C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00092V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1327 VISTA 9606 5:1904343-2508266
GeneTranscriptPositionBiotype
ENSG00000248597 (RP11-259O2.2)
 ENST00000511698 (RP11-259O2.2-001) 1963609-1967154 lincRNA
ENSG00000248994 (RP11-259O2.1)
 ENST00000511693 (RP11-259O2.1-001) 1933863-1959176 lincRNA
ENST00000513419 (RP11-259O2.1-002) 1939772-1958901 lincRNA
ENSG00000249731 (RP11-259O2.3)
 ENST00000514519 (RP11-259O2.3-001) 1968094-1969013 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00092V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1327 VISTA 10090 13:72733138-73336182
GeneTranscriptPositionBiotype
ENSMUSG00000021604 (Irx4)
Iroquois related homeobox 4 (Drosophila) 		ENSMUST00000022095 (Irx4-001) 73260497-73269608 protein_coding
ENSMUST00000176684 (Irx4-002) 73260479-73269608 protein_coding
ENSMUSG00000021606 (Ndufs6)
NADH dehydrogenase (ubiquinone) Fe-S protein 6 		ENSMUST00000022097 (Ndufs6-001) 73319874-73328542 protein_coding
ENSMUST00000147407 (Ndufs6-002) 73319879-73328452 nonsense_mediated_decay
ENSMUSG00000021607 (Mrpl36)
mitochondrial ribosomal protein L36 		ENSMUST00000022098 (Mrpl36-201) 73331009-73332175 protein_coding
ENSMUSG00000066407 (Gm10263)
predicted gene 10263 		ENSMUST00000085163 (Gm10263-201) 73317844-73318143 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00092V_0001ENSG00000248597ENST00000511698ENSG00000248994ENST00000511693ENST00000513419ENSG00000249731ENST00000514519CIL_00092V_0002ENSMUSG00000021604ENSMUST00000022095ENSMUST00000176684ENSMUSG00000021606ENSMUST00000022097ENSMUST00000147407ENSMUSG00000021607ENSMUST00000022098ENSMUSG00000066407ENSMUST00000085163
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00092V_0001ENSG00000248597ENST00000511698ENSG00000248994ENST00000511693ENST00000513419ENSG00000249731ENST00000514519CIL_00092V_0002ENSMUSG00000021604ENSMUST00000022095ENSMUST00000176684ENSMUSG00000021606ENSMUST00000022097ENSMUST00000147407ENSMUSG00000021607ENSMUST00000022098ENSMUSG00000066407ENSMUST00000085163
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000248597 ENST00000511698 N/A N/A N/A 0.157±0.00 0.260±0.00 N/A 0.034±0.00 0.074±0.00 N/A N/A N/A 0.143±0.00 N/A 0.227±0.00
ENSG00000248994 ENST00000511693 N/A 0.051±0.00 N/A 0.235±0.00 0.358±0.14 0.190±0.00 0.109±0.06 0.052±0.00 N/A 0.287±0.00 N/A 0.264±0.08 N/A 0.633±0.00
ENST00000513419 0.077±0.00 N/A N/A N/A 0.216±0.00 0.241±0.00 N/A N/A N/A N/A N/A N/A N/A 0.231±0.00
ENSG00000249731 ENST00000514519 3.867±0.00 10.098±0.00 45.604±0.00 17.581±11.50 29.151±24.72 24.559±21.11 25.499±19.35 21.727±16.67 27.429±26.27 32.069±29.99 9.624±8.28 20.236±20.12 8.039±5.68 16.068±10.50
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021604 ENSMUST00000022095 N/A N/A N/A 0.511±0.32 0.750±0.21 N/A 2.806±1.23 0.094±0.01 0.011±0.00 N/A N/A N/A 0.113±0.00 N/A
ENSMUST00000176684 N/A 0.042±0.02 N/A 0.448±0.38 0.947±0.55 0.240±0.09 3.462±1.20 0.081±0.02 0.005±0.00 N/A 0.028±0.00 0.038±0.02 3.201±0.00 N/A
ENSMUSG00000021606 ENSMUST00000022097 41.467±5.31 11.022±1.67 116.951±16.12 81.466±11.84 30.574±10.50 32.156±6.83 274.758±23.78 143.037±37.85 97.156±44.84 29.193±4.42 181.486±14.14 32.612±34.25 85.679±36.08 62.087±7.18
ENSMUST00000147407 6.687±2.18 6.287±2.98 N/A N/A 6.337±2.34 8.265±2.10 N/A 16.135±0.00 13.348±2.59 4.216±0.94 18.282±0.00 6.482±3.00 N/A 16.506±5.28
ENSMUSG00000021607 ENSMUST00000022098 44.237±5.64 142.217±16.32 37.747±3.62 20.839±10.89 71.981±29.58 100.397±7.31 29.759±5.07 46.777±6.57 44.869±7.52 46.652±6.97 23.938±1.72 64.479±26.00 24.748±10.18 12.159±5.36
ENSMUSG00000066407 ENSMUST00000085163 0.934±0.59 45.574±3.67 0.912±0.01 1.912±1.33 4.202±1.37 23.602±25.77 8.860±5.77 19.663±11.99 14.046±18.55 5.275±0.22 0.317±0.09 11.863±13.75 0.837±0.42 7.986±4.62

Loading