C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00091U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1532 VISTA 9606 12:16718777-17321842
GeneTranscriptPositionBiotype
ENSG00000213235 (EEF1A1P16)
eukaryotic translation elongation factor 1 alpha 1 pseudogene 16 		ENST00000325349 (EEF1A1P16-001) 16990670-16992083 processed_pseudogene
ENSG00000242991 (RPL7P40)
ribosomal protein L7 pseudogene 40 		ENST00000481703 (RPL7P40-001) 17121716-17122460 processed_pseudogene
ENSG00000256211 (RP11-1018J11.1)
 ENST00000444513 (RP11-1018J11.1-001) 16989126-16989936 processed_pseudogene
CIL_00091U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1532 VISTA 10090 6:138450055-139055631
GeneTranscriptPositionBiotype
ENSMUSG00000030226 (Lmo3)
LIM domain only 3 		ENSMUST00000067437 (Lmo3-006) 138364439-138422831 nonsense_mediated_decay
ENSMUST00000160050 (Lmo3-008) 138364962-138424615 nonsense_mediated_decay
ENSMUST00000161450 (Lmo3-007) 138365595-138422917 protein_coding
ENSMUST00000162185 (Lmo3-005) 138377208-138422999 protein_coding
ENSMUST00000162772 (Lmo3-001) 138362918-138581968 protein_coding
ENSMUST00000162932 (Lmo3-003) 138416415-138426816 protein_coding
ENSMUST00000163024 (Lmo3-002) 138365591-138422974 protein_coding
ENSMUST00000163065 (Lmo3-004) 138364196-138421452 protein_coding
ENSMUSG00000046717 (Igbp1b)
immunoglobulin (CD79A) binding protein 1b 		ENSMUST00000054786 (Igbp1b-201) 138657095-138658444 protein_coding
ENSMUSG00000100166 (RP24-96N20.1)
RIKEN cDNA B230110G15 gene 		ENSMUST00000190868 (RP24-96N20.1-001) 138580624-138599314 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00091U_0001ENSG00000213235ENST00000325349ENSG00000242991ENST00000481703ENSG00000256211ENST00000444513CIL_00091U_0002ENSMUSG00000030226ENSMUST00000067437ENSMUST00000160050ENSMUST00000161450ENSMUST00000162185ENSMUST00000162772ENSMUST00000162932ENSMUST00000163024ENSMUST00000163065ENSMUSG00000046717ENSMUST00000054786ENSMUSG00000100166ENSMUST00000190868
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00091U_0001ENSG00000213235ENST00000325349ENSG00000242991ENST00000481703ENSG00000256211ENST00000444513CIL_00091U_0002ENSMUSG00000030226ENSMUST00000067437ENSMUST00000160050ENSMUST00000161450ENSMUST00000162185ENSMUST00000162772ENSMUST00000162932ENSMUST00000163024ENSMUST00000163065ENSMUSG00000046717ENSMUST00000054786ENSMUSG00000100166ENSMUST00000190868
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213235 ENST00000325349 0.444±0.00 0.534±0.00 N/A 0.169±0.00 0.395±0.00 0.428±0.00 0.033±0.00 0.309±0.00 0.095±0.00 0.582±0.00 0.210±0.00 0.104±0.09 N/A 0.206±0.05
ENSG00000242991 ENST00000481703 0.058±0.00 N/A N/A 0.209±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256211 ENST00000444513 N/A N/A N/A 0.022±0.00 0.022±0.00 0.020±0.00 0.060±0.00 0.044±0.00 N/A N/A 0.059±0.00 N/A 0.158±0.00 0.028±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030226 ENSMUST00000067437 0.061±0.00 0.070±0.00 N/A 8.406±0.00 N/A N/A 0.016±0.00 0.023±0.00 0.018±0.01 N/A N/A 0.079±0.07 N/A 0.022±0.00
ENSMUST00000160050 N/A 0.123±0.00 N/A N/A N/A N/A 0.022±0.00 N/A 0.014±0.00 N/A N/A 0.224±0.02 0.011±0.00 N/A
ENSMUST00000161450 0.037±0.00 0.280±0.00 0.115±0.00 29.445±0.00 N/A 0.222±0.10 N/A 0.035±0.00 0.007±0.00 N/A 0.016±0.00 0.117±0.06 N/A 0.077±0.00
ENSMUST00000162185 0.084±0.00 0.146±0.07 N/A N/A 0.156±0.00 N/A N/A N/A 0.037±0.04 0.109±0.04 N/A 0.435±0.25 N/A N/A
ENSMUST00000162772 0.018±0.01 N/A 0.028±0.00 11.199±6.13 N/A 0.182±0.06 0.023±0.00 0.033±0.00 0.011±0.01 N/A 0.011±0.00 0.085±0.05 0.003±0.00 0.035±0.00
ENSMUST00000162932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.07 N/A N/A
ENSMUST00000163024 0.122±0.00 0.170±0.10 0.167±0.02 15.903±0.00 N/A 0.347±0.00 N/A N/A 0.029±0.00 N/A N/A 0.204±0.00 N/A N/A
ENSMUST00000163065 N/A N/A 0.154±0.04 10.425±0.44 N/A 0.158±0.00 0.022±0.01 0.035±0.00 0.009±0.00 N/A 0.014±0.00 0.073±0.05 0.012±0.00 0.011±0.00
ENSMUSG00000046717 ENSMUST00000054786 N/A N/A N/A 0.119±0.07 N/A N/A 0.026±0.00 0.024±0.00 N/A N/A N/A N/A 0.024±0.01 15.982±1.65
ENSMUSG00000100166 ENSMUST00000190868 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A

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