C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00094V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm108 VISTA 9606 6:166171962-166774036
GeneTranscriptPositionBiotype
ENSG00000071242 (RPS6KA2)
ribosomal protein S6 kinase, 90kDa, polypeptide 2 		ENST00000265678 (RPS6KA2-001) 166409364-166627243 protein_coding
ENST00000366865 (RPS6KA2-002) 166475726-166510310 processed_transcript
ENST00000405189 (RPS6KA2-007) 166412748-166542450 protein_coding
ENST00000481261 (RPS6KA2-006) 166412659-166544690 protein_coding
ENST00000491836 (RPS6KA2-004) 166439889-166459551 processed_transcript
ENST00000503859 (RPS6KA2-003) 166411232-166862551 protein_coding
ENST00000506565 (RPS6KA2-009) 166508223-166862670 protein_coding
ENST00000507350 (RPS6KA2-013) 166498611-166627522 protein_coding
ENST00000507371 (RPS6KA2-011) 166504599-166757911 protein_coding
ENST00000509742 (RPS6KA2-008) 166412296-166423984 processed_transcript
ENST00000510118 (RPS6KA2-005) 166409388-166862511 protein_coding
ENST00000511034 (RPS6KA2-012) 166510280-166627972 protein_coding
ENST00000512860 (RPS6KA2-010) 166504515-166906451 protein_coding
ENSG00000176381 (PRR18)
proline rich 18 		ENST00000322583 (PRR18-001) 166305300-166308383 protein_coding
ENST00000529616 (PRR18-002) 166307793-166308448 protein_coding
ENSG00000198818 (SFT2D1)
SFT2 domain containing 1 		ENST00000361731 (SFT2D1-002) 166319728-166342591 protein_coding
ENST00000478705 (SFT2D1-004) 166320156-166342576 processed_transcript
ENST00000479490 (SFT2D1-005) 166320028-166324688 processed_transcript
ENST00000487841 (SFT2D1-003) 166319860-166342547 processed_transcript
ENST00000488773 (SFT2D1-001) 166324361-166331407 processed_transcript
ENST00000494682 (SFT2D1-006) 166325873-166328339 processed_transcript
ENSG00000232082 (RPS6KA2-IT1)
RPS6KA2 intronic transcript 1 (non-protein coding) 		ENST00000416770 (RPS6KA2-IT1-001) 166460663-166465383 sense_intronic
ENSG00000233231 (HNRNPA1P49)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 49 		ENST00000421336 (HNRNPA1P49-001) 166334568-166335471 processed_pseudogene
ENSG00000235008 (RP3-497J21.1)
 ENST00000454907 (RP3-497J21.1-001) 166701094-166702839 processed_pseudogene
ENSG00000235272 (FAM103A2P)
family with sequence similarity 103, member A2 pseudogene 		ENST00000444122 (FAM103A2P-001) 166586124-166586477 processed_pseudogene
ENSG00000261420 (RP1-168L15.5)
 ENST00000568025 (RP1-168L15.5-001) 166383189-166384824 antisense
ENSG00000280057 (RP1-168L15.6)
 ENST00000623222 (RP1-168L15.6-001) 166388136-166389920 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_00094V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm108 VISTA 10090 17:6968493-7569968
GeneTranscriptPositionBiotype
ENSMUSG00000023809 (Rps6ka2)
ribosomal protein S6 kinase, polypeptide 2 		ENSMUST00000024575 (Rps6ka2-201) 7170115-7303313 protein_coding
ENSMUSG00000056133 (Gm9992)
predicted gene 9992 		ENSMUST00000070059 (Gm9992-201) 7363712-7385305 protein_coding
ENSMUSG00000071322 (Tcp10a)
t-complex protein 10a 		ENSMUST00000095726 (Tcp10a-001) 7324646-7345974 protein_coding
ENSMUST00000128533 (Tcp10a-002) 7324667-7345502 protein_coding
ENSMUST00000129709 (Tcp10a-003) 7324686-7345198 protein_coding
ENSMUST00000138222 (Tcp10a-007) 7324734-7345512 protein_coding
ENSMUST00000140192 (Tcp10a-005) 7324711-7345013 protein_coding
ENSMUST00000144861 (Tcp10a-004) 7324869-7334337 protein_coding
