C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00099K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm82 VISTA 9606 2:30059340-30663789
GeneTranscriptPositionBiotype
ENSG00000119801 (YPEL5)
yippee-like 5 (Drosophila) 		ENST00000261353 (YPEL5-001) 30146961-30160533 protein_coding
ENST00000379519 (YPEL5-003) 30146941-30160533 protein_coding
ENST00000379520 (YPEL5-002) 30146941-30160533 protein_coding
ENST00000402003 (YPEL5-004) 30147007-30160533 protein_coding
ENST00000402708 (YPEL5-006) 30147516-30159551 protein_coding
ENST00000470120 (YPEL5-009) 30147952-30158966 processed_transcript
ENST00000482474 (YPEL5-011) 30147561-30148334 processed_transcript
ENST00000490211 (YPEL5-008) 30146963-30156787 processed_transcript
ENST00000492439 (YPEL5-010) 30147957-30158747 processed_transcript
ENST00000495673 (YPEL5-013) 30156378-30159138 processed_transcript
ENSG00000172954 (LCLAT1)
lysocardiolipin acyltransferase 1 		ENST00000309052 (LCLAT1-001) 30447257-30644225 protein_coding
ENST00000319406 (LCLAT1-002) 30447243-30607845 protein_coding
ENST00000379509 (LCLAT1-006) 30447236-30644224 protein_coding
ENST00000465200 (LCLAT1-011) 30447236-30562190 protein_coding
ENST00000465538 (LCLAT1-012) 30447256-30533319 protein_coding
ENST00000466477 (LCLAT1-010) 30447226-30552549 protein_coding
ENST00000476038 (LCLAT1-013) 30447276-30568167 protein_coding
ENST00000476535 (LCLAT1-004) 30447403-30562193 protein_coding
ENST00000478015 (LCLAT1-008) 30447273-30640830 nonsense_mediated_decay
ENST00000488144 (LCLAT1-005) 30447249-30533266 protein_coding
ENST00000491680 (LCLAT1-007) 30447246-30640947 processed_transcript
ENST00000497423 (LCLAT1-003) 30447388-30533297 protein_coding
ENSG00000213626 (LBH)
limb bud and heart development 		ENST00000395323 (LBH-001) 30231531-30260028 protein_coding
ENST00000401506 (LBH-007) 30232153-30257760 protein_coding
ENST00000404397 (LBH-006) 30231537-30323730 protein_coding
ENST00000406087 (LBH-003) 30231537-30257656 protein_coding
ENST00000407930 (LBH-008) 30232180-30257670 protein_coding
ENST00000412933 (LBH-004) 30231536-30257548 nonsense_mediated_decay
ENST00000464412 (LBH-005) 30231537-30256701 processed_transcript
ENST00000467242 (LBH-002) 30232157-30258040 processed_transcript
ENST00000484150 (LBH-009) 30234266-30257700 processed_transcript
ENSG00000221377 (AC073255.1)
 ENST00000408450 (AC073255.1-201) 30432353-30432448 miRNA
ENSG00000233862 (AC016907.3)
 ENST00000420016 (AC016907.3-002) 30111175-30136333 antisense
ENST00000453606 (AC016907.3-001) 30051066-30140666 antisense
ENST00000455424 (AC016907.3-003) 30132345-30143804 antisense
ENSG00000235997 (AC109642.1)
 ENST00000421976 (AC109642.1-002) 30346659-30352431 lincRNA
ENSG00000280154 (RP11-182E7.1)
 ENST00000624149 (RP11-182E7.1-001) 30408170-30408346 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_00099K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm82 VISTA 10090 17:72722163-73324151
GeneTranscriptPositionBiotype
ENSMUSG00000024063 (Lbh)
limb-bud and heart 		ENSMUST00000024857 (Lbh-001) 72918305-72941942 protein_coding
