C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: estrogen-related receptor gamma a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000009104 esrrga-001 ENSDARG00000004861 7955 - 17:29856986-29961297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSDART00000009104
Transcript ID Liver
ENSDART00000009104 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000127 CIL_000127_0001 CGP 17:29435964-29961297
CIL_0007JY CIL_0007JY_0004 UCNEbase 17:29456098-30423974

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005496 IEA steroid binding
GO:0005634 IEA nucleus
GO:0006351 IDA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021680 Esrrb-006 protein_coding Mus_musculus 0 619
ENSMUST00000027906 Esrrg-001 protein_coding Mus_musculus 0 1064
ENSMUST00000110203 Esrrb-003 protein_coding Mus_musculus 0 446
ENSMUST00000110204 Esrrb-002 protein_coding Mus_musculus 0 619
ENSMUST00000110938 Esrrg-002 protein_coding Mus_musculus 0 1064
ENSMUST00000110939 Esrrg-003 protein_coding Mus_musculus 0 1072
ENSMUST00000116402 Esrrb-001 protein_coding Mus_musculus 0 619
ENSMUST00000167891 Esrrb-005 protein_coding Mus_musculus 0 619
ENST00000380887 ESRRB-003 protein_coding Homo_sapiens 0 782
ENST00000505752 ESRRB-001 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000509242 ESRRB-201 protein_coding Homo_sapiens 0 782
ENST00000512784 ESRRB-002 protein_coding Homo_sapiens 0 782
ENST00000556177 ESRRB-006 protein_coding Homo_sapiens 0 785

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