C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY-box containing gene 21 b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000003310 sox21b-001 ENSDARG00000008540 7955 + 9:55102198-55103564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000003310
Transcript ID Brain Heart Kidney Muscle
ENSDART00000003310 5.832±1.76 0.053±0.00 0.064±0.00 0.388±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KH CIL_0007KH_0003 UCNEbase 9:54990397-55145709

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0002088 IMP lens development in camera-type eye
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 ISS sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046565 Arx-001 protein_coding Mus_musculus 0.000002 58
ENSMUST00000113947 Arx-002 protein_coding Mus_musculus 0.000002 58
ENST00000376945 SOX21-001 protein_coding Homo_sapiens 0 274

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