ENSMUST00000148556 (Lbh-002) 72921188-72939345 nonsense_mediated_decay
ENSMUSG00000039770 (Ypel5)
yippee-like 5 (Drosophila) 		ENSMUST00000045174 (Ypel5-201) 72836704-72851195 protein_coding
ENSMUSG00000043705 (Capn13)
calpain 13 		ENSMUST00000095208 (Capn13-201) 73306464-73399296 protein_coding
ENSMUSG00000054469 (Lclat1)
lysocardiolipin acyltransferase 1 		ENSMUST00000067545 (Lclat1-001) 73107994-73243368 protein_coding
ENSMUST00000130574 (Lclat1-002) 73107985-73161991 protein_coding
ENSMUST00000131335 (Lclat1-004) 73162989-73239908 processed_transcript
ENSMUST00000134149 (Lclat1-005) 73204150-73240371 processed_transcript
ENSMUST00000149064 (Lclat1-003) 73107988-73196778 protein_coding
ENSMUSG00000081492 (Gm9311)
predicted gene 9311 		ENSMUST00000118042 (Gm9311-001) 73190258-73191685 processed_pseudogene
ENSMUSG00000088224 (Gm25406)
predicted gene, 25406 		ENSMUST00000157599 (Gm25406-201) 73193912-73194016 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00099K_0001ENSG00000119801ENST00000261353ENST00000379519ENST00000379520ENST00000402708ENST00000470120ENST00000492439ENSG00000172954ENST00000309052ENST00000319406ENST00000379509ENST00000476535ENST00000491680ENSG00000213626ENST00000395323ENST00000407930ENST00000484150ENSG00000221377ENST00000408450ENSG00000233862ENST00000420016ENST00000455424ENSG00000235997ENST00000421976ENSG00000280154ENST00000624149CIL_00099K_0002ENSMUSG00000024063ENSMUST00000024857ENSMUSG00000039770ENSMUST00000045174ENSMUSG00000043705ENSMUST00000095208ENSMUSG00000054469ENSMUST00000067545ENSMUST00000130574ENSMUST00000149064ENSMUSG00000081492ENSMUST00000118042ENSMUSG00000088224ENSMUST00000157599
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119801 ENST00000261353 37.386±0.00 30.049±0.00 7.718±0.00 38.054±7.76 20.745±9.77 15.877±7.00 9.707±5.69 17.961±10.45 14.036±3.87 19.267±5.11 8.911±4.69 16.176±9.98 20.451±4.98 19.545±0.00
ENST00000379519 N/A N/A 5.023±0.00 N/A 1.976±0.00 5.730±0.00 1.152±0.00 N/A 5.423±0.00 7.185±3.07 N/A 3.215±0.25 4.842±1.38 14.444±1.77
ENST00000379520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.613±0.00
ENST00000402003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402708 N/A N/A N/A N/A N/A N/A 11.818±0.00 14.748±0.00 N/A 29.858±0.00 8.440±0.00 16.453±0.00 21.902±10.88 52.166±28.88
ENST00000470120 N/A N/A N/A N/A 9.584±0.00 31.276±0.00 N/A 13.771±0.00 N/A N/A 13.984±0.00 N/A N/A N/A
ENST00000482474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.740±0.00
ENST00000495673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172954 ENST00000309052 N/A 0.560±0.00 N/A 0.880±0.00 N/A N/A 1.632±0.00 N/A 0.676±0.00 N/A N/A 0.810±0.00 N/A 1.087±0.00
ENST00000319406 N/A 1.212±0.00 N/A 0.694±0.00 0.439±0.00 N/A 1.201±0.00 0.637±0.00 0.420±0.00 N/A N/A 0.533±0.13 N/A 0.787±0.00
ENST00000379509 0.508±0.00 1.729±0.00 1.762±0.00 0.740±0.46 1.173±0.78 2.273±0.98 3.576±0.61 2.700±0.66 0.805±0.05 1.400±0.10 N/A 1.868±0.98 0.557±0.18 5.049±0.00
ENST00000465200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476535 N/A N/A N/A 6.728±0.00 6.747±0.00 N/A N/A N/A 5.686±0.00 3.663±0.00 N/A 7.114±0.00 N/A N/A