ENSMUST00000147803 (Tcp10a-008) 7324689-7325899 protein_coding
ENSMUSG00000079722 (Ttll2)
tubulin tyrosine ligase-like family, member 2 		ENSMUST00000115747 (Ttll2-201) 7350904-7352696 protein_coding
ENSMUSG00000094369 (Gm26057)
predicted gene, 26057 		ENSMUST00000178099 (Gm26057-201) 7374193-7374357 snRNA
ENSMUSG00000094724 (Rnaset2b)
ribonuclease T2B 		ENSMUST00000089119 (Rnaset2b-201) 6978860-6998193 protein_coding
ENSMUST00000179728 (Rnaset2b-202) 6978907-7011299 protein_coding
ENSMUSG00000095720 (Gm1604b)
predicted gene 1604b 		ENSMUST00000089120 (Gm1604b-201) 7025837-7087467 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00094V_0001ENSG00000071242ENST00000265678ENST00000366865ENST00000405189ENST00000481261ENST00000491836ENST00000503859ENST00000506565ENST00000507350ENST00000507371ENST00000509742ENST00000510118ENST00000511034ENST00000512860ENSG00000176381ENST00000322583ENST00000529616ENSG00000198818ENST00000361731ENST00000478705ENST00000479490ENST00000487841ENST00000488773ENST00000494682ENSG00000232082ENST00000416770ENSG00000233231ENST00000421336ENSG00000235008ENST00000454907ENSG00000235272ENST00000444122ENSG00000261420ENST00000568025ENSG00000280057ENST00000623222CIL_00094V_0002ENSMUSG00000023809ENSMUST00000024575ENSMUSG00000056133ENSMUST00000070059ENSMUSG00000071322ENSMUST00000095726ENSMUST00000128533ENSMUST00000129709ENSMUST00000138222ENSMUST00000140192ENSMUST00000144861ENSMUST00000147803ENSMUSG00000079722ENSMUST00000115747ENSMUSG00000094369ENSMUST00000178099ENSMUSG00000094724ENSMUST00000089119ENSMUST00000179728ENSMUSG00000095720ENSMUST00000089120
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00094V_0001ENSG00000071242ENST00000265678ENST00000503859ENST00000507350ENST00000510118ENSG00000176381ENST00000322583ENSG00000198818ENST00000361731ENST00000478705ENST00000479490ENST00000487841ENST00000488773ENSG00000232082ENST00000416770ENSG00000233231ENST00000421336ENSG00000235008ENST00000454907ENSG00000235272ENST00000444122ENSG00000261420ENST00000568025ENSG00000280057ENST00000623222CIL_00094V_0002ENSMUSG00000023809ENSMUST00000024575ENSMUSG00000056133ENSMUST00000070059ENSMUSG00000071322ENSMUST00000095726ENSMUST00000128533ENSMUST00000129709ENSMUST00000138222ENSMUST00000140192ENSMUST00000144861ENSMUSG00000079722ENSMUST00000115747ENSMUSG00000094369ENSMUST00000178099ENSMUSG00000094724ENSMUST00000089119ENSMUST00000179728ENSMUSG00000095720ENSMUST00000089120
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071242 ENST00000265678 20.367±0.00 N/A 1.231±0.00 11.078±8.65 6.497±3.78 3.869±2.94 14.530±12.23 6.667±4.78 2.649±0.00 16.944±11.66 3.516±1.38 6.814±2.74 4.518±2.67 3.212±0.39
ENST00000366865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503859 N/A N/A N/A N/A N/A N/A N/A N/A 1.884±0.00 N/A N/A N/A N/A 1.766±0.00
ENST00000506565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.360±0.00 N/A N/A N/A
ENST00000507371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510118 N/A N/A N/A 3.308±0.00 N/A 0.905±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176381 ENST00000322583 0.058±0.00 0.019±0.00 N/A 19.916±17.45 0.104±0.00 0.017±0.00 0.018±0.00 0.907±0.00 0.456±0.00 0.139±0.13 N/A 0.219±0.19 0.023±0.00 0.167±0.06
ENST00000529616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198818 ENST00000361731 7.775±0.00 7.757±0.00 1.027±0.00 10.906±2.06 6.822±3.69 7.447±1.09 3.683±1.60 20.125±0.00 4.534±1.45 6.730±3.44 2.923±0.10 14.153±5.37 13.669±7.60 8.354±6.32
