C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00090Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs728 VISTA 9606 20:52360797-52961449
GeneTranscriptPositionBiotype
ENSG00000225785 (RP4-583K8.1)
 ENST00000414598 (RP4-583K8.1-001) 52451464-52455619 lincRNA
ENSG00000232286 (RP11-80K6.2)
 ENST00000426963 (RP11-80K6.2-001) 52858338-52862855 lincRNA
ENSG00000232294 (RP4-715N11.2)
 ENST00000413070 (RP4-715N11.2-002) 52674411-52681578 lincRNA
ENST00000421642 (RP4-715N11.2-005) 52671917-52690608 lincRNA
ENST00000422666 (RP4-715N11.2-001) 52685122-52690929 lincRNA
ENST00000425279 (RP4-715N11.2-004) 52681428-52690580 lincRNA
ENST00000437987 (RP4-715N11.2-006) 52681428-52690580 lincRNA
ENST00000448013 (RP4-715N11.2-003) 52681428-52690580 lincRNA
ENSG00000232465 (RP5-1022J11.2)
 ENST00000416237 (RP5-1022J11.2-001) 52487922-52500591 lincRNA
ENSG00000234821 (MRPS33P4)
mitochondrial ribosomal protein S33 pseudogene 4 		ENST00000434892 (MRPS33P4-001) 52511252-52511568 processed_pseudogene
ENSG00000234948 (LINC01524)
long intergenic non-protein coding RNA 1524 		ENST00000428009 (LINC01524-002) 52620838-52650431 lincRNA
ENST00000454600 (LINC01524-001) 52210645-52646741 lincRNA
ENSG00000275958 (uc_338)
TUC338 		ENST00000615470 (uc_338.1-214) 52482801-52482991 misc_RNA
CIL_00090Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs728 VISTA 10090 2:169037094-169638185
GeneTranscriptPositionBiotype
ENSMUSG00000080415 (Gm26469)
predicted gene, 26469 		ENSMUST00000116765 (Gm26469-201) 169061120-169061240 miRNA
ENSMUSG00000085350 (4930529I22Rik)
RIKEN cDNA 4930529I22 gene 		ENSMUST00000131509 (4930529I22Rik-001) 169399145-169405450 lincRNA
ENSMUSG00000085369 (9430093N23Rik)
RIKEN cDNA 9430093N23 gene 		ENSMUST00000152494 (9430093N23Rik-001) 169234991-169237770 lincRNA
ENSMUSG00000086238 (Gm14258)
predicted gene 14258 		ENSMUST00000144607 (Gm14258-001) 169106453-169110415 lincRNA
ENSMUSG00000086840 (Gm14250)
predicted gene 14250 		ENSMUST00000148458 (Gm14250-001) 169389081-169395524 lincRNA
ENSMUSG00000087074 (Gm14249)
predicted gene 14249 		ENSMUST00000156239 (Gm14249-001) 169480617-169504843 lincRNA
ENSMUSG00000096972 (Gm26883)
predicted gene, 26883 		ENSMUST00000180945 (Gm26883-201) 169633676-169888503 lincRNA
ENSMUST00000181446 (Gm26883-202) 169633646-169888503 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00090Y_0001ENSG00000225785ENST00000414598ENSG00000232286ENST00000426963ENSG00000232294ENST00000413070ENST00000421642ENST00000422666ENST00000425279ENST00000437987ENST00000448013ENSG00000232465ENST00000416237ENSG00000234821ENST00000434892ENSG00000234948ENST00000428009ENST00000454600ENSG00000275958ENST00000615470CIL_00090Y_0002ENSMUSG00000080415ENSMUST00000116765ENSMUSG00000085350ENSMUST00000131509ENSMUSG00000085369ENSMUST00000152494ENSMUSG00000086238ENSMUST00000144607ENSMUSG00000086840ENSMUST00000148458ENSMUSG00000087074ENSMUST00000156239ENSMUSG00000096972ENSMUST00000180945ENSMUST00000181446
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00090Y_0001ENSG00000225785ENST00000414598ENSG00000232286ENST00000426963ENSG00000232294ENST00000413070ENST00000421642ENST00000422666ENST00000425279ENST00000448013ENSG00000232465ENST00000416237ENSG00000234821ENST00000434892ENSG00000234948ENST00000428009ENST00000454600ENSG00000275958ENST00000615470CIL_00090Y_0002ENSMUSG00000080415ENSMUST00000116765ENSMUSG00000085350ENSMUST00000131509ENSMUSG00000085369ENSMUST00000152494ENSMUSG00000086238ENSMUST00000144607ENSMUSG00000086840ENSMUST00000148458ENSMUSG00000087074ENSMUST00000156239ENSMUSG00000096972ENSMUST00000180945ENSMUST00000181446
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000225785 ENST00000414598 N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.480±0.31
ENSG00000232286 ENST00000426963 N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000232294 ENST00000413070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.26
ENST00000421642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.769±0.00
ENST00000422666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.075±0.00
ENST00000425279 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.285±0.00
ENSG00000232465 ENST00000416237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.055±0.09
ENSG00000234821 ENST00000434892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.00
ENSG00000234948 ENST00000428009 0.021±0.00 0.003±0.00 N/A 0.013±0.00 N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A 0.011±0.00 0.076±0.04
ENST00000454600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.02 1.234±0.00
ENSG00000275958 ENST00000615470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000080415 ENSMUST00000116765 N/A N/A N/A N/A 1068.270±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085350 ENSMUST00000131509 N/A N/A N/A 0.052±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.415±2.52
ENSMUSG00000085369 ENSMUST00000152494 N/A N/A 0.022±0.00 N/A N/A 0.145±0.01 N/A N/A 0.114±0.04 N/A N/A N/A 0.044±0.02 0.116±0.05
ENSMUSG00000086238 ENSMUST00000144607 N/A N/A N/A 0.027±0.02 0.037±0.00 N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A 0.020±0.00
ENSMUSG00000086840 ENSMUST00000148458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.776±0.72
ENSMUSG00000087074 ENSMUST00000156239 N/A N/A 0.039±0.00 0.069±0.03 N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.140±0.07 N/A 0.437±0.54
ENSMUSG00000096972 ENSMUST00000180945 N/A N/A N/A N/A 1.602±0.00 N/A N/A N/A N/A N/A 0.822±0.32 N/A 0.315±0.15 N/A
ENSMUST00000181446 22.888±2.46 15.296±1.67 21.256±0.43 8.091±3.23 10.633±3.64 11.181±1.47 3.496±0.64 9.536±0.96 1.802±0.42 5.289±1.50 1.580±0.46 26.846±8.20 1.148±0.53 1.923±1.08

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