C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00091C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs264 VISTA 9606 5:77551756-78152775
GeneTranscriptPositionBiotype
ENSG00000132842 (AP3B1)
adaptor-related protein complex 3, beta 1 subunit 		ENST00000255194 (AP3B1-001) 78000525-78294755 protein_coding
ENST00000517561 (AP3B1-004) 78121722-78141170 processed_transcript
ENST00000517940 (AP3B1-009) 78088981-78116187 retained_intron
ENST00000519295 (AP3B1-002) 78002326-78294692 protein_coding
ENST00000519888 (AP3B1-005) 78087496-78113770 processed_transcript
ENST00000520122 (AP3B1-008) 78002995-78015873 retained_intron
ENST00000522901 (AP3B1-007) 78002338-78039150 protein_coding
ENST00000523204 (AP3B1-006) 78020708-78043250 processed_transcript
ENSG00000164253 (WDR41)
WD repeat domain 41 		ENST00000296679 (WDR41-001) 77430933-77492596 protein_coding
ENST00000414719 (WDR41-201) 77432245-77492289 protein_coding
ENST00000502528 (WDR41-007) 77432244-77452873 retained_intron
ENST00000503035 (WDR41-010) 77451291-77492477 nonsense_mediated_decay
ENST00000504895 (WDR41-024) 77453866-77491285 protein_coding
ENST00000505129 (WDR41-002) 77440817-77492496 nonsense_mediated_decay
ENST00000506307 (WDR41-013) 77440931-77492223 nonsense_mediated_decay
ENST00000506474 (WDR41-017) 77453889-77492220 nonsense_mediated_decay
ENST00000507029 (WDR41-003) 77432893-77492316 protein_coding
ENST00000507239 (WDR41-014) 77458859-77492222 retained_intron
ENST00000507452 (WDR41-020) 77449765-77492215 processed_transcript
ENST00000507654 (WDR41-021) 77436379-77492203 protein_coding
ENST00000508154 (WDR41-029) 77426654-77433159 processed_transcript
ENST00000509701 (WDR41-005) 77437407-77492220 nonsense_mediated_decay
ENST00000509858 (WDR41-027) 77463093-77620576 processed_transcript
ENST00000509892 (WDR41-019) 77449804-77492215 nonsense_mediated_decay
ENST00000509971 (WDR41-025) 77453879-77620611 protein_coding
ENST00000511036 (WDR41-009) 77451324-77492487 protein_coding
ENST00000511630 (WDR41-028) 77436360-77451353 protein_coding
ENST00000511791 (WDR41-011) 77438258-77492287 protein_coding
ENST00000512033 (WDR41-030) 77426652-77436279 processed_transcript
ENST00000512168 (WDR41-008) 77463124-77492507 processed_transcript
ENST00000513417 (WDR41-018) 77449831-77492220 nonsense_mediated_decay
ENST00000513917 (WDR41-023) 77463106-77499636 processed_transcript
ENST00000514451 (WDR41-022) 77463106-77492003 processed_transcript
ENST00000514559 (WDR41-015) 77451291-77492222 protein_coding
ENST00000514878 (WDR41-031) 77425970-77432955 processed_transcript
ENST00000515253 (WDR41-006) 77432813-77492199 protein_coding
ENST00000515321 (WDR41-016) 77449815-77492221 processed_transcript
ENSG00000171530 (TBCA)
tubulin folding cofactor A 		ENST00000306388 (TBCA-002) 77691241-77776287 protein_coding
ENST00000380377 (TBCA-001) 77691166-77776361 protein_coding
ENST00000517679 (TBCA-003) 77691241-77715317 protein_coding
ENST00000517881 (TBCA-009) 77691259-77694277 processed_transcript
ENST00000518218 (TBCA-008) 77691241-77708613 retained_intron
ENST00000518338 (TBCA-004) 77691267-77776261 protein_coding
ENST00000520039 (TBCA-007) 77693266-77776274 protein_coding
ENST00000520361 (TBCA-006) 77691248-77776293 protein_coding
ENST00000522370 (TBCA-005) 77691404-77868780 protein_coding
ENSG00000171540 (OTP)
orthopedia homeobox 		ENST00000306422 (OTP-001) 77628712-77639688 protein_coding
ENST00000515716 (OTP-002) 77635931-77636993 processed_transcript
ENSG00000213763 (ACTBP2)
actin, beta pseudogene 2 		ENST00000515712 (ACTBP2-001) 77784881-77786003 processed_pseudogene
