C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin 18, type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000025562 cdh18-002 ENSDARG00000061371 7955 + 2:28972807-29067510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000025562
Transcript ID Brain Heart Kidney Liver
ENSDART00000025562 3.029±2.25 0.079±0.00 0.530±0.00 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XA CIL_0003XA_0002 CGP 2:28710608-29067510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274170 CDH18-201 protein_coding Homo_sapiens 0 503
ENST00000382275 CDH18-001 protein_coding Homo_sapiens 0 503
ENST00000502796 CDH18-003 protein_coding Homo_sapiens 0 435
ENST00000506372 CDH18-004 protein_coding Homo_sapiens 0 435
ENST00000507958 CDH18-005 protein_coding Homo_sapiens 0 503
ENST00000511273 CDH18-002 protein_coding Homo_sapiens 0 431

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