C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00096Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm635 VISTA 9606 17:71819013-72419857
GeneTranscriptPositionBiotype
ENSG00000125398 (SOX9)
SRY (sex determining region Y)-box 9 		ENST00000245479 (SOX9-001) 72121020-72126420 protein_coding
ENSG00000226101 (AC007461.2)
 ENST00000419257 (AC007461.2-001) 72072333-72093481 lincRNA
ENSG00000227036 (LINC00511)
long intergenic non-protein coding RNA 511 		ENST00000453722 (LINC00511-002) 72384302-72592804 lincRNA
ENST00000457958 (LINC00511-009) 72403322-72592340 lincRNA
ENST00000577773 (LINC00511-012) 72421829-72423070 lincRNA
ENST00000577828 (LINC00511-007) 72404639-72431159 lincRNA
ENST00000578206 (LINC00511-011) 72404151-72423026 lincRNA
ENST00000579631 (LINC00511-015) 72323123-72325949 lincRNA
ENST00000580175 (LINC00511-004) 72428268-72470366 lincRNA
ENST00000580199 (LINC00511-017) 72323145-72325932 lincRNA
ENST00000580500 (LINC00511-005) 72404522-72445119 lincRNA
ENST00000580861 (LINC00511-003) 72431164-72603508 lincRNA
ENST00000580948 (LINC00511-010) 72404660-72421224 lincRNA
ENST00000581183 (LINC00511-016) 72324063-72339567 lincRNA
ENST00000581549 (LINC00511-018) 72598041-72640472 lincRNA
ENST00000581801 (LINC00511-014) 72323158-72592355 lincRNA
ENST00000582712 (LINC00511-008) 72420980-72428289 lincRNA
ENST00000583460 (LINC00511-013) 72382955-72385123 lincRNA
ENST00000584749 (LINC00511-006) 72427972-72431191 lincRNA
ENSG00000228639 (AC005152.3)
 ENST00000430908 (AC005152.3-001) 72021851-72025962 lincRNA
ENST00000543512 (AC005152.3-002) 72021851-72034092 lincRNA
ENSG00000256124 (LINC01152)
long intergenic non-protein coding RNA 1152 		ENST00000472655 (LINC01152-003) 72030654-72041297 lincRNA
ENST00000538693 (LINC01152-001) 72030291-72036316 lincRNA
ENST00000538810 (LINC01152-002) 72030654-72038748 lincRNA
ENSG00000264026 (RP11-1124B17.1)
 ENST00000577573 (RP11-1124B17.1-001) 72342940-72355136 lincRNA
CIL_00096Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm635 VISTA 10090 11:112480251-113081039
GeneTranscriptPositionBiotype
ENSMUSG00000000567 (Sox9)
SRY (sex determining region Y)-box 9 		ENSMUST00000000579 (Sox9-001) 112782224-112787760 protein_coding
ENSMUSG00000020624 (4933434M16Rik)
RIKEN cDNA 4933434M16 gene 		ENSMUST00000149136 (4933434M16Rik-001) 112825154-112826210 lincRNA
ENSMUST00000153429 (4933434M16Rik-002) 112825179-112832469 lincRNA
ENSMUSG00000041674 (BC006965)
cDNA sequence BC006965 		ENSMUST00000124028 (BC006965-001) 112663927-112711356 processed_transcript
ENSMUST00000125873 (BC006965-011) 112677290-112691359 processed_transcript
ENSMUST00000131057 (BC006965-002) 112687643-112711341 processed_transcript
ENSMUST00000133231 (BC006965-014) 112669201-112677220 processed_transcript
ENSMUST00000137081 (BC006965-004) 112687645-112781976 processed_transcript
ENSMUST00000139027 (BC006965-005) 112691324-112711339 processed_transcript
ENSMUST00000141399 (BC006965-017) 112664839-112669398 processed_transcript
ENSMUST00000142282 (BC006965-016) 112670187-112672210 processed_transcript
ENSMUST00000142413 (BC006965-008) 112684575-112711363 processed_transcript
ENSMUST00000143060 (BC006965-007) 112684682-112711356 processed_transcript
