C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride intracellular channel 5a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000035944 clic5a-001 ENSDARG00000075993 7955 - 17:5308388-5325595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000035944
Transcript ID Brain Heart Kidney Muscle
ENSDART00000035944 0.164±0.08 7.830±3.08 2.333±0.67 54.975±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008A CIL_00008A_0001 CGP 17:5094172-5325595
CIL_00008G CIL_00008G_0001 CGP 17:5308388-5352764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005247 IEA voltage-gated chloride channel activity
GO:0006821 IEA chloride transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374379 CLIC4-001 protein_coding Homo_sapiens 0 220
ENST00000488683 CLIC4-002 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000489758 CLIC4-004 processed_transcript Homo_sapiens 1e-24 117

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