ENST00000478015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491680 N/A N/A 1.223±0.00 0.920±0.00 N/A N/A N/A N/A 1.027±0.00 N/A N/A 1.640±0.00 N/A N/A
ENST00000497423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213626 ENST00000395323 10.881±0.00 45.934±0.00 4.659±0.00 2.683±1.24 10.465±4.12 6.614±1.86 25.054±14.21 8.379±7.00 3.761±0.93 38.046±20.20 3.069±1.66 43.637±47.24 37.428±14.06 14.772±9.39
ENST00000401506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000407930 N/A N/A N/A N/A N/A N/A N/A 1.121±0.00 N/A N/A N/A N/A N/A N/A
ENST00000412933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484150 N/A N/A N/A N/A N/A N/A N/A 3.558±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000221377 ENST00000408450 N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233862 ENST00000420016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.131±0.00
ENST00000453606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455424 0.164±0.00 0.371±0.00 N/A 0.160±0.13 0.107±0.06 0.081±0.01 0.071±0.02 0.160±0.00 0.058±0.04 0.126±0.00 0.045±0.01 0.053±0.02 0.081±0.00 0.699±0.25
ENSG00000235997 ENST00000421976 0.108±0.00 0.833±0.00 0.549±0.00 0.018±0.01 0.283±0.14 0.108±0.01 3.515±1.96 1.548±0.00 0.063±0.03 1.304±0.46 0.065±0.03 0.667±0.52 0.092±0.00 0.315±0.25
ENSG00000280154 ENST00000624149 0.096±0.00 N/A N/A 0.201±0.00 N/A N/A N/A N/A 0.096±0.00 N/A 0.573±0.00 N/A N/A 0.184±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024063 ENSMUST00000024857 32.658±13.20 18.805±1.28 20.477±4.95 34.512±21.03 51.140±14.84 33.284±9.17 229.342±26.60 31.930±0.71 6.757±1.55 119.734±13.99 2.914±1.08 64.592±30.39 2.681±1.60 1.476±0.75
ENSMUST00000148556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039770 ENSMUST00000045174 15.784±1.35 15.058±2.56 19.702±4.32 10.405±5.23 16.056±5.45 13.140±2.14 9.535±2.44 15.556±1.48 12.753±3.67 18.743±0.80 4.271±2.93 10.730±2.10 9.472±5.61 6.744±3.55
ENSMUSG00000043705 ENSMUST00000095208 0.094±0.06 N/A 8.725±1.12 0.019±0.00 0.058±0.01 10.375±2.57 0.077±0.05 0.337±0.16 0.014±0.01 0.244±0.19 0.063±0.00 0.042±0.02 0.011±0.01 0.197±0.13
ENSMUSG00000054469 ENSMUST00000067545 1.536±0.91 3.022±0.64 0.981±0.22 0.508±0.00 1.711±0.53 4.586±0.65 4.027±1.04 3.553±2.09 2.779±2.60 5.307±1.87 1.122±0.51 3.492±1.33 4.212±1.61 1.617±0.81
ENSMUST00000130574 13.433±3.38 10.535±1.23 N/A N/A 8.842±1.02 29.798±10.84 33.926±0.00 32.987±5.64 19.342±9.05 26.061±4.34 N/A 11.351±3.41 N/A 11.927±1.31
ENSMUST00000131335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149064 N/A 5.307±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.229±1.38 N/A 1.598±0.00
ENSMUSG00000081492 ENSMUST00000118042 0.287±0.14 0.243±0.13 0.048±0.02 0.023±0.00 0.420±0.13 0.469±0.18 0.269±0.08 0.225±0.20 0.186±0.12 0.314±0.02 0.026±0.00 0.534±0.35 0.048±0.03 0.116±0.06
ENSMUSG00000088224 ENSMUST00000157599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.594±0.00 N/A N/A

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