C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000924_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1539 VISTA 9606 14:28941679-29544134
GeneTranscriptPositionBiotype
ENSG00000257522 (RP11-562L8.1)
 ENST00000548306 (RP11-562L8.1-002) 29274753-29381290 lincRNA
ENST00000548665 (RP11-562L8.1-005) 29274723-29353802 lincRNA
ENST00000550975 (RP11-562L8.1-004) 29264844-29378560 lincRNA
ENST00000551040 (RP11-562L8.1-003) 29264381-29378656 antisense
ENST00000551110 (RP11-562L8.1-001) 29267592-29381295 lincRNA
ENSG00000257523 (CTD-2384A14.2)
 ENST00000552028 (CTD-2384A14.2-001) 28975836-28978924 lincRNA
ENSG00000258028 (RP11-148E17.1)
 ENST00000551227 (RP11-148E17.1-001) 28936889-29028763 lincRNA
ENSG00000258038 (CTD-2384A14.1)
 ENST00000548087 (CTD-2384A14.1-003) 28830247-28837717 lincRNA
ENST00000548775 (CTD-2384A14.1-005) 28830445-28842082 lincRNA
ENST00000550122 (CTD-2384A14.1-002) 28830250-28837658 lincRNA
ENST00000550827 (CTD-2384A14.1-004) 28830244-28842337 lincRNA
ENST00000550990 (CTD-2384A14.1-006) 28931570-28968392 lincRNA
ENST00000551588 (CTD-2384A14.1-001) 28830248-28968400 lincRNA
ENSG00000258107 (RP11-260G13.1)
 ENST00000549515 (RP11-260G13.1-001) 29390346-29436412 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
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CIL_000924_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1539 VISTA 10090 12:49673353-50275979
GeneTranscriptPositionBiotype
ENSMUSG00000098219 (Gm7481)
predicted gene 7481 		ENSMUST00000182020 (Gm7481-001) 49840757-49841751 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000924_0001ENSG00000257522ENST00000548306ENST00000548665ENST00000550975ENST00000551040ENST00000551110ENSG00000257523ENST00000552028ENSG00000258028ENST00000551227ENSG00000258038ENST00000548087ENST00000548775ENST00000550122ENST00000550827ENST00000550990ENST00000551588ENSG00000258107ENST00000549515CIL_000924_0002ENSMUSG00000098219ENSMUST00000182020
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000924_0001ENSG00000257522ENST00000548306ENST00000548665ENST00000550975ENST00000551040ENST00000551110ENSG00000257523ENST00000552028ENSG00000258028ENST00000551227ENSG00000258038ENST00000548087ENST00000550122ENST00000550827ENST00000551588ENSG00000258107ENST00000549515CIL_000924_0002ENSMUSG00000098219ENSMUST00000182020
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000257522 ENST00000548306 N/A N/A 0.117±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548665 N/A N/A N/A N/A N/A 0.023±0.00 N/A 0.022±0.00 0.156±0.00 0.176±0.00 N/A N/A 0.068±0.00
ENST00000550975 N/A N/A 1.002±0.00 N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A 0.089±0.00
ENST00000551040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00
ENST00000551110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00
ENSG00000257523 ENST00000552028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.577±0.18
ENSG00000258028 ENST00000551227 N/A N/A 0.051±0.00 N/A N/A 0.029±0.00 N/A N/A 0.040±0.00 N/A N/A 0.149±0.03 0.450±0.01
ENSG00000258038 ENST00000548087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A
ENST00000548775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550122 0.131±0.00 0.360±0.00 0.158±0.00 0.244±0.00 0.105±0.00 0.124±0.00 0.150±0.00 0.066±0.00 0.336±0.00 0.184±0.00 0.047±0.00 0.309±0.00 N/A
ENST00000550827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 1.255±0.77 N/A
ENST00000550990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.182±0.00 1.371±0.11
ENSG00000258107 ENST00000549515 N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000098219 ENSMUST00000182020 N/A N/A 0.016±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00

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