C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00096N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm270 VISTA 9606 10:21215719-21816526
GeneTranscriptPositionBiotype
ENSG00000078403 (MLLT10)
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 		ENST00000307729 (MLLT10-002) 21534343-21743630 protein_coding
ENST00000377059 (MLLT10-201) 21534645-21743626 protein_coding
ENST00000377072 (MLLT10-001) 21534173-21743630 protein_coding
ENST00000377091 (MLLT10-003) 21534345-21557025 protein_coding
ENST00000377100 (MLLT10-013) 21534165-21557182 protein_coding
ENST00000420525 (MLLT10-009) 21673578-21713922 protein_coding
ENST00000430455 (MLLT10-004) 21534749-21595378 protein_coding
ENST00000438473 (MLLT10-007) 21651754-21730944 protein_coding
ENST00000462999 (MLLT10-006) 21534749-21595384 processed_transcript
ENST00000468309 (MLLT10-014) 21668972-21671014 processed_transcript
ENST00000471315 (MLLT10-005) 21534468-21538964 processed_transcript
ENST00000476557 (MLLT10-012) 21534702-21595582 processed_transcript
ENST00000479634 (MLLT10-010) 21534749-21595384 processed_transcript
ENST00000480415 (MLLT10-008) 21534749-21595384 processed_transcript
ENST00000495130 (MLLT10-011) 21534490-21612451 processed_transcript
ENST00000621220 (MLLT10-202) 21534645-21556677 protein_coding
ENSG00000180592 (SKIDA1)
SKI/DACH domain containing 1 		ENST00000444772 (SKIDA1-201) 21515016-21517919 protein_coding
ENST00000449193 (SKIDA1-001) 21513478-21525682 protein_coding
ENST00000487107 (SKIDA1-002) 21519508-21523895 processed_transcript
ENSG00000204682 (CASC10)
cancer susceptibility candidate 10 		ENST00000377113 (CASC10-001) 21492658-21497262 protein_coding
ENSG00000207264 (RNU6-15P)
RNA, U6 small nuclear 15, pseudogene 		ENST00000384534 (RNU6-15P-201) 21321961-21322067 snRNA
ENSG00000223984 (HNRNPRP1)
heterogeneous nuclear ribonucleoprotein R pseudogene 1 		ENST00000453465 (HNRNPRP1-001) 21624592-21626286 processed_pseudogene
ENSG00000230109 (RP11-275N1.1)
 ENST00000433460 (RP11-275N1.1-001) 21340233-21372950 lincRNA
ENSG00000231553 (RNMTL1P1)
RNA methyltransferase like 1 pseudogene 1 		ENST00000454103 (RNMTL1P1-001) 21394033-21394592 processed_pseudogene
ENSG00000252634 (RN7SKP219)
RNA, 7SK small nuclear pseudogene 219 		ENST00000516825 (RN7SKP219-201) 21785292-21785587 misc_RNA
ENSG00000273566 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000616220 (Metazoa_SRP.1-237) 21455236-21455515 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_00096N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm270 VISTA 10090 2:17746233-18347055
GeneTranscriptPositionBiotype
ENSMUSG00000026740 (Dnajc1)
DnaJ (Hsp40) homolog, subfamily C, member 1 		ENSMUST00000028072 (Dnajc1-008) 18217135-18392642 nonsense_mediated_decay
ENSMUST00000091418 (Dnajc1-004) 18206333-18392811 protein_coding
ENSMUST00000148401 (Dnajc1-003) 18195654-18219557 protein_coding
ENSMUST00000153055 (Dnajc1-002) 18308585-18392824 processed_transcript
ENSMUST00000163130 (Dnajc1-006) 18217135-18392420 nonsense_mediated_decay
ENSMUST00000164606 (Dnajc1-007) 18306638-18310258 retained_intron
ENSMUST00000164835 (Dnajc1-011) 18219531-18307016 nonsense_mediated_decay
ENSMUST00000165793 (Dnajc1-010) 18316792-18392830 retained_intron
ENSMUST00000166495 (Dnajc1-001) 18213749-18392830 protein_coding
ENSMUST00000168723 (Dnajc1-005) 18217155-18392421 protein_coding
ENSMUST00000172210 (Dnajc1-009) 18209229-18216902 processed_transcript
ENSMUSG00000026743 (Mllt10)
