C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00093C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1448 VISTA 9606 20:55366588-55969614
GeneTranscriptPositionBiotype
ENSG00000224008 (LINC01441)
long intergenic non-protein coding RNA 1441 		ENST00000433766 (LINC01441-001) 55420336-55427197 lincRNA
ENSG00000235166 (LINC01440)
long intergenic non-protein coding RNA 1440 		ENST00000416190 (LINC01440-002) 55423043-55468214 lincRNA
ENST00000450623 (LINC01440-001) 55423011-55426790 lincRNA
ENST00000596828 (LINC01440-004) 55423370-55426692 lincRNA
ENST00000598445 (LINC01440-003) 55423020-55426692 lincRNA
ENST00000608080 (LINC01440-005) 55423061-55426421 lincRNA
ENST00000610112 (LINC01440-006) 55423055-55426680 lincRNA
CIL_00093C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1448 VISTA 10090 2:171430381-172036633
GeneTranscriptPositionBiotype
ENSMUSG00000067578 (Cbln4)
cerebellin 4 precursor protein 		ENSMUST00000087950 (Cbln4-001) 172036233-172043466 protein_coding
ENSMUSG00000085426 (Gm14272)
predicted gene 14272 		ENSMUST00000133525 (Gm14272-001) 171988195-171989195 lincRNA
ENSMUSG00000086823 (1700028P15Rik)
RIKEN cDNA 1700028P15 gene 		ENSMUST00000125465 (1700028P15Rik-004) 171958189-171962824 retained_intron
ENSMUST00000139894 (1700028P15Rik-001) 171956879-171962799 lincRNA
ENSMUST00000151904 (1700028P15Rik-003) 171958188-171962131 lincRNA
ENSMUSG00000087100 (Gm14641)
predicted gene 14641 		ENSMUST00000136486 (Gm14641-001) 171995941-172003995 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisCIL_00093C_0001ENSG00000224008ENST00000433766ENSG00000235166ENST00000416190ENST00000450623ENST00000596828ENST00000598445ENST00000608080ENST00000610112CIL_00093C_0002ENSMUSG00000067578ENSMUST00000087950ENSMUSG00000085426ENSMUST00000133525ENSMUSG00000086823ENSMUST00000125465ENSMUST00000139894ENSMUST00000151904ENSMUSG00000087100ENSMUST00000136486
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisCIL_00093C_0001ENSG00000224008ENST00000433766ENSG00000235166ENST00000416190ENST00000450623ENST00000596828ENST00000598445CIL_00093C_0002ENSMUSG00000067578ENSMUST00000087950ENSMUSG00000085426ENSMUST00000133525ENSMUSG00000086823ENSMUST00000125465ENSMUST00000139894ENSMUSG00000087100ENSMUST00000136486
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSG00000224008 ENST00000433766 0.068±0.00 0.073±0.00 0.005±0.00 0.022±0.01 0.004±0.00 N/A 0.042±0.01 0.034±0.00 0.008±0.00 0.019±0.00 0.019±0.00 0.131±0.00
ENSG00000235166 ENST00000416190 N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A
ENST00000450623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.914±0.97
ENST00000596828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.599±0.00
ENST00000598445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.170±0.00
ENST00000608080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUSG00000067578 ENSMUST00000087950 N/A N/A 4.378±1.09 N/A 0.194±0.05 N/A N/A 0.015±0.01 0.015±0.00 0.028±0.02 0.021±0.01 0.122±0.07
ENSMUSG00000085426 ENSMUST00000133525 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.378±0.34 N/A N/A
ENSMUSG00000086823 ENSMUST00000125465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.27
ENSMUST00000139894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.375±0.00
ENSMUST00000151904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087100 ENSMUST00000136486 N/A N/A N/A N/A N/A 0.100±0.00 N/A N/A N/A 0.382±0.06 N/A N/A

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