ENSG00000222085 (AC024568.1)
 ENST00000410153 (AC024568.1-201) 78056624-78056746 miRNA
ENSG00000244363 (RPL7P23)
ribosomal protein L7 pseudogene 23 		ENST00000493874 (RPL7P23-001) 77582376-77583122 processed_pseudogene
ENSG00000253558 (CTD-2179L22.1)
 ENST00000517330 (CTD-2179L22.1-001) 78041879-78044138 transcribed_processed_pseudogene
ENSG00000253572 (RP11-107N7.1)
 ENST00000523413 (RP11-107N7.1-001) 77942757-77946438 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00091C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs264 VISTA 10090 13:94401860-95002912
GeneTranscriptPositionBiotype
ENSMUSG00000021685 (Otp)
orthopedia homolog (Drosophila) 		ENSMUST00000022195 (Otp-001) 94875602-94885130 protein_coding
ENSMUST00000184985 (Otp-002) 94882600-94883552 processed_transcript
ENSMUSG00000021686 (Ap3b1)
adaptor-related protein complex 3, beta 1 subunit 		ENSMUST00000022196 (Ap3b1-201) 94358960-94566316 protein_coding
ENSMUSG00000042015 (Wdr41)
WD repeat domain 41 		ENSMUST00000056512 (Wdr41-201) 94976348-95023314 protein_coding
ENSMUST00000159647 (Wdr41-004) 94976438-95014477 protein_coding
ENSMUST00000160115 (Wdr41-002) 94976344-95014531 protein_coding
ENSMUST00000160409 (Wdr41-003) 94976438-95014477 protein_coding
ENSMUST00000160801 (Wdr41-001) 94976348-95023313 protein_coding
ENSMUST00000167155 (Wdr41-202) 94976438-95014477 protein_coding
ENSMUSG00000042043 (Tbca)
tubulin cofactor A 		ENSMUST00000046644 (Tbca-201) 94788943-94842899 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00091C_0001ENSG00000132842ENST00000255194ENST00000517940ENST00000519295ENST00000519888ENST00000522901ENSG00000164253ENST00000296679ENST00000414719ENST00000502528ENST00000506474ENST00000507029ENST00000507239ENST00000507452ENST00000515253ENSG00000171530ENST00000306388ENST00000380377ENST00000517881ENST00000518218ENST00000518338ENST00000520361ENST00000522370ENSG00000171540ENST00000306422ENST00000515716ENSG00000213763ENST00000515712ENSG00000222085ENST00000410153ENSG00000244363ENST00000493874ENSG00000253558ENST00000517330ENSG00000253572ENST00000523413CIL_00091C_0002ENSMUSG00000021685ENSMUST00000022195ENSMUST00000184985ENSMUSG00000021686ENSMUST00000022196ENSMUSG00000042015ENSMUST00000056512ENSMUST00000160115ENSMUST00000160801ENSMUSG00000042043ENSMUST00000046644
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132842 ENST00000255194 N/A 0.503±0.00 N/A N/A N/A N/A 0.295±0.00 N/A 0.541±0.31 N/A N/A N/A N/A N/A
ENST00000517561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517940 N/A N/A N/A N/A N/A N/A N/A 2.099±0.00 N/A N/A N/A 4.171±0.00 N/A 4.514±0.00
ENST00000519295 10.931±0.00 5.054±0.00 3.995±0.00 3.342±0.77 5.141±1.90 6.256±1.66 3.134±1.62 6.777±4.00 2.401±0.34 2.910±0.35 1.591±1.15 5.078±1.70 10.379±3.73 6.250±0.76
ENST00000519888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A
ENST00000520122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522901 N/A 2.816±0.00 N/A N/A N/A N/A N/A 6.429±0.00 3.157±0.00 3.613±0.00 1.778±0.00 5.560±0.00 N/A N/A
ENST00000523204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164253 ENST00000296679 1.959±0.00 0.810±0.00 1.096±0.00 4.530±0.00 1.706±0.00 1.779±0.23 0.971±0.38 1.751±0.00 1.438±0.64 2.524±0.78 0.561±0.00 1.570±0.91 1.521±0.23 2.196±0.34
ENST00000414719 N/A 2.286±0.00 N/A 8.403±0.00 5.757±0.00 N/A 1.061±0.32 N/A 2.042±1.11 1.797±0.00 0.786±0.07 3.139±0.49 3.340±1.40 5.582±0.45
ENST00000502528 N/A N/A 1.313±0.00 N/A 1.801±0.00 N/A 0.452±0.00 N/A N/A 3.273±0.00 N/A 1.010±0.00 N/A N/A
