C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0009AH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1352 VISTA 9606 6:22879784-23481958
GeneTranscriptPositionBiotype
ENSG00000218476 (RP11-108N13.1)
ENST00000404015 (RP11-108N13.1-001) 23102680-23103546 processed_pseudogene
ENSG00000233358 (RP1-209A6.1)
ENST00000420572 (RP1-209A6.1-001) 22744395-23031780 lincRNA
ENSG00000235743 (RP11-439H9.1)
ENST00000431001 (RP11-439H9.1-001) 23337711-23346560 lincRNA
CIL_0009AH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1352 VISTA 10090 13:25853953-26456126
GeneTranscriptPositionBiotype
ENSMUSG00000084811 (1700092E19Rik)
RIKEN cDNA 1700092E19 gene
ENSMUST00000123438 (1700092E19Rik-002) 26305750-26312347 lincRNA
ENSMUST00000154703 (1700092E19Rik-001) 26284151-26312406 lincRNA
ENSMUSG00000086531 (Gm11351)
predicted gene 11351
ENSMUST00000139335 (Gm11351-001) 25921033-25930941 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; BreastKidneyOvaryPlacentaTestisCIL_0009AH_0001ENSG00000218476ENST00000404015ENSG00000233358ENST00000420572ENSG00000235743ENST00000431001CIL_0009AH_0002ENSMUSG00000084811ENSMUST00000123438ENSMUST00000154703ENSMUSG00000086531ENSMUST00000139335
Region; Gene Transcript'; BreastKidneyOvaryPlacentaTestisCIL_0009AH_0001ENSG00000218476ENST00000404015ENSG00000233358ENST00000420572ENSG00000235743ENST00000431001CIL_0009AH_0002ENSMUSG00000084811ENSMUST00000123438ENSMUST00000154703ENSMUSG00000086531ENSMUST00000139335
Gene Transcript Breast Kidney Ovary Placenta Testis
ENSG00000218476 ENST00000404015 0.143±0.00 N/A N/A N/A N/A
ENSG00000233358 ENST00000420572 N/A N/A N/A N/A 0.142±0.00
ENSG00000235743 ENST00000431001 N/A N/A N/A N/A 0.253±0.00
Gene Transcript Breast Kidney Ovary Placenta Testis
ENSMUSG00000084811 ENSMUST00000123438 N/A N/A N/A N/A 4.772±1.47
ENSMUST00000154703 N/A 0.090±0.03 N/A N/A 16.323±2.92
ENSMUSG00000086531 ENSMUST00000139335 N/A 0.109±0.00 0.092±0.00 0.046±0.04 0.726±0.49

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