C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, beta 4B class IVb
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000041279 tubb4b-001 ENSDARG00000002344 7955 + 14:5867604-5871315 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000041279
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000041279 176.744±175.26 150.742±141.73 75.627±69.64 41.845±0.00 234.587±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 1062
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 1269
ENSMUST00000043584 Tubb4b-001 protein_coding Mus_musculus 0 1245
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 1232
ENSMUST00000071134 Tubb3-001 protein_coding Mus_musculus 0 1103
ENSMUST00000071135 Tubb4a-201 protein_coding Mus_musculus 0 1133
ENSMUST00000121633 Gm8908-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000160140 Gm16165-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000179460 Tubb4b-ps1-201 protein_coding Mus_musculus 0 1230
ENST00000259818 TUBB2B-001 protein_coding Homo_sapiens 0 1367
ENST00000264071 TUBB4A-001 protein_coding Homo_sapiens 0 1238
ENST00000308911 RP11-683L23.1-201 protein_coding Homo_sapiens 0 861
ENST00000315491 TUBB3-001 protein_coding Homo_sapiens 0 1147
ENST00000317702 TUBB6-001 protein_coding Homo_sapiens 0 1066
ENST00000327892 TUBB-001 protein_coding Homo_sapiens 0 1260
ENST00000330914 TUBB-002 protein_coding Homo_sapiens 0 1201
ENST00000333628 TUBB2A-001 protein_coding Homo_sapiens 0 1356
ENST00000340384 TUBB4B-001 protein_coding Homo_sapiens 0 1219
ENST00000383564 TUBB-001 protein_coding Homo_sapiens 0 1260
ENST00000396384 TUBB-004 protein_coding Homo_sapiens 0 1203
ENST00000396389 TUBB-003 protein_coding Homo_sapiens 0 1194
ENST00000400530 TUBB-004 protein_coding Homo_sapiens 0 1203
ENST00000400531 TUBB-002 protein_coding Homo_sapiens 0 1201
ENST00000400534 TUBB-003 protein_coding Homo_sapiens 0 1194
ENST00000405796 TUBB3P1-001 processed_pseudogene Homo_sapiens 0 736
ENST00000412136 TUBB-003 protein_coding Homo_sapiens 0 1194
ENST00000413547 TUBB-002 protein_coding Homo_sapiens 0 1201
ENST00000415481 TUBB8P11-001 unprocessed_pseudogene Homo_sapiens 0 756
ENST00000417736 TUBB6-002 retained_intron Homo_sapiens 0 1020
ENST00000419551 TUBB-003 protein_coding Homo_sapiens 0 1194
ENST00000419792 TUBB-001 protein_coding Homo_sapiens 0 1260
ENST00000420400 TUBB-003 protein_coding Homo_sapiens 0 1194
ENST00000420618 TUBB-004 protein_coding Homo_sapiens 0 1203
ENST00000421473 TUBB-001 protein_coding Homo_sapiens 0 1260
ENST00000422650 TUBB-001 protein_coding Homo_sapiens 0 1260
ENST00000422674 TUBB-001 protein_coding Homo_sapiens 0 1260
ENST00000424734 TUBB-003 protein_coding Homo_sapiens 0 1194
ENST00000425102 TUBB-004 protein_coding Homo_sapiens 0 1203
ENST00000425136 TUBB-003 protein_coding Homo_sapiens 0 1194
ENST00000426754 TUBB-003 protein_coding Homo_sapiens 0 1194
ENST00000427480 TUBB-002 protein_coding Homo_sapiens 0 1201
ENST00000432462 TUBB-001 protein_coding Homo_sapiens 0 1260
ENST00000435546 TUBB-002 protein_coding Homo_sapiens 0 1201
ENST00000436335 TUBB-002 protein_coding Homo_sapiens 0 1201
ENST00000436628 TUBB-001 protein_coding Homo_sapiens 0 1260
ENST00000437490 TUBB-002 protein_coding Homo_sapiens 0 1201
ENST00000437546 TUBB4BP3-001 processed_pseudogene Homo_sapiens 0 206
ENST00000444441 TUBB-004 protein_coding Homo_sapiens 0 1203
ENST00000446385 TUBB-004 protein_coding Homo_sapiens 0 1203
ENST00000453350 TUBB-004 protein_coding Homo_sapiens 0 1203
ENST00000454403 TUBBP2-001 processed_pseudogene Homo_sapiens 0 405
ENST00000454454 TUBB-002 protein_coding Homo_sapiens 0 1201
ENST00000454620 TUBB-004 protein_coding Homo_sapiens 0 1203
ENST00000458717 TUBB8P8-001 unprocessed_pseudogene Homo_sapiens 0 750
ENST00000473006 TUBB2B-002 processed_transcript Homo_sapiens 0 1314
ENST00000540257 TUBB4A-201 protein_coding Homo_sapiens 0 1238
ENST00000554444 TUBB3-002 protein_coding Homo_sapiens 0 1086
ENST00000555609 TUBB3-013 nonsense_mediated_decay Homo_sapiens 0 1059
ENST00000555810 TUBB3-004 protein_coding Homo_sapiens 0 479
ENST00000556536 TUBB3-012 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000556922 TUBB3-001 protein_coding Homo_sapiens 0 1085
ENST00000557490 TUBB3-014 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000561967 TUBB8-007 protein_coding Homo_sapiens 0 817
ENST00000564130 TUBB8-005 protein_coding Homo_sapiens 0 778
ENST00000568584 TUBB8-001 protein_coding Homo_sapiens 0 900
ENST00000568866 TUBB8-008 protein_coding Homo_sapiens 0 780
ENST00000573909 RP11-683L23.1-002 protein_coding Homo_sapiens 0 761
ENST00000586810 TUBB6-003 nonsense_mediated_decay Homo_sapiens 0 593
ENST00000590103 TUBB6-008 protein_coding Homo_sapiens 0 747
ENST00000591208 TUBB6-005 protein_coding Homo_sapiens 0 891
ENST00000594075 TUBB4A-009 protein_coding Homo_sapiens 0 309
ENST00000594276 TUBB4A-010 protein_coding Homo_sapiens 0 279
ENST00000595324 TUBB4A-011 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000600216 TUBB4A-015 protein_coding Homo_sapiens 0 326
ENST00000601152 TUBB4A-007 protein_coding Homo_sapiens 0 329
ENST00000604929 TUBB4B-002 retained_intron Homo_sapiens 0 1026

Loading