C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00097H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs918 VISTA 9606 4:107841068-108442627
GeneTranscriptPositionBiotype
ENSG00000138795 (LEF1)
lymphoid enhancer-binding factor 1 		ENST00000265165 (LEF1-001) 108047545-108168422 protein_coding
ENST00000379951 (LEF1-201) 108047545-108168956 protein_coding
ENST00000438313 (LEF1-020) 108048417-108167798 protein_coding
ENST00000503879 (LEF1-017) 108047573-108078352 processed_transcript
ENST00000504426 (LEF1-013) 108047592-108071778 processed_transcript
ENST00000504775 (LEF1-008) 108070662-108167594 processed_transcript
ENST00000504950 (LEF1-007) 108078325-108166286 nonsense_mediated_decay
ENST00000505293 (LEF1-002) 108083368-108166796 processed_transcript
ENST00000505297 (LEF1-011) 108048354-108072896 processed_transcript
ENST00000505328 (LEF1-015) 108070430-108078405 retained_intron
ENST00000505379 (LEF1-010) 108048169-108083413 processed_transcript
ENST00000506680 (LEF1-019) 108063629-108167767 nonsense_mediated_decay
ENST00000507470 (LEF1-016) 108048527-108070895 retained_intron
ENST00000509428 (LEF1-009) 108048597-108165195 processed_transcript
ENST00000510135 (LEF1-005) 108048377-108165255 processed_transcript
ENST00000510624 (LEF1-018) 108048639-108166721 protein_coding
ENST00000510717 (LEF1-004) 108081621-108165257 processed_transcript
ENST00000512172 (LEF1-006) 108083213-108166301 protein_coding
ENST00000512407 (LEF1-014) 108048635-108072251 processed_transcript
ENST00000514444 (LEF1-012) 108048300-108078382 processed_transcript
ENST00000515500 (LEF1-003) 108081584-108166797 protein_coding
ENSG00000138796 (HADH)
hydroxyacyl-CoA dehydrogenase 		ENST00000309522 (HADH-001) 107989784-108035175 protein_coding
ENST00000403312 (HADH-002) 107989714-108035175 protein_coding
ENST00000505878 (HADH-003) 107989902-108035171 protein_coding
ENST00000507260 (HADH-009) 108014470-108027934 retained_intron
ENST00000510728 (HADH-006) 108027512-108034492 processed_transcript
ENST00000511742 (HADH-004) 107989855-108005334 nonsense_mediated_decay
ENST00000514776 (HADH-007) 108033000-108034492 retained_intron
ENST00000515462 (HADH-008) 108027715-108034492 retained_intron
ENST00000603302 (HADH-201) 107989714-108035174 protein_coding
ENSG00000155016 (CYP2U1)
cytochrome P450, family 2, subfamily U, polypeptide 1 		ENST00000332884 (CYP2U1-001) 107931369-107953457 protein_coding
ENST00000508453 (CYP2U1-003) 107931596-107951667 protein_coding
ENST00000513302 (CYP2U1-002) 107931585-107936607 processed_transcript
ENSG00000164023 (SGMS2)
sphingomyelin synthase 2 		ENST00000359079 (SGMS2-002) 107893238-107910953 protein_coding
ENST00000394684 (SGMS2-001) 107824563-107915047 protein_coding
ENST00000394686 (SGMS2-003) 107893274-107910953 protein_coding
ENST00000503385 (SGMS2-010) 107894248-107895687 protein_coding
ENST00000503862 (SGMS2-006) 107825208-107908731 protein_coding
ENST00000504754 (SGMS2-011) 107907200-107908227 processed_transcript
ENST00000506462 (SGMS2-007) 107824563-107895547 processed_transcript
ENST00000506993 (SGMS2-009) 107893256-107895657 protein_coding
ENST00000515332 (SGMS2-008) 107824882-107895353 processed_transcript
ENSG00000222691 (RNU6-733P)
RNA, U6 small nuclear 733, pseudogene 		ENST00000410759 (RNU6-733P-201) 107867807-107867910 snRNA
ENSG00000232021 (LEF1-AS1)
LEF1 antisense RNA 1 		ENST00000436413 (LEF1-AS1-001) 108167525-108176426 antisense