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 		ENSMUST00000028076 (Mllt10-201) 18055237-18212387 protein_coding
ENSMUST00000114669 (Mllt10-003) 18126156-18212386 protein_coding
ENSMUST00000114671 (Mllt10-002) 18064636-18212388 protein_coding
ENSMUST00000114680 (Mllt10-001) 18064687-18210970 protein_coding
ENSMUST00000133649 (Mllt10-009) 18064805-18123812 processed_transcript
ENSMUST00000148229 (Mllt10-007) 18123709-18159590 processed_transcript
ENSMUST00000149786 (Mllt10-008) 18170251-18186857 processed_transcript
ENSMUST00000150422 (Mllt10-005) 18064394-18122348 processed_transcript
ENSMUST00000153279 (Mllt10-006) 18064834-18109891 processed_transcript
ENSMUST00000154041 (Mllt10-004) 18064684-18126229 processed_transcript
ENSMUST00000155352 (Mllt10-010) 18064841-18065255 processed_transcript
ENSMUSG00000054057 (A930004D18Rik)
RIKEN cDNA A930004D18 gene 		ENSMUST00000066163 (A930004D18Rik-001) 18025193-18037737 protein_coding
ENSMUST00000135980 (A930004D18Rik-002) 18027926-18028760 processed_transcript
ENSMUST00000151857 (A930004D18Rik-003) 18027974-18028871 processed_transcript
ENSMUSG00000054074 (Skida1)
SKI/DACH domain containing 1 		ENSMUST00000066885 (Skida1-201) 18045253-18048449 protein_coding
ENSMUST00000091420 (Skida1-001) 18044083-18049051 protein_coding
ENSMUST00000142856 (Skida1-003) 18047716-18048784 protein_coding
ENSMUST00000152908 (Skida1-002) 18048144-18049031 protein_coding
ENSMUST00000173604 (Skida1-004) 18040676-18044572 processed_transcript
ENSMUSG00000062651 (H2afb1)
H2A histone family, member B1 		ENSMUST00000105001 (H2afb1-001) 17996417-17996958 protein_coding
ENSMUSG00000064964 (Gm25147)
predicted gene, 25147 		ENSMUST00000083030 (Gm25147-201) 18158687-18158791 snRNA
ENSMUSG00000081619 (Gm13351)
predicted gene 13351 		ENSMUST00000118087 (Gm13351-001) 18179029-18179442 processed_pseudogene
ENSMUSG00000081851 (Gm13323)
predicted gene 13323 		ENSMUST00000120245 (Gm13323-001) 17796834-17797984 processed_pseudogene
ENSMUSG00000082520 (Gm13349)
predicted gene 13349 		ENSMUST00000118436 (Gm13349-001) 18338579-18338989 processed_pseudogene
ENSMUSG00000083070 (Gm13350)
predicted gene 13350 		ENSMUST00000120519 (Gm13350-001) 18249365-18249843 processed_pseudogene
ENSMUSG00000085319 (Gm13330)
predicted gene 13330 		ENSMUST00000136400 (Gm13330-001) 18032533-18039633 antisense
ENSMUSG00000086340 (1810059C17Rik)
RIKEN cDNA 1810059C17 gene 		ENSMUST00000125173 (1810059C17Rik-001) 18054193-18056613 processed_transcript
ENSMUSG00000092814 (Gm23638)
predicted gene, 23638 		ENSMUST00000175073 (Gm23638-201) 18129452-18129577 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096N_0001ENSG00000078403ENST00000307729ENST00000377059ENST00000377072ENST00000377091ENST00000377100ENST00000420525ENST00000430455ENST00000438473ENST00000462999ENST00000468309ENST00000471315ENST00000476557ENST00000479634ENST00000480415ENST00000495130ENST00000621220ENSG00000180592ENST00000444772ENST00000449193ENST00000487107ENSG00000204682ENST00000377113ENSG00000207264ENST00000384534ENSG00000223984ENST00000453465ENSG00000230109ENST00000433460ENSG00000231553ENST00000454103ENSG00000252634ENST00000516825ENSG00000273566ENST00000616220CIL_00096N_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096N_0001ENSG00000078403ENST00000307729ENST00000377059ENST00000377072ENST00000377100ENST00000438473ENST00000468309ENSG00000180592ENST00000444772ENST00000449193ENST00000487107ENSG00000204682ENST00000377113ENSG00000207264ENST00000