C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009CW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1075 VISTA 9606 14:27629357-28231415
GeneTranscriptPositionBiotype
ENSG00000258548 (LINC00645)
long intergenic non-protein coding RNA 645 		ENST00000555350 (LINC00645-003) 27634125-27636669 lincRNA
ENST00000557359 (LINC00645-002) 27612588-27639636 lincRNA
ENST00000557399 (LINC00645-001) 27612611-27639636 lincRNA
ENSG00000258932 (CTD-3006G17.2)
 ENST00000553392 (CTD-3006G17.2-002) 27259142-27673230 processed_transcript
ENST00000554904 (CTD-3006G17.2-003) 27321826-27673221 processed_transcript
ENST00000555797 (CTD-3006G17.2-004) 27322079-27845286 processed_transcript
ENST00000556395 (CTD-3006G17.2-001) 27258717-27259166 transcribed_processed_pseudogene
ENST00000556890 (CTD-3006G17.2-005) 27321922-27673221 processed_transcript
CIL_0009CW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1075 VISTA 10090 12:48087871-48689934
GeneTranscriptPositionBiotype
ENSMUSG00000091277 (Gm1818)
predicted gene 1818 		ENSMUST00000169406 (Gm1818-201) 48554182-48559971 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009CW_0001ENSG00000258548ENST00000555350ENST00000557359ENST00000557399ENSG00000258932ENST00000553392ENST00000554904ENST00000555797ENST00000556395ENST00000556890CIL_0009CW_0002ENSMUSG00000091277ENSMUST00000169406
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009CW_0001ENSG00000258548ENST00000555350ENST00000557359ENST00000557399ENSG00000258932ENST00000553392ENST00000554904ENST00000555797ENST00000556395ENST00000556890CIL_0009CW_0002ENSMUSG00000091277ENSMUST00000169406
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000258548 ENST00000555350 N/A N/A N/A 0.144±0.00 0.386±0.00 N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A 0.284±0.00
ENST00000557359 N/A N/A 1.712±0.00 0.017±0.01 N/A N/A 0.002±0.00 3.310±0.00 N/A N/A N/A 0.053±0.00 0.010±0.00 0.042±0.00
ENST00000557399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.001±0.00 N/A
ENSG00000258932 ENST00000553392 N/A N/A N/A 0.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A
ENST00000554904 N/A N/A N/A N/A 0.175±0.00 N/A N/A N/A N/A N/A N/A 0.175±0.10 0.243±0.06 0.878±0.00
ENST00000555797 N/A N/A N/A N/A 0.069±0.00 N/A 0.162±0.00 0.035±0.00 N/A N/A N/A N/A N/A N/A
ENST00000556395 N/A N/A N/A N/A N/A N/A 0.156±0.00 N/A N/A N/A N/A N/A 0.117±0.01 N/A
ENST00000556890 N/A 0.458±0.00 N/A 0.395±0.00 0.125±0.00 N/A 0.041±0.00 0.065±0.00 0.019±0.00 N/A N/A N/A 0.347±0.13 0.449±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000091277 ENSMUST00000169406 0.284±0.02 0.978±0.49 1.173±0.87 0.525±0.33 0.315±0.11 0.234±0.09 0.410±0.09 0.404±0.11 0.383±0.33 0.300±0.09 0.220±0.05 0.156±0.08 0.090±0.05 0.171±0.05

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