ENST00000506314 (LEF1-AS1-003) 108172709-108176428 retained_intron
ENST00000507799 (LEF1-AS1-005) 108172699-108199920 antisense
ENST00000508266 (LEF1-AS1-004) 108171771-108173768 antisense
ENST00000508286 (LEF1-AS1-007) 108173419-108176430 antisense
ENST00000512129 (LEF1-AS1-006) 108176288-108256836 antisense
ENST00000512637 (LEF1-AS1-002) 108172120-108176426 antisense
ENSG00000239939 (RPSAP34)
ribosomal protein SA pseudogene 34 		ENST00000476193 (RPSAP34-001) 108407843-108408578 processed_pseudogene
ENSG00000245293 (RP11-286E11.1)
 ENST00000499098 (RP11-286E11.1-001) 107863479-107932119 antisense
ENST00000513071 (RP11-286E11.1-002) 107886717-107978799 antisense
CIL_00097H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs918 VISTA 10090 3:130836337-131437858
GeneTranscriptPositionBiotype
ENSMUSG00000027983 (Cyp2u1)
cytochrome P450, family 2, subfamily u, polypeptide 1 		ENSMUST00000106337 (Cyp2u1-201) 131290491-131303227 protein_coding
ENSMUSG00000027984 (Hadh)
hydroxyacyl-Coenzyme A dehydrogenase 		ENSMUST00000029610 (Hadh-001) 131233419-131272101 protein_coding
ENSMUST00000152427 (Hadh-002) 131245101-131272024 retained_intron
ENSMUSG00000027985 (Lef1)
lymphoid enhancer binding factor 1 		ENSMUST00000029611 (Lef1-001) 131110471-131224356 protein_coding
ENSMUST00000066849 (Lef1-006) 131110471-131224356 protein_coding
ENSMUST00000098611 (Lef1-002) 131112797-131224356 protein_coding
ENSMUST00000106341 (Lef1-004) 131110471-131224356 protein_coding
ENSMUST00000132737 (Lef1-005) 131112806-131188082 retained_intron
ENSMUST00000136147 (Lef1-003) 131112797-131117387 retained_intron
ENSMUSG00000050931 (Sgms2)
sphingomyelin synthase 2 		ENSMUST00000090246 (Sgms2-001) 131318985-131344933 protein_coding
ENSMUST00000126569 (Sgms2-002) 131342110-131344940 protein_coding
ENSMUSG00000097761 (4930534D22Rik)
RIKEN cDNA 4930534D22 gene 		ENSMUST00000181438 (4930534D22Rik-201) 131302643-131316661 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138795 ENST00000265165 N/A N/A N/A N/A 2.000±0.00 N/A 0.025±0.00 0.246±0.00 0.384±0.00 N/A N/A 0.817±0.15 1.055±0.50 N/A
ENST00000379951 0.232±0.00 2.314±0.00 0.134±0.00 0.513±0.00 N/A 0.254±0.01 N/A 0.468±0.00 N/A 1.161±0.36 N/A 0.817±0.48 0.796±0.00 14.285±0.00
ENST00000438313 N/A N/A N/A 1.268±0.00 N/A 0.698±0.00 N/A N/A N/A 1.991±0.00 N/A 1.040±0.00 2.212±0.00 N/A
ENST00000503879 N/A N/A N/A N/A 2.193±0.00 0.548±0.00 N/A 0.995±0.00 N/A N/A N/A N/A N/A N/A
ENST00000504426 N/A 3.816±0.00 0.442±0.00 N/A N/A N/A 0.084±0.00 N/A 0.019±0.00 1.160±0.27 N/A N/A N/A N/A
ENST00000504775 N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A 1.512±0.00 N/A N/A
ENST00000504950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505293 N/A N/A N/A 2.551±0.00 N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000505297 N/A N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505379 N/A N/A N/A 0.952±0.00 N/A 0.396±0.00 N/A N/A 0.576±0.00 N/A N/A 2.271±0.00 1.373±0.00 N/A
ENST00000506680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507470 N/A N/A N/A N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.788±0.00 N/A
ENST00000510624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.418±0.00 N/A N/A N/A
ENST00000515500 N/A N/A N/A N/A N/A N/A N/A N/A 0.977±0.00 N/A N/A 1.045±0.00 N/A N/A
ENSG00000138796 ENST00000309522 31.771±0.00 10.639±0.00 5.122±0.00 5.882±3.83 29.360±24.12 21.515±4.73 42.107±32.10 25.277±6.73 22.822±19.18 7.614±4.79 22.982±9.95 21.855±10.86 17.754±8.85 36.761±13.84
