C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000047529 acap3b-201 ENSDARG00000039386 7955 + 11:3367329-3407273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000047529
Transcript ID Heart Kidney Liver Muscle
ENSDART00000047529 0.116±0.00 2.307±0.00 0.204±0.00 0.197±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059X CIL_00059X_0001 CGP 11:3367329-3582851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079031 Acap3-001 protein_coding Mus_musculus 0 597
ENSMUST00000105584 Acap3-201 protein_coding Mus_musculus 0 641
ENSMUST00000137726 Acap3-002 processed_transcript Mus_musculus 0 597
ENSMUST00000140902 Acap3-005 retained_intron Mus_musculus 0 281

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