384534ENSG00000223984ENST00000453465ENSG00000230109ENST00000433460ENSG00000231553ENST00000454103ENSG00000252634ENST00000516825ENSG00000273566ENST00000616220CIL_00096N_0002ENSMUSG00000026740ENSMUST00000028072ENSMUST00000091418ENSMUST00000153055ENSMUST00000164835ENSMUST00000165793ENSMUST00000166495ENSMUSG00000026743ENSMUST00000028076ENSMUST00000114669ENSMUST00000114671ENSMUST00000114680ENSMUSG00000054057ENSMUST00000066163ENSMUST00000135980ENSMUST00000151857ENSMUSG00000054074ENSMUST00000066885ENSMUST00000091420ENSMUST00000142856ENSMUST00000152908ENSMUST00000173604ENSMUSG00000062651ENSMUST00000105001ENSMUSG00000064964ENSMUST00000083030ENSMUSG00000081619ENSMUST00000118087ENSMUSG00000081851ENSMUST00000120245ENSMUSG00000082520ENSMUST00000118436ENSMUSG00000083070ENSMUST00000120519ENSMUSG00000085319ENSMUST00000136400ENSMUSG00000086340ENSMUST00000125173ENSMUSG00000092814ENSMUST00000175073
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078403 ENST00000307729 1.799±0.00 N/A N/A 1.640±0.00 1.738±0.00 0.326±0.00 N/A N/A N/A 0.634±0.00 0.718±0.00 2.400±0.00 N/A 8.016±0.00
ENST00000377059 N/A 2.386±0.00 3.813±0.00 N/A 4.422±0.00 0.981±0.00 1.813±1.01 1.502±0.05 2.022±0.83 1.425±0.51 0.520±0.09 4.619±1.24 2.893±0.53 24.239±18.04
ENST00000377072 N/A N/A N/A N/A N/A N/A N/A 0.740±0.00 N/A N/A N/A N/A N/A 2.458±0.00
ENST00000377091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.125±0.19 N/A
ENST00000420525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.017±0.00 N/A N/A N/A
ENST00000462999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.997±0.00 N/A N/A N/A
ENST00000471315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180592 ENST00000444772 N/A N/A 0.521±0.00 N/A 0.179±0.11 0.277±0.15 0.158±0.07 0.303±0.04 0.143±0.00 0.044±0.00 0.075±0.02 0.724±0.00 0.747±0.51 1.130±0.56
ENST00000449193 N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A 0.037±0.01 N/A 0.041±0.00 0.105±0.00 0.297±0.00
ENST00000487107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.317±0.00 N/A 4.442±0.00
ENSG00000204682 ENST00000377113 0.395±0.00 0.482±0.00 0.532±0.00 0.952±0.16 0.594±0.47 0.684±0.00 0.179±0.05 2.132±1.11 0.326±0.19 0.319±0.16 0.076±0.00 0.687±0.51 2.598±0.95 0.845±0.35
ENSG00000207264 ENST00000384534 N/A N/A N/A 34.743±0.00 39.874±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223984 ENST00000453465 0.007±0.00 0.054±0.00 0.131±0.00 0.059±0.00 N/A 0.182±0.00 0.063±0.00 N/A N/A N/A 0.014±0.00 0.286±0.34 0.029±0.00 0.071±0.00
ENSG00000230109 ENST00000433460 0.220±0.00 0.388±0.00 N/A 0.166±0.00 0.160±0.00 0.255±0.00 0.070±0.00 0.196±0.00 N/A 0.257±0.00 N/A 0.385±0.00 0.086±0.00 0.142±0.04
ENSG00000231553 ENST00000454103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A
ENSG00000252634 ENST00000516825 0.048±0.00 N/A N/A N/A 0.530±0.00 N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A 0.128±0.00
ENSG00000273566 ENST00000616220 0.213±0.00 1.279±0.00 N/A 1.305±0.00 0.323±0.00 0.580±0.00 0.503±0.00 1.416±0.00 0.137±0.00 0.151±0.00 0.472±0.00 1.088±0.00 N/A 0.702±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026740 ENSMUST00000028072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.384±0.00 36.319±9.07 N/A
ENSMUST00000091418 5.922±0.05 8.388±1.22 3.518±0.27 4.891±2.71 5.415±1.35 6.014±0.13 N/A 3.830±0.31 3.231±0.79 6.524±1.20 0.875±0.14 6.929±1.85 3.556±1.14 8.025±3.60
ENSMUST00000148401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153055 N/A 15.722±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.059±0.00 N/A N/A