ENST00000403312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505878 N/A N/A 1.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507260 N/A N/A 3.434±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155016 ENST00000332884 3.139±0.00 4.064±0.00 0.614±0.00 1.245±0.25 2.435±0.93 2.210±0.46 1.446±0.34 2.106±0.60 1.599±0.33 1.666±0.50 0.831±0.00 1.904±1.31 1.315±0.08 4.382±2.61
ENST00000508453 N/A N/A N/A 1.448±0.00 N/A N/A N/A N/A 2.307±0.00 N/A 0.336±0.00 N/A N/A N/A
ENST00000513302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164023 ENST00000359079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.070±0.00
ENST00000394684 1.176±0.00 1.227±0.00 0.711±0.00 N/A 2.959±0.91 2.675±0.15 1.290±0.22 3.293±0.00 2.475±0.00 4.119±0.03 N/A 1.099±0.43 2.014±0.64 2.259±0.00
ENST00000394686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504754 0.110±0.00 0.208±0.00 N/A N/A 0.327±0.00 0.450±0.00 N/A 0.051±0.00 N/A 0.110±0.00 N/A 0.124±0.07 N/A 0.115±0.09
ENST00000506462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222691 ENST00000410759 N/A N/A N/A N/A 1.228±0.00 N/A N/A 0.750±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000232021 ENST00000436413 N/A N/A N/A 0.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.328±0.00
ENST00000506314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A
ENST00000507799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239939 ENST00000476193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00
ENSG00000245293 ENST00000499098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.966±0.00
ENST00000513071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027983 ENSMUST00000106337 0.668±0.09 1.262±0.29 0.553±0.00 2.663±0.00 0.920±0.16 0.187±0.06 N/A 1.973±0.00 0.060±0.02 0.403±0.03 0.378±0.12 0.298±0.07 0.117±0.11 0.764±0.36
ENSMUSG00000027984 ENSMUST00000029610 165.438±50.47 190.683±61.09 51.721±4.20 9.702±2.81 137.066±45.15 125.644±34.29 308.183±20.41 266.211±10.16 178.801±83.42 60.211±8.76 77.526±11.03 74.494±17.71 79.084±25.52 16.010±7.08
ENSMUST00000152427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027985 ENSMUST00000029611 1.475±1.66 N/A 0.938±0.18 N/A 4.277±2.46 0.545±0.17 0.059±0.02 0.395±0.25 0.206±0.27 1.090±0.37 0.141±0.09 0.433±0.20 0.169±0.10 N/A
ENSMUST00000066849 0.731±0.00 N/A N/A 4.187±0.36 N/A N/A N/A 0.072±0.00 0.052±0.00 N/A 0.098±0.00 0.202±0.04 0.059±0.04 N/A
ENSMUST00000098611 1.391±1.31 4.032±1.60 0.353±0.11 0.308±0.00 15.587±7.72 0.270±0.05 0.354±0.21 1.014±0.68 0.277±0.32 2.468±0.69 0.221±0.24 0.721±0.60 0.077±0.04 9.744±3.80
ENSMUST00000106341 N/A N/A N/A 5.716±0.67 N/A N/A N/A 0.117±0.00 0.038±0.00 N/A 0.042±0.01 0.281±0.12 0.018±0.00 3.072±0.06
ENSMUST00000132737 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A 0.012±0.00 N/A
ENSMUST00000136147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050931 ENSMUST00000090246 3.127±0.00 0.741±0.30 N/A 0.137±0.00 2.411±0.72 5.816±2.37 0.442±0.12 12.900±0.51 3.442±2.92 1.974±0.17 0.160±0.01 5.366±2.45 N/A 5.079±1.65
ENSMUST00000126569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.618±1.75
ENSMUSG00000097761 ENSMUST00000181438 1.005±0.57 5.493±0.80 0.176±0.04 0.367±0.00 2.386±0.81 0.636±0.10 1.043±0.44 1.207±0.46 1.334±1.60 0.674±0.06 N/A 1.527±0.90 0.045±0.01 0.517±0.34

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