ENSMUST00000143550 (BC006965-015) 112664815-112672210 processed_transcript
ENSMUST00000143760 (BC006965-009) 112672174-112711340 processed_transcript
ENSMUST00000144036 (BC006965-006) 112684464-112691518 processed_transcript
ENSMUST00000148724 (BC006965-018) 112718876-112744277 processed_transcript
ENSMUST00000151650 (BC006965-013) 112677406-112711362 processed_transcript
ENSMUST00000154379 (BC006965-012) 112672087-112710922 processed_transcript
ENSMUST00000155766 (BC006965-003) 112687643-112711341 processed_transcript
ENSMUST00000156388 (BC006965-010) 112677481-112711340 processed_transcript
ENSMUSG00000075437 (Gm11681)
predicted gene 11681 		ENSMUST00000127337 (Gm11681-001) 112792731-112799008 lincRNA
ENSMUSG00000087259 (2610035D17Rik)
RIKEN cDNA 2610035D17 gene 		ENSMUST00000127263 (2610035D17Rik-003) 113043895-113201838 lincRNA
ENSMUST00000136438 (2610035D17Rik-002) 113043895-113173077 lincRNA
ENSMUST00000145206 (2610035D17Rik-004) 113043895-113201822 lincRNA
ENSMUST00000150712 (2610035D17Rik-001) 113044517-113173077 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096Y_0001ENSG00000125398ENST00000245479ENSG00000226101ENST00000419257ENSG00000227036ENST00000453722ENST00000457958ENST00000577773ENST00000577828ENST00000578206ENST00000579631ENST00000580175ENST00000580199ENST00000580500ENST00000580861ENST00000580948ENST00000581183ENST00000581549ENST00000581801ENST00000582712ENST00000583460ENST00000584749ENSG00000228639ENST00000430908ENST00000543512ENSG00000256124ENST00000472655ENST00000538693ENST00000538810ENSG00000264026ENST00000577573CIL_00096Y_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096Y_0001ENSG00000125398ENST00000245479ENSG00000226101ENST00000419257ENSG00000227036ENST00000453722ENST00000457958ENST00000578206ENST00000580175ENST00000580500ENST00000581549ENST00000581801ENSG00000228639ENST00000430908ENST00000543512ENSG00000256124ENST00000472655ENSG00000264026ENST00000577573CIL_00096Y_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125398 ENST00000245479 2.133±0.00 1.908±0.00 1.340±0.00 17.647±13.55 7.871±4.24 3.370±0.14 4.012±3.28 6.601±6.44 0.574±0.18 1.162±0.71 0.518±0.06 18.778±19.47 0.591±0.19 19.433±0.10
ENSG00000226101 ENST00000419257 N/A N/A N/A N/A N/A 0.105±0.00 N/A 0.206±0.00 N/A 0.035±0.00 N/A N/A N/A 0.336±0.05
ENSG00000227036 ENST00000453722 0.388±0.00 0.744±0.00 N/A 1.684±0.00 0.347±0.00 0.701±0.00 0.125±0.00 0.616±0.00 N/A 1.270±0.00 0.103±0.00 N/A 0.141±0.07 0.945±0.00
ENST00000457958 0.156±0.00 N/A N/A 1.993±1.69 0.459±0.00 1.587±1.32 N/A N/A 1.946±0.00 0.564±0.00 N/A 1.597±1.19 0.330±0.20 0.794±0.28
ENST00000577773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578206 N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A
ENST00000579631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580175 N/A N/A N/A 1.469±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580500 N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000580861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581549 N/A 0.091±0.00 N/A N/A N/A 0.122±0.00 N/A 0.048±0.00 N/A N/A N/A 0.950±0.71 N/A 0.839±0.60
ENST00000581801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.00 N/A
ENST00000582712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228639 ENST00000430908 N/A N/A N/A N/A 1.375±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.270±0.00