ENST00000503035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506474 N/A N/A 6.812±0.00 N/A 16.055±0.00 7.911±0.00 8.264±0.00 9.235±0.00 N/A 17.277±0.00 12.781±0.00 7.609±0.00 N/A N/A
ENST00000507029 4.325±0.00 1.868±0.00 N/A N/A N/A N/A 3.538±0.00 6.377±0.00 1.531±0.00 4.122±0.00 0.713±0.00 N/A N/A 7.598±2.95
ENST00000507239 N/A N/A N/A N/A N/A 7.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.409±0.00 N/A N/A N/A
ENST00000507654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515253 N/A N/A N/A N/A N/A 2.650±0.00 N/A 2.929±0.00 N/A N/A 1.089±0.00 1.310±0.00 N/A N/A
ENST00000515321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171530 ENST00000306388 N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380377 21.352±0.00 20.480±0.00 5.943±0.00 22.046±0.51 9.742±0.40 12.481±6.33 9.842±3.69 28.038±0.44 13.139±0.88 8.971±1.38 3.156±0.00 57.149±35.42 61.948±18.58 37.383±1.51
ENST00000517679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517881 24.313±0.00 25.150±0.00 N/A 37.074±0.00 34.826±0.00 41.779±0.00 17.647±0.00 76.048±0.00 32.665±0.00 16.397±0.00 N/A 51.914±18.06 41.469±2.94 50.829±0.00
ENST00000518218 N/A N/A N/A N/A N/A 2.311±0.00 N/A N/A N/A N/A N/A 2.433±0.00 N/A N/A
ENST00000518338 7.066±0.00 16.839±0.00 N/A N/A 13.374±0.00 20.346±0.00 N/A N/A 16.829±0.00 11.242±0.00 N/A 19.594±0.00 36.008±0.00 27.180±0.00
ENST00000520039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520361 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.021±0.00 16.244±0.00 N/A N/A N/A
ENST00000522370 N/A N/A N/A 20.901±0.00 14.659±0.00 19.557±0.00 10.965±0.00 47.282±0.00 29.494±0.00 29.775±0.00 19.945±0.00 N/A N/A N/A
ENSG00000171540 ENST00000306422 N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A 0.143±0.02
ENST00000515716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00
ENSG00000213763 ENST00000515712 N/A 0.914±0.00 N/A 0.150±0.10 0.748±0.00 0.546±0.00 N/A 0.209±0.00 0.352±0.00 0.566±0.00 0.292±0.00 N/A 0.127±0.07 0.583±0.00
ENSG00000222085 ENST00000410153 N/A N/A 21.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.095±0.00 N/A N/A
ENSG00000244363 ENST00000493874 0.210±0.00 0.310±0.00 N/A 0.063±0.01 0.164±0.02 0.224±0.11 0.035±0.00 0.074±0.00 0.050±0.02 0.293±0.05 0.114±0.00 0.558±0.50 0.602±0.49 0.230±0.16
ENSG00000253558 ENST00000517330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A
ENSG00000253572 ENST00000523413 N/A 0.091±0.00 N/A 0.075±0.00 0.140±0.00 N/A 0.050±0.00 N/A N/A 0.046±0.00 0.016±0.00 N/A N/A 0.066±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021685 ENSMUST00000022195 N/A N/A N/A 6.950±5.59 N/A N/A N/A N/A 0.004±0.00 N/A N/A N/A 0.009±0.00 0.016±0.00
ENSMUST00000184985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 0.060±0.03
ENSMUSG00000021686 ENSMUST00000022196 11.009±0.98 8.544±2.85 14.372±1.30 8.804±1.02 8.966±1.58 13.478±0.93 4.370±0.20 10.695±1.05 8.162±1.35 8.267±0.87 2.307±0.67 12.391±5.58 26.293±7.29 38.745±11.75
ENSMUSG00000042015 ENSMUST00000056512 N/A 3.251±0.99 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160115 N/A 4.622±0.88 N/A N/A N/A 0.630±0.00 N/A N/A N/A 1.653±0.19 N/A 2.871±0.70 N/A N/A
ENSMUST00000160409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160801 8.459±1.30 9.294±0.97 11.513±2.05 8.403±2.76 8.560±0.92 5.654±0.95 6.779±1.15 6.466±0.36 3.761±0.59 8.474±0.93 7.047±0.51 12.728±7.96 3.564±1.56 3.928±1.24
ENSMUST00000167155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042043 ENSMUST00000046644 10.676±1.15 1.121±0.30 167.377±9.01 126.820±11.40 5.926±3.16 5.369±0.87 14.484±5.69 19.282±3.97 75.375±75.31 9.733±4.11 26.448±2.37 94.249±174.74 282.514±123.48 142.063±214.01

Loading