C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B', alpha isoform
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000025644 ppp2r5a-001 ENSDARG00000027017 7955 + 20:13090153-13226692 protein_coding

Danio rerio EnsemblZv9

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000025644
Transcript ID Brain Heart Kidney Liver
ENSDART00000025644 2.263±0.72 3.807±0.72 1.057±0.12 0.183±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000129 CIL_000129_0001 CGP 20:13056182-13226692

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 IEA protein phosphatase type 2A complex
GO:0005488 IEA binding
GO:0007165 IEA signal transduction
GO:0008601 IEA protein phosphatase type 2A regulator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328724 PPP2R5C-002 protein_coding Homo_sapiens 8.96831e-44 183
ENST00000334743 PPP2R5C-001 protein_coding Homo_sapiens 9.94922e-44 183
ENST00000350249 PPP2R5C-005 protein_coding Homo_sapiens 8.96831e-44 183
ENST00000422945 PPP2R5C-201 protein_coding Homo_sapiens 9.94922e-44 183
ENST00000445439 PPP2R5C-006 protein_coding Homo_sapiens 2.94273e-44 183
ENST00000556218 PPP2R5C-012 processed_transcript Homo_sapiens 2e-39 167
ENST00000556570 PPP2R5C-029 processed_transcript Homo_sapiens 5e-28 128
ENST00000557095 PPP2R5C-009 protein_coding Homo_sapiens 3.9937e-43 180
ENST00000557268 PPP2R5C-003 protein_coding Homo_sapiens 4.06377e-44 183
ENST00000557534 PPP2R5C-010 nonsense_mediated_decay Homo_sapiens 2e-23 113
ENST00000557621 PPP2R5C-026 protein_coding Homo_sapiens 3e-22 110

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