ENST00000543512 N/A N/A N/A N/A 1.022±0.00 N/A N/A 1.889±0.00 0.264±0.00 N/A N/A N/A N/A 0.074±0.00
ENSG00000256124 ENST00000472655 0.012±0.00 0.115±0.00 0.107±0.00 0.330±0.23 0.397±0.23 0.074±0.00 N/A 0.071±0.00 0.032±0.00 0.013±0.00 N/A 0.044±0.02 0.009±0.00 0.470±0.06
ENST00000538693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264026 ENST00000577573 N/A N/A N/A 0.060±0.05 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000567 ENSMUST00000000579 1.629±1.06 1.371±0.29 0.496±0.01 7.823±3.74 8.952±3.96 33.712±2.54 1.010±0.35 0.386±0.06 0.848±0.43 0.570±0.11 0.389±0.13 5.315±2.41 0.670±0.21 2.864±1.29
ENSMUSG00000020624 ENSMUST00000149136 N/A N/A 0.025±0.00 0.004±0.00 N/A 0.114±0.07 0.038±0.00 0.047±0.00 N/A N/A N/A 0.029±0.01 N/A 17.943±6.19
ENSMUST00000153429 N/A N/A N/A 0.021±0.01 N/A 0.064±0.02 N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A
ENSMUSG00000041674 ENSMUST00000124028 0.036±0.01 N/A 0.015±0.00 N/A 1.139±0.29 0.082±0.03 0.016±0.00 0.023±0.01 0.024±0.01 0.033±0.00 0.027±0.01 0.058±0.03 0.007±0.00 0.043±0.00
ENSMUST00000125873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 0.112±0.00 N/A 0.066±0.01
ENSMUST00000131057 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.01 N/A 0.046±0.00 N/A N/A 0.069±0.00
ENSMUST00000133231 N/A N/A 0.031±0.00 N/A N/A 0.229±0.00 N/A N/A N/A 0.063±0.00 0.054±0.02 N/A 0.052±0.00 0.111±0.00
ENSMUST00000137081 0.079±0.00 N/A 0.018±0.00 N/A N/A 0.150±0.00 0.042±0.02 N/A 0.078±0.03 N/A 0.083±0.06 N/A 0.011±0.00 0.141±0.05
ENSMUST00000139027 N/A N/A N/A N/A 1.630±0.00 0.270±0.15 N/A N/A 0.036±0.00 N/A 0.050±0.00 0.615±0.00 0.085±0.00 0.212±0.13
ENSMUST00000141399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 0.661±0.00 0.159±0.13 1.299±0.00
ENSMUST00000142282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143060 N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143760 N/A N/A N/A 0.203±0.00 N/A 0.212±0.10 N/A 0.062±0.02 0.035±0.00 N/A 0.100±0.05 0.054±0.00 N/A 0.194±0.12
ENSMUST00000144036 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A 0.072±0.00 N/A
ENSMUST00000148724 N/A N/A N/A N/A N/A N/A 0.077±0.00 0.226±0.00 N/A N/A N/A 0.345±0.25 N/A N/A
ENSMUST00000151650 N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.091±0.00 0.185±0.00
ENSMUST00000155766 N/A N/A 0.027±0.00 N/A N/A N/A N/A 0.034±0.00 0.011±0.00 N/A 0.034±0.00 0.032±0.00 N/A N/A
ENSMUST00000156388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A
ENSMUSG00000075437 ENSMUST00000127337 0.042±0.00 N/A N/A 0.239±0.17 N/A 0.186±0.00 N/A 0.045±0.00 0.017±0.01 N/A N/A 0.024±0.00 N/A 0.545±0.16
ENSMUSG00000087259 ENSMUST00000127263 0.860±0.57 N/A 6.264±1.66 3.499±2.28 0.659±0.28 3.182±1.33 0.207±0.00 0.509±0.00 0.116±0.00 0.237±0.01 N/A 1.738±0.75 N/A 0.994±0.26
ENSMUST00000136438 1.517±0.67 3.452±0.51 4.899±0.82 1.492±0.40 3.154±1.37 3.208±0.62 3.032±1.65 4.484±0.95 0.549±0.43 1.720±0.36 3.353±0.81 2.122±0.76 1.457±1.17 2.383±0.48
ENSMUST00000145206 0.568±0.00 N/A N/A 1.033±0.00 0.647±0.00 1.477±0.00 N/A 0.558±0.02 0.083±0.01 0.317±0.14 N/A 1.149±0.77 N/A 0.383±0.11
ENSMUST00000150712 N/A 0.978±0.00 N/A N/A 0.656±0.00 N/A N/A N/A 0.193±0.15 N/A N/A 1.557±0.61 0.264±0.00 N/A

Loading