ENST00000478705 10.597±0.00 8.828±0.00 N/A 9.379±3.94 8.633±2.69 9.263±0.00 3.827±0.00 7.667±5.32 2.899±0.00 11.277±0.00 1.285±0.00 70.441±0.00 25.201±0.00 11.168±0.51
ENST00000479490 N/A 1.876±0.00 N/A N/A N/A 0.817±0.00 0.156±0.00 N/A N/A 0.503±0.00 0.187±0.00 2.177±0.16 N/A 0.955±0.00
ENST00000487841 N/A N/A N/A N/A N/A N/A N/A N/A 0.424±0.00 0.616±0.00 0.183±0.00 N/A N/A N/A
ENST00000488773 N/A N/A 2.960±0.00 N/A N/A 2.489±0.00 N/A N/A N/A N/A N/A N/A N/A 2.790±0.00
ENST00000494682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232082 ENST00000416770 0.101±0.00 0.505±0.00 N/A 0.329±0.00 0.115±0.00 0.069±0.00 0.482±0.35 N/A N/A 0.607±0.00 0.158±0.00 0.046±0.00 0.118±0.00 0.088±0.00
ENSG00000233231 ENST00000421336 0.198±0.00 N/A N/A 0.128±0.00 0.306±0.09 N/A 0.070±0.00 0.146±0.05 0.147±0.00 N/A N/A 0.230±0.17 N/A 0.066±0.00
ENSG00000235008 ENST00000454907 N/A N/A 0.028±0.00 0.038±0.00 0.160±0.00 N/A 0.028±0.01 N/A 0.131±0.00 0.093±0.00 N/A 0.501±0.00 N/A N/A
ENSG00000235272 ENST00000444122 N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A 2.418±2.37 N/A N/A N/A N/A
ENSG00000261420 ENST00000568025 0.181±0.00 0.478±0.00 0.160±0.00 0.428±0.07 0.183±0.00 0.192±0.00 0.078±0.05 0.651±0.00 0.164±0.00 0.042±0.00 0.052±0.00 0.272±0.19 N/A 0.592±0.19
ENSG00000280057 ENST00000623222 0.056±0.00 0.147±0.00 0.235±0.00 0.407±0.05 0.106±0.00 0.135±0.01 0.124±0.04 0.145±0.00 0.141±0.12 0.042±0.00 N/A 0.155±0.09 0.024±0.00 0.127±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023809 ENSMUST00000024575 3.900±1.04 6.180±1.64 2.371±0.04 10.605±1.83 2.674±0.85 2.368±1.02 6.923±4.71 2.083±0.95 0.813±0.42 10.232±1.66 31.417±0.00 21.169±3.62 5.910±2.13 4.676±1.64
ENSMUSG00000056133 ENSMUST00000070059 0.674±0.37 0.962±0.16 0.031±0.01 0.056±0.00 0.568±0.26 0.055±0.03 0.023±0.01 0.058±0.03 1.366±0.54 0.266±0.17 0.043±0.00 1.063±0.50 0.621±0.12 2.175±0.91
ENSMUSG00000071322 ENSMUST00000095726 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A 0.058±0.02 0.027±0.00 12.357±5.44
ENSMUST00000128533 N/A N/A 0.006±0.00 0.009±0.00 N/A N/A 0.027±0.01 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129709 N/A N/A 0.013±0.00 N/A N/A N/A 0.016±0.00 N/A N/A 0.026±0.00 N/A 0.086±0.01 N/A 22.446±3.62
ENSMUST00000138222 N/A 0.104±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 0.010±0.00 9.823±0.66
ENSMUST00000140192 N/A N/A 0.016±0.00 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A 30.260±22.26
ENSMUST00000144861 N/A N/A 0.022±0.00 0.032±0.00 N/A N/A 0.016±0.00 N/A 0.037±0.02 N/A N/A N/A N/A N/A
ENSMUST00000147803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079722 ENSMUST00000115747 0.197±0.09 0.205±0.20 0.027±0.00 0.155±0.05 0.256±0.11 0.044±0.00 0.031±0.01 0.037±0.01 0.107±0.12 0.130±0.11 0.058±0.04 0.765±0.31 0.702±0.42 6.031±1.86
ENSMUSG00000094369 ENSMUST00000178099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.998±0.00 N/A N/A
ENSMUSG00000094724 ENSMUST00000089119 17.021±9.88 91.674±15.67 42.216±24.24 9.184±4.61 19.410±13.86 39.514±20.46 11.749±3.42 45.289±27.44 20.603±13.10 22.738±0.45 N/A 29.225±25.97 5.318±5.37 6.341±1.56
ENSMUST00000179728 N/A N/A N/A 0.398±0.26 0.599±0.04 N/A 0.371±0.00 5.005±0.74 0.344±0.06 N/A 1.292±0.16 0.493±0.17 0.171±0.05 0.370±0.20
ENSMUSG00000095720 ENSMUST00000089120 N/A N/A N/A 0.115±0.03 N/A N/A N/A N/A 2.178±0.00 N/A N/A N/A N/A N/A

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