ENSMUST00000163130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164835 N/A N/A N/A 21.014±0.00 N/A N/A N/A N/A N/A N/A N/A 38.776±0.00 61.464±6.10 N/A
ENSMUST00000165793 N/A 22.290±5.30 N/A N/A 10.782±0.52 7.412±0.42 N/A N/A N/A 12.384±0.00 N/A 14.492±2.23 N/A N/A
ENSMUST00000166495 6.252±3.10 8.090±1.25 6.840±0.30 5.150±1.79 5.852±0.30 4.523±0.43 3.522±0.36 4.776±0.57 3.329±1.08 7.476±1.17 1.967±0.34 8.093±2.14 4.127±1.06 N/A
ENSMUST00000168723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026743 ENSMUST00000028076 1.623±0.00 N/A 2.485±0.27 N/A 3.505±0.00 N/A N/A 2.553±0.00 3.058±0.64 N/A 1.292±0.32 4.962±1.37 5.250±3.29 9.446±1.45
ENSMUST00000114669 3.826±0.19 4.479±0.52 3.368±0.46 7.089±2.25 4.764±0.84 4.913±2.06 2.530±0.42 4.550±1.25 3.397±1.09 4.522±1.16 1.029±0.01 6.298±1.84 3.810±1.32 15.747±1.51
ENSMUST00000114671 2.752±0.22 N/A 2.404±0.06 6.915±3.73 N/A 1.950±0.00 N/A 1.882±0.23 2.638±1.35 2.997±0.45 1.432±0.21 2.757±0.00 3.458±0.37 10.044±1.73
ENSMUST00000114680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.652±0.00
ENSMUST00000133649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054057 ENSMUST00000066163 N/A N/A 1.025±0.27 1.975±0.00 0.410±0.09 0.350±0.00 N/A N/A 0.243±0.11 0.496±0.02 0.117±0.00 0.650±0.00 0.313±0.00 0.064±0.03
ENSMUST00000135980 N/A N/A N/A N/A N/A 0.479±0.00 N/A N/A N/A N/A 0.804±0.44 N/A N/A 0.117±0.00
ENSMUST00000151857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.292±0.26 N/A N/A
ENSMUSG00000054074 ENSMUST00000066885 0.919±0.43 0.355±0.07 1.045±0.27 3.121±1.38 0.568±0.24 0.262±0.07 0.391±0.00 0.937±0.19 0.182±0.09 0.663±0.20 0.051±0.02 0.859±0.30 0.189±0.08 0.076±0.06
ENSMUST00000091420 0.267±0.11 1.156±0.44 1.588±0.27 8.395±2.66 0.311±0.21 0.319±0.13 0.140±0.00 0.691±0.13 0.210±0.13 1.104±0.18 0.065±0.01 0.877±0.35 0.535±0.22 0.032±0.00
ENSMUST00000142856 N/A 1.971±0.99 N/A N/A 1.187±0.04 N/A N/A N/A N/A 1.417±0.00 N/A N/A N/A 0.081±0.00
ENSMUST00000152908 N/A N/A N/A N/A 4.797±0.00 N/A 2.632±0.00 N/A N/A N/A 0.212±0.00 N/A N/A 0.286±0.13
ENSMUST00000173604 N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000062651 ENSMUST00000105001 N/A N/A 0.020±0.00 0.038±0.02 0.082±0.00 N/A 0.216±0.07 0.173±0.06 N/A 0.091±0.00 N/A 0.123±0.00 N/A 233.787±99.00
ENSMUSG00000064964 ENSMUST00000083030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.028±0.00
ENSMUSG00000081619 ENSMUST00000118087 N/A 0.254±0.02 1.281±0.00 0.703±0.59 1.023±0.62 0.401±0.11 N/A 1.082±0.00 0.560±0.22 N/A 0.169±0.02 0.755±0.35 0.773±0.54 1.373±0.55
ENSMUSG00000081851 ENSMUST00000120245 0.031±0.00 0.083±0.00 N/A 0.030±0.00 0.053±0.02 0.085±0.03 0.030±0.00 N/A 0.044±0.00 0.050±0.00 N/A 0.219±0.00 N/A 0.049±0.02
ENSMUSG00000082520 ENSMUST00000118436 N/A N/A 0.217±0.18 0.214±0.02 N/A N/A N/A 0.306±0.05 0.133±0.10 0.159±0.00 N/A 0.134±0.00 0.253±0.06 N/A
ENSMUSG00000083070 ENSMUST00000120519 N/A N/A 0.059±0.03 0.067±0.00 N/A N/A 0.143±0.00 N/A 0.030±0.02 N/A N/A 0.068±0.00 0.050±0.02 N/A
ENSMUSG00000085319 ENSMUST00000136400 N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A
ENSMUSG00000086340 ENSMUST00000125173 0.130±0.02 N/A 0.104±0.03 0.113±0.02 0.336±0.00 N/A N/A N/A 0.040±0.02 0.271±0.00 0.130±0.01 0.199±0.14 0.049±0.00 0.159±0.06
ENSMUSG00000092814 ENSMUST00000175073 N/A N/A 19.205±0.00 N/A N/A N/A N/A 823.650±0.00 206.039±0.00 542.565±0.00 N/A N/A N/A N/A

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