSMUST00000188479 (RP23-118M23.7-001) 88280369-88281190 processed_pseudogene
ENSMUSG00000100782 (RP23-118M23.4)
predicted gene 28231 		ENSMUST00000190118 (RP23-118M23.4-001) 88259895-88263035 lincRNA
ENSMUSG00000102075 (RP23-338I1.1)
predicted gene 5368 		ENSMUST00000189012 (RP23-338I1.1-001) 88145969-88146554 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Z9_0001ENSG00000135318ENST00000257770ENST00000369646ENST00000369651ENST00000416334ENST00000437581ENSG00000213211ENST00000434946ENSG00000214460ENST00000458298ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742ENSG00000234155ENST00000455071CIL_0008Z9_0002ENSMUSG00000032420ENSMUST00000034992ENSMUST00000186789ENSMUST00000187166ENSMUSG00000032422ENSMUST00000126405ENSMUST00000126563ENSMUST00000140439ENSMUST00000165315ENSMUST00000173011ENSMUST00000173039ENSMUST00000174806ENSMUST00000187610ENSMUSG00000099886ENSMUST00000187464ENSMUSG00000100337ENSMUST00000188479ENSMUSG00000100782ENSMUST00000190118ENSMUSG00000102075ENSMUST00000189012
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Z9_0001ENSG00000135318ENST00000257770ENST00000369646ENST00000369651ENST00000416334ENSG00000213211ENST00000434946ENSG00000214460ENST00000458298ENSG00000216902ENST00000403365ENSG00000217060ENST00000402742ENSG00000234155ENST00000455071CIL_0008Z9_0002ENSMUSG00000032420ENSMUST00000034992ENSMUST00000186789ENSMUST00000187166ENSMUSG00000032422ENSMUST00000126405ENSMUST00000126563ENSMUST00000165315ENSMUST00000173011ENSMUST00000173039ENSMUST00000174806ENSMUSG00000099886ENSMUST00000187464ENSMUSG00000100337ENSMUST00000188479ENSMUSG00000100782ENSMUST00000190118ENSMUSG00000102075ENSMUST00000189012
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135318 ENST00000257770 9.870±0.00 9.598±0.00 0.897±0.00 2.445±0.12 5.257±0.66 6.907±3.45 1.151±0.74 6.071±2.28 6.442±0.89 1.856±0.73 0.659±0.23 7.980±5.61 14.792±5.45 5.535±1.35
ENST00000369646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A
ENST00000369651 N/A N/A N/A N/A N/A 1.057±0.40 N/A N/A N/A 0.870±0.29 N/A N/A N/A 1.001±0.00
ENST00000416334 N/A N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000437581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213211 ENST00000434946 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A 0.073±0.06
ENSG00000214460 ENST00000458298 0.572±0.00 0.995±0.00 N/A 0.209±0.00 0.464±0.00 0.781±0.00 0.207±0.00 0.519±0.00 0.111±0.00 0.260±0.00 1.375±0.00 0.550±0.04 0.473±0.00 0.464±0.18
ENSG00000216902 ENST00000403365 N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217060 ENST00000402742 N/A N/A N/A 0.014±0.00 0.007±0.00 N/A N/A N/A N/A N/A 0.006±0.00 0.016±0.00 N/A 0.025±0.01
ENSG00000234155 ENST00000455071 N/A 0.013±0.00 0.851±0.00 0.017±0.00 0.059±0.06 0.716±0.41 0.064±0.00 2.279±1.89 0.822±0.00 N/A N/A 0.037±0.01 N/A 0.029±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032420 ENSMUST00000034992 1.153±0.75 1.301±0.55 17.068±2.11 0.749±0.18 2.911±0.47 12.141±3.84 3.581±0.60 10.411±2.02 11.110±5.23 16.769±0.59 0.475±0.10 1.632±0.53 12.625±7.78 2.510±0.84
ENSMUST00000186789 N/A 1.225±1.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187166 N/A 0.773±0.00 N/A N/A 0.878±0.09 6.639±2.41 0.584±0.00 N/A N/A N/A N/A 0.802±0.32 N/A N/A
ENSMUSG00000032422 ENSMUST00000126405 2.071±0.00 9.186±1.59 N/A N/A 2.211±0.00 3.367±0.00 3.202±0.40 N/A 1.823±0.09 6.354±0.00 N/A N/A N/A N/A
ENSMUST00000126563 N/A 53.641±11.69 N/A N/A 12.545±3.86 17.138±5.47 N/A 6.527±0.00 6.908±1.77 18.762±2.90 N/A 17.431±3.62 N/A N/A
ENSMUST00000140439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165315 4.312±1.51 N/A 16.537±0.86 N/A 3.167±0.36 5.175±0.00 3.791±0.90 4.667±1.35 6.151±2.30 7.453±1.94 N/A 9.893±5.25 12.758±2.25 8.320±1.45
ENSMUST00000173011 N/A N/A N/A N/A 3.487±0.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173039 N/A 8.337±2.50 N/A N/A 3.380±0.06 6.706±2.24 N/A 5.776±1.30 3.440±1.42 3.839±0.38 N/A 3.115±0.72 N/A 3.113±0.00
ENSMUST00000174806 N/A N/A N/A 9.361±0.00 N/A N/A 2.955±0.00 N/A N/A N/A 3.656±0.54 N/A N/A N/A
ENSMUST00000187610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099886 ENSMUST00000187464 N/A N/A N/A 0.030±0.00 N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100337 ENSMUST00000188479 0.105±0.02 N/A 0.023±0.00 N/A N/A 0.243±0.09 0.132±0.02 0.084±0.00 0.044±0.00 0.096±0.00 N/A N/A 0.050±0.00 0.164±0.05
ENSMUSG00000100782 ENSMUST00000190118 0.016±0.00 N/A N/A N/A N/A 0.048±0.02 0.172±0.05 0.014±0.00 N/A 0.082±0.02 N/A 0.094±0.04 0.012±0.01 0.015±0.00
ENSMUSG00000102075 ENSMUST00000189012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A

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