C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high-mobility group box 3b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000024750 hmgb3b-001 ENSDARG00000006408 7955 + 21:33085576-33095593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000024750
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000024750 18.470±1.35 43.086±25.30 75.926±27.17 3.995±0.00 12.372±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000417997 HMGB3P20-001 processed_pseudogene Homo_sapiens 3.00004e-41 172
ENST00000434734 HMGB3P10-001 processed_pseudogene Homo_sapiens 2e-27 126
ENST00000441799 HMGB3P9-001 processed_pseudogene Homo_sapiens 0.00000000000001 84
ENST00000588063 RP11-861E21.3-001 processed_pseudogene Homo_sapiens 2e-32 143

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